RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 FAM3BP58499 235 aaPredicted RBP9.47□□□□□ -0.89
CPNE3-205ENST00000522240 ZNF415Q09FC8 603 aa9.47□□□□□ -0.89
CPNE3-205ENST00000522240 Q6ZWC4 215 aa9.47□□□□□ -0.89
CPNE3-205ENST00000522240 ATP5L2Q7Z4Y8 100 aa9.47□□□□□ -0.89
CPNE3-205ENST00000522240 BORCS7Q96B45 105 aa9.47□□□□□ -0.89
CPNE3-205ENST00000522240 C9orf85Q96MD7 179 aa9.47□□□□□ -0.89
CPNE3-205ENST00000522240 H3BVH4 76 aa9.46□□□□□ -0.9
CPNE3-205ENST00000522240 GNRH2O43555 120 aa9.46□□□□□ -0.9
CPNE3-205ENST00000522240 RNASE3P12724 160 aaKnown RBP9.46□□□□□ -0.9
CPNE3-205ENST00000522240 WDR73Q6P4I2 378 aa9.46□□□□□ -0.9
CPNE3-205ENST00000522240 TMEM263Q8WUH6 116 aaKnown RBP9.46□□□□□ -0.9
CPNE3-205ENST00000522240 SCRT2Q9NQ03 307 aa9.46□□□□□ -0.9
CPNE3-205ENST00000522240 IGHV3OR16-12A0A075B7B8 117 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 A0A1B0GUT8 65 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 A0A1B0GW15 77 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 SMIM9A6NGZ8 99 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 ARMS2P0C7Q2 107 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 CACNG7P62955 275 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 DEFB135Q30KP9 77 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 RASL11AQ6T310 242 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 LYZL1Q6UWQ5 148 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 ZNF493Q6ZR52 646 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 IL17DQ8TAD2 202 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 RNASE8Q8TDE3 154 aaKnown RBP9.45□□□□□ -0.9
CPNE3-205ENST00000522240 C16orf74Q96GX8 76 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 PGLYRP4Q96LB8 373 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 RCHY1Q96PM5 261 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 TPPP3Q9BW30 176 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 TP53TG1Q9Y2A0 90 aa9.45□□□□□ -0.9
CPNE3-205ENST00000522240 A0A1B0GXF2 115 aa9.44□□□□□ -0.9
CPNE3-205ENST00000522240 NXPH4O95158 308 aa9.44□□□□□ -0.9
CPNE3-205ENST00000522240 RIGQ13278 110 aa9.44□□□□□ -0.9
CPNE3-205ENST00000522240 RRN3P1Q2M238 152 aa9.44□□□□□ -0.9
CPNE3-205ENST00000522240 COX19Q49B96 90 aa9.44□□□□□ -0.9
CPNE3-205ENST00000522240 C11orf72Q8NBR9 251 aa9.44□□□□□ -0.9
CPNE3-205ENST00000522240 RNF183Q96D59 192 aa9.44□□□□□ -0.9
CPNE3-205ENST00000522240 MDFICQ9P1T7 246 aa9.44□□□□□ -0.9
CPNE3-205ENST00000522240 NBEAL2Q6ZNJ1 2754 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 IGHV4-4A0A075B6R2 117 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 TGIF2-C20orf24A0A0A6YYL0 155 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 COLCA2A8K830 154 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 PRB2P02812 416 aaPredicted RBP9.43□□□□□ -0.9
CPNE3-205ENST00000522240 S100A8P05109 93 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 HTN1P15515 57 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 HBBP68871 147 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 PIK3CD-AS1Q5SR53 167 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 ZFP82Q8N141 532 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 FAM210BQ96KR6 192 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 SPXQ9BT56 116 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 PHLDA3Q9Y5J5 127 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 X6R8D5 127 aa9.43□□□□□ -0.9
CPNE3-205ENST00000522240 MRPL54Q6P161 138 aaKnown RBP9.42□□□□□ -0.9
CPNE3-205ENST00000522240 GATD1Q8NB37 220 aa9.42□□□□□ -0.9
CPNE3-205ENST00000522240 SYT8Q8NBV8 401 aa9.42□□□□□ -0.9
CPNE3-205ENST00000522240 OR10AG1Q8NH19 301 aa9.42□□□□□ -0.9
CPNE3-205ENST00000522240 PTH2Q96A98 100 aa9.42□□□□□ -0.9
CPNE3-205ENST00000522240 NDUFAF3Q9BU61 184 aa9.42□□□□□ -0.9
CPNE3-205ENST00000522240 SPRY2O43597 315 aa9.41□□□□□ -0.9
CPNE3-205ENST00000522240 MIFP14174 115 aa9.41□□□□□ -0.9
CPNE3-205ENST00000522240 AZU1P20160 251 aa9.41□□□□□ -0.9
CPNE3-205ENST00000522240 DAZ2Q13117 558 aaKnown RBP9.41□□□□□ -0.9
CPNE3-205ENST00000522240 SPANXN1Q5VSR9 72 aa9.41□□□□□ -0.9
CPNE3-205ENST00000522240 GSN-AS1Q9NRJ2 163 aa9.41□□□□□ -0.9
CPNE3-205ENST00000522240 TIMM8BQ9Y5J9 83 aaPredicted RBP9.41□□□□□ -0.9
CPNE3-205ENST00000522240 PLAC8L1A1L4L8 177 aa9.4□□□□□ -0.9
CPNE3-205ENST00000522240 SNURFLB1AK76 121 aa9.4□□□□□ -0.9
CPNE3-205ENST00000522240 M0R2P5 195 aa9.4□□□□□ -0.9
CPNE3-205ENST00000522240 SPINK4O60575 86 aa9.4□□□□□ -0.9
CPNE3-205ENST00000522240 MT-ND6P03923 174 aa9.4□□□□□ -0.9
CPNE3-205ENST00000522240 PRM2P04554 102 aa9.4□□□□□ -0.9
CPNE3-205ENST00000522240 TRGC1P0CF51 173 aa9.4□□□□□ -0.9
CPNE3-205ENST00000522240 OR11H2Q8NH07 326 aa9.4□□□□□ -0.9
CPNE3-205ENST00000522240 M0R381 172 aa9.39□□□□□ -0.91
CPNE3-205ENST00000522240 HLA-DQA1P01909 254 aa9.39□□□□□ -0.91
CPNE3-205ENST00000522240 RAB5AP20339 215 aa9.39□□□□□ -0.91
CPNE3-205ENST00000522240 NTF3P20783 257 aa9.39□□□□□ -0.91
CPNE3-205ENST00000522240 TWIST1Q15672 202 aa9.39□□□□□ -0.91
CPNE3-205ENST00000522240 AP1S3Q96PC3 154 aa9.39□□□□□ -0.91
CPNE3-205ENST00000522240 OVOL2Q9BRP0 275 aa9.39□□□□□ -0.91
CPNE3-205ENST00000522240 GNB1LQ9BYB4 327 aa9.39□□□□□ -0.91
CPNE3-205ENST00000522240 MUC21A0A0G2JKD1 596 aa9.38□□□□□ -0.91
CPNE3-205ENST00000522240 MUC21A0A140T8X8 626 aa9.38□□□□□ -0.91
CPNE3-205ENST00000522240 LGALS9BQ3B8N2 356 aa9.38□□□□□ -0.91
CPNE3-205ENST00000522240 TMEM136Q6ZRR5 245 aa9.38□□□□□ -0.91
CPNE3-205ENST00000522240 SMIM15Q7Z3B0 74 aa9.38□□□□□ -0.91
CPNE3-205ENST00000522240 Q8NAQ8 132 aa9.38□□□□□ -0.91
CPNE3-205ENST00000522240 MRAPQ8TCY5 172 aa9.38□□□□□ -0.91
CPNE3-205ENST00000522240 SPATA25Q9BR10 227 aa9.38□□□□□ -0.91
CPNE3-205ENST00000522240 TM2D3Q9BRN9 247 aa9.38□□□□□ -0.91
CPNE3-205ENST00000522240 TMEM191AQ9H0A3 160 aa9.38□□□□□ -0.91
CPNE3-205ENST00000522240 IGHV4-28A0A0C4DH34 117 aa9.37□□□□□ -0.91
CPNE3-205ENST00000522240 CAMPP49913 170 aa9.37□□□□□ -0.91
CPNE3-205ENST00000522240 ZNF876PQ49A33 203 aa9.37□□□□□ -0.91
CPNE3-205ENST00000522240 DEFB121Q5J5C9 76 aa9.37□□□□□ -0.91
CPNE3-205ENST00000522240 SBSPONQ8IVN8 264 aa9.37□□□□□ -0.91
CPNE3-205ENST00000522240 MUC4Q99102 2169 aa9.37□□□□□ -0.91
CPNE3-205ENST00000522240 LYRM9A8MSI8 78 aa9.36□□□□□ -0.91
CPNE3-205ENST00000522240 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.36□□□□□ -0.91
CPNE3-205ENST00000522240 RASL10AQ92737 203 aa9.36□□□□□ -0.91
CPNE3-205ENST00000522240 C11orf68Q9H3H3 251 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms