RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 EMP1P54849 157 aa12.69□□□□□ -0.38
IGHV3-52-201ENST00000519770 SMIM15Q7Z3B0 74 aa12.69□□□□□ -0.38
IGHV3-52-201ENST00000519770 ZFP82Q8N141 532 aa12.69□□□□□ -0.38
IGHV3-52-201ENST00000519770 NUP35Q8NFH5 326 aa12.69□□□□□ -0.38
IGHV3-52-201ENST00000519770 RNASE8Q8TDE3 154 aaKnown RBP12.69□□□□□ -0.38
IGHV3-52-201ENST00000519770 B9D2Q9BPU9 175 aa12.69□□□□□ -0.38
IGHV3-52-201ENST00000519770 M0R2P5 195 aa12.68□□□□□ -0.38
IGHV3-52-201ENST00000519770 SNAI2O43623 268 aa12.68□□□□□ -0.38
IGHV3-52-201ENST00000519770 RNASE3P12724 160 aaKnown RBP12.68□□□□□ -0.38
IGHV3-52-201ENST00000519770 CTRLP40313 264 aa12.68□□□□□ -0.38
IGHV3-52-201ENST00000519770 SSTP61278 116 aa12.68□□□□□ -0.38
IGHV3-52-201ENST00000519770 WDR73Q6P4I2 378 aa12.68□□□□□ -0.38
IGHV3-52-201ENST00000519770 TMEM88Q6PEY1 159 aa12.68□□□□□ -0.38
IGHV3-52-201ENST00000519770 C9orf85Q96MD7 179 aa12.68□□□□□ -0.38
IGHV3-52-201ENST00000519770 SSBP4Q9BWG4 385 aaPredicted RBP12.68□□□□□ -0.38
IGHV3-52-201ENST00000519770 A0A1B0GW15 77 aa12.67□□□□□ -0.38
IGHV3-52-201ENST00000519770 M0R381 172 aa12.67□□□□□ -0.38
IGHV3-52-201ENST00000519770 SPINK4O60575 86 aa12.67□□□□□ -0.38
IGHV3-52-201ENST00000519770 TWIST1Q15672 202 aa12.67□□□□□ -0.38
IGHV3-52-201ENST00000519770 C11orf72Q8NBR9 251 aa12.67□□□□□ -0.38
IGHV3-52-201ENST00000519770 TM2D3Q9BRN9 247 aa12.67□□□□□ -0.38
IGHV3-52-201ENST00000519770 RETNQ9HD89 108 aa12.67□□□□□ -0.38
IGHV3-52-201ENST00000519770 IGHV4-28A0A0C4DH34 117 aa12.66□□□□□ -0.38
IGHV3-52-201ENST00000519770 DAZ2Q13117 558 aaKnown RBP12.66□□□□□ -0.38
IGHV3-52-201ENST00000519770 ZNF876PQ49A33 203 aa12.66□□□□□ -0.38
IGHV3-52-201ENST00000519770 ATP5L2Q7Z4Y8 100 aa12.66□□□□□ -0.38
IGHV3-52-201ENST00000519770 CBLN2Q8IUK8 224 aa12.66□□□□□ -0.38
IGHV3-52-201ENST00000519770 NOP10Q9NPE3 64 aaKnown RBP12.66□□□□□ -0.38
IGHV3-52-201ENST00000519770 SCRT2Q9NQ03 307 aa12.66□□□□□ -0.38
IGHV3-52-201ENST00000519770 CMYA5Q8N3K9 4069 aa12.66□□□□□ -0.38
IGHV3-52-201ENST00000519770 MUC21A0A0G2JKD1 596 aa12.65□□□□□ -0.38
IGHV3-52-201ENST00000519770 MUC21A0A140T8X8 626 aa12.65□□□□□ -0.38
IGHV3-52-201ENST00000519770 TEX48A0A1B0GUV7 120 aa12.65□□□□□ -0.38
IGHV3-52-201ENST00000519770 TRGC1P0CF51 173 aa12.65□□□□□ -0.38
IGHV3-52-201ENST00000519770 NHLRC4P0CG21 123 aaPredicted RBP12.65□□□□□ -0.38
IGHV3-52-201ENST00000519770 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
IGHV3-52-201ENST00000519770 OR10AG1Q8NH19 301 aa12.65□□□□□ -0.38
IGHV3-52-201ENST00000519770 TRGV1A0A0A0MS02 117 aa12.64□□□□□ -0.39
IGHV3-52-201ENST00000519770 SCO1O75880 301 aa12.64□□□□□ -0.39
IGHV3-52-201ENST00000519770 SMIM17P0DL12 118 aa12.64□□□□□ -0.39
IGHV3-52-201ENST00000519770 NTF3P20783 257 aa12.64□□□□□ -0.39
IGHV3-52-201ENST00000519770 COX19Q49B96 90 aa12.64□□□□□ -0.39
IGHV3-52-201ENST00000519770 MRPL54Q6P161 138 aaKnown RBP12.64□□□□□ -0.39
IGHV3-52-201ENST00000519770 ZNF575Q86XF7 245 aa12.64□□□□□ -0.39
IGHV3-52-201ENST00000519770 PTH2Q96A98 100 aa12.64□□□□□ -0.39
IGHV3-52-201ENST00000519770 NDUFAF3Q9BU61 184 aa12.64□□□□□ -0.39
IGHV3-52-201ENST00000519770 LYRM9A8MSI8 78 aa12.63□□□□□ -0.39
IGHV3-52-201ENST00000519770 RAB4BP61018 213 aa12.63□□□□□ -0.39
IGHV3-52-201ENST00000519770 HBBP68871 147 aa12.63□□□□□ -0.39
IGHV3-52-201ENST00000519770 ELOBQ15370 118 aa12.63□□□□□ -0.39
IGHV3-52-201ENST00000519770 PIK3CD-AS1Q5SR53 167 aa12.63□□□□□ -0.39
IGHV3-52-201ENST00000519770 RASL11AQ6T310 242 aa12.63□□□□□ -0.39
IGHV3-52-201ENST00000519770 Q8NAQ8 132 aa12.63□□□□□ -0.39
IGHV3-52-201ENST00000519770 AP1S3Q96PC3 154 aa12.63□□□□□ -0.39
IGHV3-52-201ENST00000519770 CNFNQ9BYD5 112 aa12.63□□□□□ -0.39
IGHV3-52-201ENST00000519770 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
IGHV3-52-201ENST00000519770 SPART-AS1P0CW21 52 aa12.62□□□□□ -0.39
IGHV3-52-201ENST00000519770 CAMPP49913 170 aa12.62□□□□□ -0.39
IGHV3-52-201ENST00000519770 MRPL16Q9NX20 251 aaKnown RBP12.62□□□□□ -0.39
IGHV3-52-201ENST00000519770 NBEAL1Q6ZS30 2694 aa12.62□□□□□ -0.39
IGHV3-52-201ENST00000519770 TRBV24-1A0A075B6N3 115 aa12.61□□□□□ -0.39
IGHV3-52-201ENST00000519770 TRGV2A0A075B6R0 118 aa12.61□□□□□ -0.39
IGHV3-52-201ENST00000519770 A8MWV9 139 aa12.61□□□□□ -0.39
IGHV3-52-201ENST00000519770 DEFB4AO15263 64 aa12.61□□□□□ -0.39
IGHV3-52-201ENST00000519770 DMRTA1Q5VZB9 504 aa12.61□□□□□ -0.39
IGHV3-52-201ENST00000519770 FAM210BQ96KR6 192 aa12.61□□□□□ -0.39
IGHV3-52-201ENST00000519770 TGIF2-C20orf24A0A0A6YYL0 155 aa12.6□□□□□ -0.39
IGHV3-52-201ENST00000519770 NXPH4O95158 308 aa12.6□□□□□ -0.39
IGHV3-52-201ENST00000519770 IL17DQ8TAD2 202 aa12.6□□□□□ -0.39
IGHV3-52-201ENST00000519770 RASL10AQ92737 203 aa12.6□□□□□ -0.39
IGHV3-52-201ENST00000519770 C11orf68Q9H3H3 251 aaKnown RBP12.6□□□□□ -0.39
IGHV3-52-201ENST00000519770 GAGE12BA1L429 117 aa12.59□□□□□ -0.39
IGHV3-52-201ENST00000519770 PLAC8L1A1L4L8 177 aa12.59□□□□□ -0.39
IGHV3-52-201ENST00000519770 GAGE7O76087 117 aa12.59□□□□□ -0.39
IGHV3-52-201ENST00000519770 GAGE12FP0CL80 117 aa12.59□□□□□ -0.39
IGHV3-52-201ENST00000519770 GAGE12GP0CL81 117 aa12.59□□□□□ -0.39
IGHV3-52-201ENST00000519770 GAGE12IP0CL82 117 aa12.59□□□□□ -0.39
IGHV3-52-201ENST00000519770 FAM222AQ5U5X8 452 aa12.59□□□□□ -0.39
IGHV3-52-201ENST00000519770 Q6ZTI0 123 aa12.59□□□□□ -0.39
IGHV3-52-201ENST00000519770 DEFB130BP0DP73 79 aa12.58□□□□□ -0.4
IGHV3-52-201ENST00000519770 DEFB130AP0DP74 79 aa12.58□□□□□ -0.4
IGHV3-52-201ENST00000519770 DAD1P61803 113 aa12.58□□□□□ -0.4
IGHV3-52-201ENST00000519770 OR4C5Q8NGB2 326 aa12.58□□□□□ -0.4
IGHV3-52-201ENST00000519770 MSRB1Q9NZV6 116 aa12.58□□□□□ -0.4
IGHV3-52-201ENST00000519770 DKK2Q9UBU2 259 aa12.58□□□□□ -0.4
IGHV3-52-201ENST00000519770 RHODO00212 210 aa12.57□□□□□ -0.4
IGHV3-52-201ENST00000519770 CIDEAO60543 219 aa12.57□□□□□ -0.4
IGHV3-52-201ENST00000519770 MT-ND6P03923 174 aa12.57□□□□□ -0.4
IGHV3-52-201ENST00000519770 TMEM191AQ9H0A3 160 aa12.57□□□□□ -0.4
IGHV3-52-201ENST00000519770 DPH3P1Q9H4G8 78 aa12.57□□□□□ -0.4
IGHV3-52-201ENST00000519770 A0A0J9YWU9 116 aa12.56□□□□□ -0.4
IGHV3-52-201ENST00000519770 A0A1B0GXF2 115 aa12.56□□□□□ -0.4
IGHV3-52-201ENST00000519770 HLA-DQA1P01909 254 aa12.56□□□□□ -0.4
IGHV3-52-201ENST00000519770 FAM74A4Q5TZK3 123 aa12.56□□□□□ -0.4
IGHV3-52-201ENST00000519770 C14orf178Q8N769 122 aaPredicted RBP12.56□□□□□ -0.4
IGHV3-52-201ENST00000519770 TRAV4A0A0B4J268 109 aa12.55□□□□□ -0.4
IGHV3-52-201ENST00000519770 F5H697 171 aa12.55□□□□□ -0.4
IGHV3-52-201ENST00000519770 MGPP08493 103 aa12.55□□□□□ -0.4
IGHV3-52-201ENST00000519770 EVI2AP22794 236 aa12.55□□□□□ -0.4
IGHV3-52-201ENST00000519770 GNB1LQ9BYB4 327 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms