RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 NOP16Q9Y3C1 178 aaKnown RBP0.07□□□□□ -2.4
NEDD4-211ENST00000514893 ABCA12Q86UK0 2595 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 CCDC171Q6TFL3 1326 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 COL7A1Q02388 2944 aa0.07□□□□□ -2.4
NEDD4-211ENST00000514893 PTPRGP23470 1445 aa0.06□□□□□ -2.4
NEDD4-211ENST00000514893 MACF1Q9UPN3 7388 aaKnown RBP0.06□□□□□ -2.4
NEDD4-211ENST00000514893 PYYP10082 97 aa0.06□□□□□ -2.4
NEDD4-211ENST00000514893 S100A5P33763 92 aa0.06□□□□□ -2.4
NEDD4-211ENST00000514893 OR8B8Q15620 311 aa0.06□□□□□ -2.4
NEDD4-211ENST00000514893 Q5BKY6 102 aa0.06□□□□□ -2.4
NEDD4-211ENST00000514893 TMEM244Q5VVB8 128 aa0.06□□□□□ -2.4
NEDD4-211ENST00000514893 TOMM20LQ6UXN7 152 aa0.06□□□□□ -2.4
NEDD4-211ENST00000514893 SLC25A26Q70HW3 274 aa0.06□□□□□ -2.4
NEDD4-211ENST00000514893 DEFB132Q7Z7B7 95 aa0.06□□□□□ -2.4
NEDD4-211ENST00000514893 TCTE3Q8IZS6 198 aa0.06□□□□□ -2.4
NEDD4-211ENST00000514893 PPDPFLQ8WWR9 84 aa0.06□□□□□ -2.4
NEDD4-211ENST00000514893 UNC79Q9P2D8 2635 aa0.06□□□□□ -2.4
NEDD4-211ENST00000514893 TANC1Q9C0D5 1861 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 ESPL1Q14674 2120 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 ARHGAP31Q2M1Z3 1444 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 HELZP42694 1942 aaKnown RBP0.05□□□□□ -2.4
NEDD4-211ENST00000514893 TRAV12-2A0A075B6T6 113 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 GNG14A0A1W2PPG7 69 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 H0YJX3 145 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 M0R129 80 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 C4orf33Q8N1A6 199 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 DYNLRB2Q8TF09 96 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 IFI27L1Q96BM0 104 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 BPESC1Q9GZL8 116 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 CENPHQ9H3R5 247 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 HSPB11Q9Y547 144 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 UNC13BO14795 1591 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 LAMC3Q9Y6N6 1575 aa0.05□□□□□ -2.4
NEDD4-211ENST00000514893 HRNRQ86YZ3 2850 aaPredicted RBP0.04□□□□□ -2.4
NEDD4-211ENST00000514893 TRAV36DV7A0A075B6V5 113 aa0.04□□□□□ -2.4
NEDD4-211ENST00000514893 RBAKDNA6NC62 111 aa0.04□□□□□ -2.4
NEDD4-211ENST00000514893 J3QLW9 94 aa0.04□□□□□ -2.4
NEDD4-211ENST00000514893 APODP05090 189 aa0.04□□□□□ -2.4
NEDD4-211ENST00000514893 NMBP08949 121 aa0.04□□□□□ -2.4
NEDD4-211ENST00000514893 SLC25A6P12236 298 aa0.04□□□□□ -2.4
NEDD4-211ENST00000514893 ACYP2P14621 99 aa0.04□□□□□ -2.4
NEDD4-211ENST00000514893 ELOF1P60002 83 aaKnown RBP0.04□□□□□ -2.4
NEDD4-211ENST00000514893 RPL7L1Q6DKI1 246 aaKnown RBP0.04□□□□□ -2.4
NEDD4-211ENST00000514893 SMPXQ9UHP9 88 aa0.04□□□□□ -2.4
NEDD4-211ENST00000514893 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
NEDD4-211ENST00000514893 WDR97A6NE52 1622 aa0.04□□□□□ -2.4
NEDD4-211ENST00000514893 UBR5O95071 2799 aaPredicted RBP0.04□□□□□ -2.4
NEDD4-211ENST00000514893 SOGA1O94964 1423 aa0.04□□□□□ -2.4
NEDD4-211ENST00000514893 MAP2P11137 1827 aaKnown RBP0.03□□□□□ -2.4
NEDD4-211ENST00000514893 SYNJ1O43426 1573 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 CACNA1HO95180 2353 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 TRBV7-1A0A0A6YYK4 115 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 MCRIP1C9JLW8 97 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 DEGS1O15121 323 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 TNFSF15O95150 251 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 HLA-DRB4P13762 266 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 CCDC153Q494R4 210 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 FAM74A4Q5TZK3 123 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 SLC48A1Q6P1K1 146 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 TMEM91Q6ZNR0 172 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 CTAGE3PQ8IX95 158 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 C20orf197Q8N268 126 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 DDA1Q9BW61 102 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 HIGD1AQ9Y241 93 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 GINS2Q9Y248 185 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 HLA-DRB4X5D2U9 266 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 ABCA1O95477 2261 aa0.03□□□□□ -2.4
NEDD4-211ENST00000514893 OTOGQ6ZRI0 2925 aa0.03□□□□□ -2.41
NEDD4-211ENST00000514893 ERCC6Q03468 1493 aa0.03□□□□□ -2.41
NEDD4-211ENST00000514893 CASZ1Q86V15 1759 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 XIRP1Q702N8 1843 aaKnown RBP0.02□□□□□ -2.41
NEDD4-211ENST00000514893 KIF13AQ9H1H9 1805 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 A0A096LNT2 108 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 CFDP00746 253 aaPredicted RBP0.02□□□□□ -2.41
NEDD4-211ENST00000514893 GCHFRP30047 84 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 NPC2P61916 151 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 EMX2Q04743 252 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 ATP6V0E2Q8NHE4 81 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 SMIM11BQ8TCY0 68 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 MAGOHBQ96A72 148 aaKnown RBP0.02□□□□□ -2.41
NEDD4-211ENST00000514893 TMEM242Q9NWH2 141 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 LSM2Q9Y333 95 aaKnown RBP0.02□□□□□ -2.41
NEDD4-211ENST00000514893 DNAJC15Q9Y5T4 150 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 V9GYV3 84 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 FLNCQ14315 2725 aa0.02□□□□□ -2.41
NEDD4-211ENST00000514893 CDK13Q14004 1512 aaKnown RBP0.02□□□□□ -2.41
NEDD4-211ENST00000514893 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
NEDD4-211ENST00000514893 VIRMAQ69YN4 1812 aaKnown RBP0.01□□□□□ -2.41
NEDD4-211ENST00000514893 ANK2Q01484 3957 aa0.01□□□□□ -2.41
NEDD4-211ENST00000514893 GVQW2A0A096LPI5 108 aaPredicted RBP0.01□□□□□ -2.41
NEDD4-211ENST00000514893 TRAV12-3A0A0B4J271 114 aa0.01□□□□□ -2.41
NEDD4-211ENST00000514893 CXorf51AA0A1B0GTR3 108 aa0.01□□□□□ -2.41
NEDD4-211ENST00000514893 YPEL1O60688 119 aa0.01□□□□□ -2.41
NEDD4-211ENST00000514893 NCS1P62166 190 aa0.01□□□□□ -2.41
NEDD4-211ENST00000514893 SPCS2Q15005 226 aa0.01□□□□□ -2.41
NEDD4-211ENST00000514893 Q5XG85 94 aa0.01□□□□□ -2.41
NEDD4-211ENST00000514893 OR2T2Q6IF00 324 aa0.01□□□□□ -2.41
NEDD4-211ENST00000514893 COX7B2Q8TF08 81 aa0.01□□□□□ -2.41
NEDD4-211ENST00000514893 AIF1LQ9BQI0 150 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms