RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 SPXQ9BT56 116 aa12.19□□□□□ -0.46
SCAMP1-203ENST00000510030 GNB1LQ9BYB4 327 aa12.19□□□□□ -0.46
SCAMP1-203ENST00000510030 IGHV4-4A0A075B6R2 117 aa12.18□□□□□ -0.46
SCAMP1-203ENST00000510030 GIG44P09565 113 aaPredicted RBP12.18□□□□□ -0.46
SCAMP1-203ENST00000510030 TRGC1P0CF51 173 aa12.18□□□□□ -0.46
SCAMP1-203ENST00000510030 RBMY1A1P0DJD3 496 aaKnown RBP12.18□□□□□ -0.46
SCAMP1-203ENST00000510030 RBMY1CP0DJD4 496 aa12.18□□□□□ -0.46
SCAMP1-203ENST00000510030 RBMY1FQ15415 496 aaKnown RBP12.18□□□□□ -0.46
SCAMP1-203ENST00000510030 MRPL54Q6P161 138 aaKnown RBP12.18□□□□□ -0.46
SCAMP1-203ENST00000510030 C1orf158Q8N1D5 194 aa12.18□□□□□ -0.46
SCAMP1-203ENST00000510030 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.18□□□□□ -0.46
SCAMP1-203ENST00000510030 SCRT2Q9NQ03 307 aa12.18□□□□□ -0.46
SCAMP1-203ENST00000510030 IGHV3OR16-12A0A075B7B8 117 aa12.17□□□□□ -0.46
SCAMP1-203ENST00000510030 GNRH2O43555 120 aa12.17□□□□□ -0.46
SCAMP1-203ENST00000510030 HTN1P15515 57 aa12.17□□□□□ -0.46
SCAMP1-203ENST00000510030 RRN3P1Q2M238 152 aa12.17□□□□□ -0.46
SCAMP1-203ENST00000510030 Q6ZQT7 251 aa12.17□□□□□ -0.46
SCAMP1-203ENST00000510030 C9orf85Q96MD7 179 aa12.17□□□□□ -0.46
SCAMP1-203ENST00000510030 A0A1B0GXF2 115 aa12.16□□□□□ -0.46
SCAMP1-203ENST00000510030 SNURFLB1AK76 121 aa12.16□□□□□ -0.46
SCAMP1-203ENST00000510030 RNASE3P12724 160 aaKnown RBP12.16□□□□□ -0.46
SCAMP1-203ENST00000510030 RPS10P46783 165 aaKnown RBP12.16□□□□□ -0.46
SCAMP1-203ENST00000510030 TWIST1Q15672 202 aa12.16□□□□□ -0.46
SCAMP1-203ENST00000510030 PTH2Q96A98 100 aa12.16□□□□□ -0.46
SCAMP1-203ENST00000510030 RCHY1Q96PM5 261 aa12.16□□□□□ -0.46
SCAMP1-203ENST00000510030 TP53TG1Q9Y2A0 90 aa12.16□□□□□ -0.46
SCAMP1-203ENST00000510030 SPINK4O60575 86 aa12.15□□□□□ -0.46
SCAMP1-203ENST00000510030 NXPH4O95158 308 aa12.15□□□□□ -0.46
SCAMP1-203ENST00000510030 RAB4BP61018 213 aa12.15□□□□□ -0.46
SCAMP1-203ENST00000510030 ZNF575Q86XF7 245 aa12.15□□□□□ -0.46
SCAMP1-203ENST00000510030 AP1S3Q96PC3 154 aa12.15□□□□□ -0.46
SCAMP1-203ENST00000510030 NTF3P20783 257 aa12.14□□□□□ -0.47
SCAMP1-203ENST00000510030 CAMPP49913 170 aa12.14□□□□□ -0.47
SCAMP1-203ENST00000510030 GATD1Q8NB37 220 aa12.14□□□□□ -0.47
SCAMP1-203ENST00000510030 TIMM8BQ9Y5J9 83 aaPredicted RBP12.14□□□□□ -0.47
SCAMP1-203ENST00000510030 M0R2P5 195 aa12.13□□□□□ -0.47
SCAMP1-203ENST00000510030 FRMD6-AS1P0C7T7 363 aa12.13□□□□□ -0.47
SCAMP1-203ENST00000510030 OR10AG1Q8NH19 301 aa12.13□□□□□ -0.47
SCAMP1-203ENST00000510030 RNASE8Q8TDE3 154 aaKnown RBP12.13□□□□□ -0.47
SCAMP1-203ENST00000510030 TMEM191AQ9H0A3 160 aa12.13□□□□□ -0.47
SCAMP1-203ENST00000510030 MDFICQ9P1T7 246 aa12.13□□□□□ -0.47
SCAMP1-203ENST00000510030 TRAPPC1Q9Y5R8 145 aa12.13□□□□□ -0.47
SCAMP1-203ENST00000510030 NOTCH1P46531 2555 aa12.12□□□□□ -0.47
SCAMP1-203ENST00000510030 M0R381 172 aa12.12□□□□□ -0.47
SCAMP1-203ENST00000510030 SMIM17P0DL12 118 aa12.12□□□□□ -0.47
SCAMP1-203ENST00000510030 MIFP14174 115 aa12.12□□□□□ -0.47
SCAMP1-203ENST00000510030 DEFB135Q30KP9 77 aa12.12□□□□□ -0.47
SCAMP1-203ENST00000510030 LGALS9BQ3B8N2 356 aa12.12□□□□□ -0.47
SCAMP1-203ENST00000510030 C11orf72Q8NBR9 251 aa12.12□□□□□ -0.47
SCAMP1-203ENST00000510030 FRZBQ92765 325 aa12.12□□□□□ -0.47
SCAMP1-203ENST00000510030 RNF183Q96D59 192 aa12.12□□□□□ -0.47
SCAMP1-203ENST00000510030 C1orf196B1AJZ1 125 aa12.11□□□□□ -0.47
SCAMP1-203ENST00000510030 PRB2P02812 416 aaPredicted RBP12.11□□□□□ -0.47
SCAMP1-203ENST00000510030 DAZ2Q13117 558 aaKnown RBP12.11□□□□□ -0.47
SCAMP1-203ENST00000510030 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
SCAMP1-203ENST00000510030 TMEM136Q6ZRR5 245 aa12.11□□□□□ -0.47
SCAMP1-203ENST00000510030 A8MWV9 139 aa12.1□□□□□ -0.47
SCAMP1-203ENST00000510030 SPRY2O43597 315 aa12.1□□□□□ -0.47
SCAMP1-203ENST00000510030 GSN-AS1Q9NRJ2 163 aa12.1□□□□□ -0.47
SCAMP1-203ENST00000510030 TEX48A0A1B0GUV7 120 aa12.09□□□□□ -0.47
SCAMP1-203ENST00000510030 APCSP02743 223 aa12.09□□□□□ -0.47
SCAMP1-203ENST00000510030 RAB5BP61020 215 aa12.09□□□□□ -0.47
SCAMP1-203ENST00000510030 DMRTA1Q5VZB9 504 aa12.09□□□□□ -0.47
SCAMP1-203ENST00000510030 OR11H2Q8NH07 326 aa12.09□□□□□ -0.47
SCAMP1-203ENST00000510030 IL17DQ8TAD2 202 aa12.09□□□□□ -0.47
SCAMP1-203ENST00000510030 MRPL18Q9H0U6 180 aaKnown RBP12.09□□□□□ -0.47
SCAMP1-203ENST00000510030 DPH3P1Q9H4G8 78 aa12.09□□□□□ -0.47
SCAMP1-203ENST00000510030 CIDEAO60543 219 aa12.08□□□□□ -0.48
SCAMP1-203ENST00000510030 PPBPP02775 128 aa12.08□□□□□ -0.48
SCAMP1-203ENST00000510030 RASL10AQ92737 203 aa12.08□□□□□ -0.48
SCAMP1-203ENST00000510030 MUC21A0A0G2JKD1 596 aa12.07□□□□□ -0.48
SCAMP1-203ENST00000510030 MUC21A0A140T8X8 626 aa12.07□□□□□ -0.48
SCAMP1-203ENST00000510030 RHODO00212 210 aa12.07□□□□□ -0.48
SCAMP1-203ENST00000510030 FABP9Q0Z7S8 132 aa12.07□□□□□ -0.48
SCAMP1-203ENST00000510030 FAM104BQ5XKR9 115 aa12.07□□□□□ -0.48
SCAMP1-203ENST00000510030 OVOL2Q9BRP0 275 aa12.07□□□□□ -0.48
SCAMP1-203ENST00000510030 X6R8D5 127 aa12.07□□□□□ -0.48
SCAMP1-203ENST00000510030 LYRM9A8MSI8 78 aa12.06□□□□□ -0.48
SCAMP1-203ENST00000510030 K7EIL1 84 aa12.06□□□□□ -0.48
SCAMP1-203ENST00000510030 TRGC2P03986 189 aa12.06□□□□□ -0.48
SCAMP1-203ENST00000510030 AZU1P20160 251 aa12.06□□□□□ -0.48
SCAMP1-203ENST00000510030 SSTP61278 116 aa12.06□□□□□ -0.48
SCAMP1-203ENST00000510030 SPATA25Q9BR10 227 aa12.06□□□□□ -0.48
SCAMP1-203ENST00000510030 PPP1R17O96001 155 aa12.05□□□□□ -0.48
SCAMP1-203ENST00000510030 DEFB121Q5J5C9 76 aa12.05□□□□□ -0.48
SCAMP1-203ENST00000510030 MRAP2Q96G30 205 aa12.05□□□□□ -0.48
SCAMP1-203ENST00000510030 MSRB1Q9NZV6 116 aa12.05□□□□□ -0.48
SCAMP1-203ENST00000510030 LAMTOR2Q9Y2Q5 125 aa12.05□□□□□ -0.48
SCAMP1-203ENST00000510030 EVI2AP22794 236 aa12.04□□□□□ -0.48
SCAMP1-203ENST00000510030 TRGV1A0A0A0MS02 117 aa12.03□□□□□ -0.48
SCAMP1-203ENST00000510030 H7C1H1 209 aa12.03□□□□□ -0.48
SCAMP1-203ENST00000510030 SLAQ13239 276 aa12.03□□□□□ -0.48
SCAMP1-203ENST00000510030 ZFP2Q6ZN57 461 aa12.03□□□□□ -0.48
SCAMP1-203ENST00000510030 ORMDL3Q8N138 153 aa12.03□□□□□ -0.48
SCAMP1-203ENST00000510030 NOP10Q9NPE3 64 aaKnown RBP12.03□□□□□ -0.48
SCAMP1-203ENST00000510030 MUC4Q99102 2169 aa12.02□□□□□ -0.48
SCAMP1-203ENST00000510030 DNAH3Q8TD57 4116 aa12.02□□□□□ -0.49
SCAMP1-203ENST00000510030 PLAC8L1A1L4L8 177 aa12.02□□□□□ -0.49
SCAMP1-203ENST00000510030 AMN1Q8IY45 258 aa12.02□□□□□ -0.49
SCAMP1-203ENST00000510030 C14orf178Q8N769 122 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms