RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 DEFB131BA0A096LNP1 70 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 SDHAF1A6NFY7 115 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 NEGR1Q7Z3B1 354 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 FAM167A-AS1Q96KT0 104 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 C1orf43Q9BWL3 253 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 SHANK1Q9Y566 2161 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 C6orf226Q5I0X4 101 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 MORN5Q5VZ52 161 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 FAM104BQ5XKR9 115 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 ERASQ7Z444 233 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 TMEM170AQ8WVE7 144 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 PRRC2AP48634 2157 aaKnown RBP3.86□□□□□ -1.79
PHF3-210ENST00000509876 TRBV6-1A0A0K0K1D8 114 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 IGHV4-30-4P0DP06 118 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 C15orf53Q8NAA6 179 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 PMCHL2Q9BQD1 86 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 NUPR2A6NF83 97 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 C5orf52A6NGY3 159 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 DPM2O94777 84 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 PRB2P02812 416 aaPredicted RBP3.86□□□□□ -1.79
PHF3-210ENST00000509876 DNLZQ5SXM8 178 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 NIT1Q86X76 327 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 PRO0255Q9UI72 69 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 IGLV1-51P01701 117 aa3.86□□□□□ -1.79
PHF3-210ENST00000509876 SMKR1H3BMG3 65 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 COX6CP09669 75 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 Q8N8P6 123 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 HIST1H4GQ99525 98 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 U3KQK5 164 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 PIEZO2Q9H5I5 2752 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 NAV2Q8IVL1 2488 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 A6NDN8 102 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 FAM222AQ5U5X8 452 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 Q6ZQT7 251 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 Q6ZWC4 215 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 C20orf78Q9BR46 151 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 Q9HAA7 133 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 SMIM27A0A1W2PRY6 76 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 TTC32Q5I0X7 151 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 IGHV4-28A0A0C4DH34 117 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 LINC00158P58513 81 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 C10orf126Q8N4M7 172 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 DEFB104AQ8WTQ1 72 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 ZNF503Q96F45 646 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 PLEKHB2Q96CS7 222 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 C11orf1Q9H5F2 150 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 TP53TG1Q9Y2A0 90 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 ANKRD11Q6UB99 2663 aaPredicted RBP3.85□□□□□ -1.79
PHF3-210ENST00000509876 IGHV3-30P01768 117 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 IGHV3-33P01772 117 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 IGKCP01834 107 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 IGHV3-30-3P0DP02 117 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 IGHV3-30-5P0DP03 117 aa3.85□□□□□ -1.79
PHF3-210ENST00000509876 CEP295Q9C0D2 2601 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 PTPN13Q12923 2485 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 TRAV26-2A0A0B4J265 109 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 FSHBP01225 129 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 VAMP3Q15836 100 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 SPATA45Q537H7 98 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 LURAP1LQ8IV03 231 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 UBE2WQ96B02 151 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 SPTBN4Q9H254 2564 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 TRBV24-1A0A075B6N3 115 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 GHRHP01286 108 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 LGALS9BQ3B8N2 356 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 IFI27L1Q96BM0 104 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 C20orf173Q96LM9 149 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.84□□□□□ -1.79
PHF3-210ENST00000509876 CXCL1P09341 107 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 FRMD6-AS1P0C7T7 363 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 MRPL51Q4U2R6 128 aaKnown RBP3.84□□□□□ -1.79
PHF3-210ENST00000509876 PET117Q6UWS5 81 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 V9GYV3 84 aa3.84□□□□□ -1.79
PHF3-210ENST00000509876 DEFB1P60022 68 aa3.84□□□□□ -1.8
PHF3-210ENST00000509876 CEP350Q5VT06 3117 aa3.84□□□□□ -1.8
PHF3-210ENST00000509876 ATRXP46100 2492 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 PLNP26678 52 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 C14orf177Q52M58 125 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 SUMO4Q6EEV6 95 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 SERF1AO75920 110 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 Q0VG73 95 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 ZFAND6Q6FIF0 208 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 COL27A1Q8IZC6 1860 aaPredicted RBP3.83□□□□□ -1.8
PHF3-210ENST00000509876 ZNF462Q96JM2 2506 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 TRBV7-3A0A075B6L6 115 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 TRAV26-1A0A087WT03 109 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 SLC25A20O43772 301 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 ZNF124Q15973 351 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 S100A7L2Q5SY68 101 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 SPATA3Q8NHX4 192 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 CITED1Q99966 193 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 KLF12Q9Y4X4 402 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 TLN1Q9Y490 2541 aaKnown RBP3.83□□□□□ -1.8
PHF3-210ENST00000509876 A0A0J9YWU9 116 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 K7EMI3 77 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 P0DMU3 169 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 FAM231AP0DMU4 169 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 FAM231CP0DMU5 169 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 SLC25A34Q6PIV7 304 aa3.83□□□□□ -1.8
PHF3-210ENST00000509876 FAM19A2Q8N3H0 131 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms