RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SMIM27A0A1W2PRY6 76 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 HIGD1CA8MV81 97 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 OR5AL1P0C617 328 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 CTRLP40313 264 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 DAZ2Q13117 558 aaKnown RBP10.14□□□□□ -0.79
RNF4-208ENST00000507247 LYZL1Q6UWQ5 148 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 OR10AG1Q8NH19 301 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 SPXQ9BT56 116 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 TPPP3Q9BW30 176 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 CTDSP1Q9GZU7 261 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 GFRA4Q9GZZ7 299 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 CELA1Q9UNI1 258 aa10.14□□□□□ -0.79
RNF4-208ENST00000507247 A0A1W2PPQ1 181 aa10.13□□□□□ -0.79
RNF4-208ENST00000507247 FAM231BA6NCW3 169 aa10.13□□□□□ -0.79
RNF4-208ENST00000507247 SPINK4O60575 86 aa10.13□□□□□ -0.79
RNF4-208ENST00000507247 FOXA3P55318 350 aaPredicted RBP10.13□□□□□ -0.79
RNF4-208ENST00000507247 FAM222AQ5U5X8 452 aa10.13□□□□□ -0.79
RNF4-208ENST00000507247 PGLYRP4Q96LB8 373 aa10.13□□□□□ -0.79
RNF4-208ENST00000507247 MRPL16Q9NX20 251 aaKnown RBP10.13□□□□□ -0.79
RNF4-208ENST00000507247 NACAE9PAV3 2078 aa10.12□□□□□ -0.79
RNF4-208ENST00000507247 M0R2P5 195 aa10.12□□□□□ -0.79
RNF4-208ENST00000507247 FAM3BP58499 235 aaPredicted RBP10.12□□□□□ -0.79
RNF4-208ENST00000507247 Q6ZTI0 123 aa10.12□□□□□ -0.79
RNF4-208ENST00000507247 NUP35Q8NFH5 326 aa10.12□□□□□ -0.79
RNF4-208ENST00000507247 DKK2Q9UBU2 259 aa10.12□□□□□ -0.79
RNF4-208ENST00000507247 PHLDA3Q9Y5J5 127 aa10.12□□□□□ -0.79
RNF4-208ENST00000507247 HUWE1Q7Z6Z7 4374 aaKnown RBP10.12□□□□□ -0.79
RNF4-208ENST00000507247 NBEAL2Q6ZNJ1 2754 aa10.11□□□□□ -0.79
RNF4-208ENST00000507247 DNAH9Q9NYC9 4486 aa10.11□□□□□ -0.79
RNF4-208ENST00000507247 TRGV1A0A0A0MS02 117 aa10.11□□□□□ -0.79
RNF4-208ENST00000507247 NXPH4O95158 308 aa10.11□□□□□ -0.79
RNF4-208ENST00000507247 SSTP61278 116 aa10.11□□□□□ -0.79
RNF4-208ENST00000507247 DMRTA1Q5VZB9 504 aa10.11□□□□□ -0.79
RNF4-208ENST00000507247 LINC00612Q8N6U2 182 aa10.11□□□□□ -0.79
RNF4-208ENST00000507247 TMEM242Q9NWH2 141 aa10.11□□□□□ -0.79
RNF4-208ENST00000507247 NAT8BQ9UHF3 227 aa10.11□□□□□ -0.79
RNF4-208ENST00000507247 TENM3Q9P273 2699 aa10.11□□□□□ -0.79
RNF4-208ENST00000507247 LYRM9A8MSI8 78 aa10.1□□□□□ -0.79
RNF4-208ENST00000507247 F2Z2F3 143 aa10.1□□□□□ -0.79
RNF4-208ENST00000507247 M0R381 172 aa10.1□□□□□ -0.79
RNF4-208ENST00000507247 S100A1P23297 94 aa10.1□□□□□ -0.79
RNF4-208ENST00000507247 LGALS9BQ3B8N2 356 aa10.1□□□□□ -0.79
RNF4-208ENST00000507247 ZFP82Q8N141 532 aa10.1□□□□□ -0.79
RNF4-208ENST00000507247 RASL10AQ92737 203 aa10.1□□□□□ -0.79
RNF4-208ENST00000507247 PTH2Q96A98 100 aa10.1□□□□□ -0.79
RNF4-208ENST00000507247 CNFNQ9BYD5 112 aa10.1□□□□□ -0.79
RNF4-208ENST00000507247 MSRB1Q9NZV6 116 aa10.1□□□□□ -0.79
RNF4-208ENST00000507247 U3KQK5 164 aa10.1□□□□□ -0.79
RNF4-208ENST00000507247 IGHV4-4A0A075B6R2 117 aa10.09□□□□□ -0.79
RNF4-208ENST00000507247 GAGE12BA1L429 117 aa10.09□□□□□ -0.79
RNF4-208ENST00000507247 GAGE7O76087 117 aa10.09□□□□□ -0.79
RNF4-208ENST00000507247 GAGE12FP0CL80 117 aa10.09□□□□□ -0.79
RNF4-208ENST00000507247 GAGE12GP0CL81 117 aa10.09□□□□□ -0.79
RNF4-208ENST00000507247 GAGE12IP0CL82 117 aa10.09□□□□□ -0.79
RNF4-208ENST00000507247 SPART-AS1P0CW21 52 aa10.09□□□□□ -0.79
RNF4-208ENST00000507247 ZNF876PQ49A33 203 aa10.09□□□□□ -0.79
RNF4-208ENST00000507247 SPANXN1Q5VSR9 72 aa10.09□□□□□ -0.79
RNF4-208ENST00000507247 IMMP2LQ96T52 175 aa10.09□□□□□ -0.79
RNF4-208ENST00000507247 JPT2Q9H910 190 aa10.09□□□□□ -0.79
RNF4-208ENST00000507247 URGCP-MRPS24S4R325 110 aa10.09□□□□□ -0.79
RNF4-208ENST00000507247 DEFB130BP0DP73 79 aa10.08□□□□□ -0.8
RNF4-208ENST00000507247 DEFB130AP0DP74 79 aa10.08□□□□□ -0.8
RNF4-208ENST00000507247 NTF3P20783 257 aa10.08□□□□□ -0.8
RNF4-208ENST00000507247 CACNG7P62955 275 aa10.08□□□□□ -0.8
RNF4-208ENST00000507247 WDR73Q6P4I2 378 aa10.08□□□□□ -0.8
RNF4-208ENST00000507247 SYT8Q8NBV8 401 aa10.08□□□□□ -0.8
RNF4-208ENST00000507247 A0A1B0GUT8 65 aa10.07□□□□□ -0.8
RNF4-208ENST00000507247 CXorf65A6NEN9 183 aa10.07□□□□□ -0.8
RNF4-208ENST00000507247 SCO1O75880 301 aa10.07□□□□□ -0.8
RNF4-208ENST00000507247 MRPL54Q6P161 138 aaKnown RBP10.07□□□□□ -0.8
RNF4-208ENST00000507247 CBLN2Q8IUK8 224 aa10.07□□□□□ -0.8
RNF4-208ENST00000507247 POM121L12Q8N7R1 296 aa10.07□□□□□ -0.8
RNF4-208ENST00000507247 EDA2RQ9HAV5 297 aa10.07□□□□□ -0.8
RNF4-208ENST00000507247 TEX48A0A1B0GUV7 120 aa10.06□□□□□ -0.8
RNF4-208ENST00000507247 DAD1P61803 113 aa10.06□□□□□ -0.8
RNF4-208ENST00000507247 TWIST1Q15672 202 aa10.06□□□□□ -0.8
RNF4-208ENST00000507247 C12orf74Q32Q52 190 aa10.06□□□□□ -0.8
RNF4-208ENST00000507247 PIK3CD-AS1Q5SR53 167 aa10.06□□□□□ -0.8
RNF4-208ENST00000507247 TMEM88Q6PEY1 159 aa10.06□□□□□ -0.8
RNF4-208ENST00000507247 KCNIP4Q6PIL6 250 aa10.06□□□□□ -0.8
RNF4-208ENST00000507247 BORCS7Q96B45 105 aa10.06□□□□□ -0.8
RNF4-208ENST00000507247 SAMD10Q9BYL1 202 aa10.06□□□□□ -0.8
RNF4-208ENST00000507247 TRGV2A0A075B6R0 118 aa10.05□□□□□ -0.8
RNF4-208ENST00000507247 A0A1B0GXF2 115 aa10.05□□□□□ -0.8
RNF4-208ENST00000507247 RS1O15537 224 aa10.05□□□□□ -0.8
RNF4-208ENST00000507247 S100PP25815 95 aa10.05□□□□□ -0.8
RNF4-208ENST00000507247 NANOS2P60321 138 aaKnown RBP10.05□□□□□ -0.8
RNF4-208ENST00000507247 RIGQ13278 110 aa10.05□□□□□ -0.8
RNF4-208ENST00000507247 CFAP126Q5VTH2 177 aa10.05□□□□□ -0.8
RNF4-208ENST00000507247 C11orf45Q8TAV5 145 aa10.05□□□□□ -0.8
RNF4-208ENST00000507247 BTF3L4Q96K17 158 aa10.05□□□□□ -0.8
RNF4-208ENST00000507247 C18orf15Q96N68 181 aa10.05□□□□□ -0.8
RNF4-208ENST00000507247 NDUFAF3Q9BU61 184 aa10.05□□□□□ -0.8
RNF4-208ENST00000507247 TRAV9-1A0A075B6T8 112 aa10.04□□□□□ -0.8
RNF4-208ENST00000507247 TRAV4A0A0B4J268 109 aa10.04□□□□□ -0.8
RNF4-208ENST00000507247 IGHV3-53P01767 116 aa10.04□□□□□ -0.8
RNF4-208ENST00000507247 ELOBQ15370 118 aa10.04□□□□□ -0.8
RNF4-208ENST00000507247 ZNF479Q96JC4 524 aa10.04□□□□□ -0.8
RNF4-208ENST00000507247 YPEL4Q96NS1 127 aa10.04□□□□□ -0.8
RNF4-208ENST00000507247 SMCO4Q9NRQ5 59 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms