RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 A0A096LNT2 108 aa0.09□□□□□ -2.4
RBM39-242ENST00000498280 TRBV10-1A0A0K0K1A3 114 aa0.09□□□□□ -2.4
RBM39-242ENST00000498280 PNMA8CA0A1B0GUJ8 204 aa0.09□□□□□ -2.4
RBM39-242ENST00000498280 H0YJX3 145 aa0.09□□□□□ -2.4
RBM39-242ENST00000498280 DPM2O94777 84 aa0.09□□□□□ -2.4
RBM39-242ENST00000498280 MPC1LP0DKB6 136 aa0.09□□□□□ -2.4
RBM39-242ENST00000498280 HIST1H1BP16401 226 aaKnown RBP0.09□□□□□ -2.4
RBM39-242ENST00000498280 OR8B8Q15620 311 aa0.09□□□□□ -2.4
RBM39-242ENST00000498280 TMEM244Q5VVB8 128 aa0.09□□□□□ -2.4
RBM39-242ENST00000498280 CALML5Q9NZT1 146 aa0.09□□□□□ -2.4
RBM39-242ENST00000498280 GINS2Q9Y248 185 aa0.09□□□□□ -2.4
RBM39-242ENST00000498280 DLEC1Q9Y238 1755 aa0.09□□□□□ -2.4
RBM39-242ENST00000498280 XIRP1Q702N8 1843 aaKnown RBP0.08□□□□□ -2.4
RBM39-242ENST00000498280 KDM5CP41229 1560 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 BLMP54132 1417 aaPredicted RBP0.08□□□□□ -2.4
RBM39-242ENST00000498280 TRAV36DV7A0A075B6V5 113 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 A0A1B0GW64 132 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 GNG14A0A1W2PPG7 69 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 NBEAP1P0C6P0 100 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 PLGLB1Q02325 96 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 TMEM91Q6ZNR0 172 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 SLC35B3Q9H1N7 401 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 BANF2Q9H503 90 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 MRPL40Q9NQ50 206 aaKnown RBP0.08□□□□□ -2.4
RBM39-242ENST00000498280 HSPB11Q9Y547 144 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 DNAJC15Q9Y5T4 150 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 ESPL1Q14674 2120 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 FLNAP21333 2647 aaKnown RBP0.08□□□□□ -2.4
RBM39-242ENST00000498280 ZFYVE26Q68DK2 2539 aa0.08□□□□□ -2.4
RBM39-242ENST00000498280 HIVEP1P15822 2718 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 SETD2Q9BYW2 2564 aaPredicted RBP0.07□□□□□ -2.4
RBM39-242ENST00000498280 HELZP42694 1942 aaKnown RBP0.07□□□□□ -2.4
RBM39-242ENST00000498280 CXorf51AA0A1B0GTR3 108 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 C9JAW5 83 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 DEGS1O15121 323 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 TNFSF15O95150 251 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 OR2H2O95918 312 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 CMPK1P30085 196 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 AKR1D1P51857 326 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 SLC25A26Q70HW3 274 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 PROK2Q9HC23 129 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 HIGD1AQ9Y241 93 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 MAP2P11137 1827 aaKnown RBP0.07□□□□□ -2.4
RBM39-242ENST00000498280 ABCA12Q86UK0 2595 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 TENM4Q6N022 2769 aa0.07□□□□□ -2.4
RBM39-242ENST00000498280 SETXQ7Z333 2677 aaKnown RBP0.07□□□□□ -2.4
RBM39-242ENST00000498280 FASNP49327 2511 aaKnown RBP0.07□□□□□ -2.4
RBM39-242ENST00000498280 TPRP12270 2363 aaKnown RBP0.06□□□□□ -2.4
RBM39-242ENST00000498280 TANC1Q9C0D5 1861 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 TEX49A0A1B0GTD5 131 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 A0A1B0GX51 115 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 PYYP10082 97 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 HLA-DRB4P13762 266 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 B2MP61769 119 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 VMO1Q7Z5L0 202 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 TCTE3Q8IZS6 198 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 PPDPFLQ8WWR9 84 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 TMEM141Q96I45 108 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 DSCR8Q96T75 97 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 TAS2R8Q9NYW2 309 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 HLA-DRB4X5D2U9 266 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 CACNA1HO95180 2353 aa0.06□□□□□ -2.4
RBM39-242ENST00000498280 KDM6BO15054 1643 aa0.05□□□□□ -2.4
RBM39-242ENST00000498280 BPTFQ12830 3046 aa0.05□□□□□ -2.4
RBM39-242ENST00000498280 ABCA1O95477 2261 aa0.05□□□□□ -2.4
RBM39-242ENST00000498280 SMIM24O75264 130 aa0.05□□□□□ -2.4
RBM39-242ENST00000498280 APOC1P02654 83 aa0.05□□□□□ -2.4
RBM39-242ENST00000498280 SCTP09683 121 aa0.05□□□□□ -2.4
RBM39-242ENST00000498280 ELOF1P60002 83 aaKnown RBP0.05□□□□□ -2.4
RBM39-242ENST00000498280 TAC4Q86UU9 113 aa0.05□□□□□ -2.4
RBM39-242ENST00000498280 SNX29P2Q8IUI4 249 aa0.05□□□□□ -2.4
RBM39-242ENST00000498280 BIRC6Q9NR09 4857 aa0.05□□□□□ -2.4
RBM39-242ENST00000498280 POLQO75417 2590 aa0.05□□□□□ -2.4
RBM39-242ENST00000498280 HECTD1Q9ULT8 2610 aa0.05□□□□□ -2.4
RBM39-242ENST00000498280 PDZD2O15018 2839 aa0.05□□□□□ -2.4
RBM39-242ENST00000498280 IGSF10Q6WRI0 2623 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 ARAP1Q96P48 1450 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 CASZ1Q86V15 1759 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 DOPEY1Q5JWR5 2465 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 RIF1Q5UIP0 2472 aaKnown RBP0.04□□□□□ -2.4
RBM39-242ENST00000498280 PLXNA2O75051 1894 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 ZNF670-ZNF695F2Z2N8 137 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 SLC25A6P12236 298 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 EMX2Q04743 252 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 CLLU1Q5K131 121 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 DYNLRB2Q8TF09 96 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 COA4Q9NYJ1 87 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 BET1LQ9NYM9 111 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 NOP16Q9Y3C1 178 aaKnown RBP0.04□□□□□ -2.4
RBM39-242ENST00000498280 CHD8Q9HCK8 2581 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 CCDC171Q6TFL3 1326 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 PTPRZ1P23471 2315 aaPredicted RBP0.04□□□□□ -2.4
RBM39-242ENST00000498280 ACANP16112 2415 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 EP300Q09472 2414 aaPredicted RBP0.04□□□□□ -2.4
RBM39-242ENST00000498280 ACACBO00763 2458 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 IGF2RP11717 2491 aa0.04□□□□□ -2.4
RBM39-242ENST00000498280 SPAG17Q6Q759 2223 aa0.03□□□□□ -2.4
RBM39-242ENST00000498280 COL12A1Q99715 3063 aa0.03□□□□□ -2.4
RBM39-242ENST00000498280 HERC2O95714 4834 aa0.03□□□□□ -2.4
RBM39-242ENST00000498280 TRAV12-2A0A075B6T6 113 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms