RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ATP6V1FQ16864 119 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 BSXQ3C1V8 233 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 OR10J3Q5JRS4 329 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 LCE4AQ5TA78 99 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 OR2AE1Q8NHA4 323 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 LINC01600Q96MT4 127 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 GAFA1Q96PS6 74 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 KRTAP1-5Q9BYS1 174 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 RBFOX1Q9NWB1 397 aaKnown RBP0.98□□□□□ -2.25
XRN1-214ENST00000498077 RNF11Q9Y3C5 154 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 LINC00588Q9Y4M8 146 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 ARID2Q68CP9 1835 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 IGHV3OR16-13A0A075B7E8 117 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 A0A0G2JQZ4 141 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 A0A1W2PPV9 198 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 HLA-AP01891 365 aaKnown RBP0.98□□□□□ -2.25
XRN1-214ENST00000498077 HIST1H1BP16401 226 aaKnown RBP0.98□□□□□ -2.25
XRN1-214ENST00000498077 CDKN1AP38936 164 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 SSX1Q16384 188 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 C1QTNF12Q5T7M4 302 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 NFE4Q86UQ8 179 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 FAM210BQ96KR6 192 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 AMELYQ99218 206 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 B9D2Q9BPU9 175 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 RNF126Q9BV68 326 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 FNDC4Q9H6D8 234 aaPredicted RBP0.98□□□□□ -2.25
XRN1-214ENST00000498077 SMCO4Q9NRQ5 59 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 GSKIPQ9P0R6 139 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 ZNRD1Q9P1U0 126 aa0.98□□□□□ -2.25
XRN1-214ENST00000498077 A0A1W2PR77 199 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 TMEM189A5PLL7 270 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 LYRM9A8MSI8 78 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 C9JVG2 144 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 OR7C2O60412 319 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 LIFP15018 202 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 UBE2D1P51668 147 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 FOXA1P55317 472 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 LINC00205P59089 165 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 PTENP60484 403 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 UBE2IP63279 158 aaKnown RBP0.97□□□□□ -2.25
XRN1-214ENST00000498077 PMS2P3Q13401 168 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 SPHARQ15513 63 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 PMCHL1Q16048 86 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 SP6Q3SY56 376 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 C1orf195Q5TG92 126 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 CCDC32Q9BV29 185 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 IMP3Q9NV31 184 aaKnown RBP0.97□□□□□ -2.25
XRN1-214ENST00000498077 MYH15Q9Y2K3 1946 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 PLIN4Q96Q06 1357 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 FRYLO94915 3013 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 TRBV7-1A0A0A6YYK4 115 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 NMBP08949 121 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 LINC00271P0C7V0 271 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 IGHV3-30-3P0DP02 117 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 SSBP1Q04837 148 aaKnown RBP0.97□□□□□ -2.25
XRN1-214ENST00000498077 FAM78BQ5VT40 261 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 Q6AWC8 147 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 LINC00322Q6ZN03 302 aaPredicted RBP0.97□□□□□ -2.25
XRN1-214ENST00000498077 DEFB106AQ8N104 65 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 SUMF2Q8NBJ7 301 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 OR5D13Q8NGL4 314 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 TMEM80Q96HE8 168 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 ARMC7Q9H6L4 198 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 MED20Q9H944 212 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 XAGE1AQ9HD64 81 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 FGF20Q9NP95 211 aaPredicted RBP0.97□□□□□ -2.25
XRN1-214ENST00000498077 LHFPL6Q9Y693 200 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 TRIP12Q14669 1992 aaPredicted RBP0.97□□□□□ -2.25
XRN1-214ENST00000498077 MTCL1Q9Y4B5 1905 aaKnown RBP0.97□□□□□ -2.25
XRN1-214ENST00000498077 KTN1Q86UP2 1357 aaKnown RBP0.97□□□□□ -2.25
XRN1-214ENST00000498077 TRAV13-1A0A0B4J241 112 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 SPTY2D1-AS1A0A0U1RR47 76 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 SOX14O95416 240 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 IGHV4-39P01824 125 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 MP68P56378 58 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 PSG9Q00887 426 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 ZNF791Q3KP31 576 aaPredicted RBP0.97□□□□□ -2.25
XRN1-214ENST00000498077 TOMM20LQ6UXN7 152 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 Q6ZPA2 131 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 WFDC10BQ8IUB3 73 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 LINC00612Q8N6U2 182 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 TSLPQ969D9 159 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 VSTM2LQ96N03 204 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 PRELID3AQ96N28 172 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 C2orf88Q9BSF0 95 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 MAF1Q9H063 256 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 C11orf1Q9H5F2 150 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 PLEKHJ1Q9NW61 149 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 SPCS1Q9Y6A9 102 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 IGHV1-58A0A0C4DH39 117 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 FABP5P3A8MUU1 101 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 PSPHP1O15172 72 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 SCGB1D1O95968 90 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 CD79AP11912 226 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 SAA4P35542 130 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 FAM162BQ5T6X4 162 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 HECTD4Q9Y4D8 3996 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 AHNAKQ09666 5890 aaKnown RBP0.97□□□□□ -2.25
XRN1-214ENST00000498077 M0QZQ0 153 aa0.97□□□□□ -2.25
XRN1-214ENST00000498077 KMT2DO14686 5537 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms