RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 HIGD1CA8MV81 97 aa13.11□□□□□ -0.31
RGP1-202ENST00000496906 SNURFLB1AK76 121 aa13.11□□□□□ -0.31
RGP1-202ENST00000496906 OR5AL1P0C617 328 aa13.11□□□□□ -0.31
RGP1-202ENST00000496906 TIMM8BQ9Y5J9 83 aaPredicted RBP13.11□□□□□ -0.31
RGP1-202ENST00000496906 DEFB4AO15263 64 aa13.1□□□□□ -0.31
RGP1-202ENST00000496906 EMP1P54849 157 aa13.1□□□□□ -0.31
RGP1-202ENST00000496906 TPPP3Q9BW30 176 aa13.1□□□□□ -0.31
RGP1-202ENST00000496906 NHLRC4P0CG21 123 aaPredicted RBP13.09□□□□□ -0.31
RGP1-202ENST00000496906 CTRLP40313 264 aa13.09□□□□□ -0.31
RGP1-202ENST00000496906 DAZ2Q13117 558 aaKnown RBP13.09□□□□□ -0.31
RGP1-202ENST00000496906 SPXQ9BT56 116 aa13.09□□□□□ -0.31
RGP1-202ENST00000496906 C11orf68Q9H3H3 251 aaKnown RBP13.09□□□□□ -0.31
RGP1-202ENST00000496906 NOP10Q9NPE3 64 aaKnown RBP13.09□□□□□ -0.31
RGP1-202ENST00000496906 NAT8BQ9UHF3 227 aa13.09□□□□□ -0.31
RGP1-202ENST00000496906 F2Z2F3 143 aa13.08□□□□□ -0.32
RGP1-202ENST00000496906 LYZL1Q6UWQ5 148 aa13.08□□□□□ -0.32
RGP1-202ENST00000496906 NUP35Q8NFH5 326 aa13.08□□□□□ -0.32
RGP1-202ENST00000496906 OR10AG1Q8NH19 301 aa13.08□□□□□ -0.32
RGP1-202ENST00000496906 PGLYRP4Q96LB8 373 aa13.08□□□□□ -0.32
RGP1-202ENST00000496906 IMMP2LQ96T52 175 aa13.08□□□□□ -0.32
RGP1-202ENST00000496906 PHLDA3Q9Y5J5 127 aa13.08□□□□□ -0.32
RGP1-202ENST00000496906 CNFNQ9BYD5 112 aa13.07□□□□□ -0.32
RGP1-202ENST00000496906 MUC21A0A0G2JKD1 596 aa13.07□□□□□ -0.32
RGP1-202ENST00000496906 MUC21A0A140T8X8 626 aa13.07□□□□□ -0.32
RGP1-202ENST00000496906 M0R2P5 195 aa13.07□□□□□ -0.32
RGP1-202ENST00000496906 SPINK4O60575 86 aa13.07□□□□□ -0.32
RGP1-202ENST00000496906 FAM3BP58499 235 aaPredicted RBP13.06□□□□□ -0.32
RGP1-202ENST00000496906 PTH2Q96A98 100 aa13.06□□□□□ -0.32
RGP1-202ENST00000496906 MUC4Q99102 2169 aa13.05□□□□□ -0.32
RGP1-202ENST00000496906 A0A0J9YWU9 116 aa13.05□□□□□ -0.32
RGP1-202ENST00000496906 NXPH4O95158 308 aa13.05□□□□□ -0.32
RGP1-202ENST00000496906 FAM222AQ5U5X8 452 aa13.05□□□□□ -0.32
RGP1-202ENST00000496906 DMRTA1Q5VZB9 504 aa13.05□□□□□ -0.32
RGP1-202ENST00000496906 ZFP82Q8N141 532 aa13.05□□□□□ -0.32
RGP1-202ENST00000496906 MRPL16Q9NX20 251 aaKnown RBP13.05□□□□□ -0.32
RGP1-202ENST00000496906 DKK2Q9UBU2 259 aa13.05□□□□□ -0.32
RGP1-202ENST00000496906 TRGV1A0A0A0MS02 117 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 CXorf65A6NEN9 183 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 LYRM9A8MSI8 78 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 M0R381 172 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 CACNG7P62955 275 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 LGALS9BQ3B8N2 356 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 ZNF876PQ49A33 203 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 SPANXN1Q5VSR9 72 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 WDR73Q6P4I2 378 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 KCNIP4Q6PIL6 250 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 Q6ZTI0 123 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 RASL10AQ92737 203 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 CELA1Q9UNI1 258 aa13.04□□□□□ -0.32
RGP1-202ENST00000496906 IGHV4-4A0A075B6R2 117 aa13.03□□□□□ -0.32
RGP1-202ENST00000496906 SSTP61278 116 aa13.03□□□□□ -0.32
RGP1-202ENST00000496906 LINC00612Q8N6U2 182 aa13.03□□□□□ -0.32
RGP1-202ENST00000496906 SYT8Q8NBV8 401 aa13.03□□□□□ -0.32
RGP1-202ENST00000496906 URGCP-MRPS24S4R325 110 aa13.03□□□□□ -0.32
RGP1-202ENST00000496906 A0A1B0GUT8 65 aa13.03□□□□□ -0.32
RGP1-202ENST00000496906 S100PP25815 95 aa13.03□□□□□ -0.32
RGP1-202ENST00000496906 PIK3CD-AS1Q5SR53 167 aa13.03□□□□□ -0.32
RGP1-202ENST00000496906 BORCS7Q96B45 105 aa13.03□□□□□ -0.32
RGP1-202ENST00000496906 NTF3P20783 257 aa13.02□□□□□ -0.33
RGP1-202ENST00000496906 CBLN2Q8IUK8 224 aa13.02□□□□□ -0.33
RGP1-202ENST00000496906 NDUFAF3Q9BU61 184 aa13.02□□□□□ -0.33
RGP1-202ENST00000496906 MSRB1Q9NZV6 116 aa13.02□□□□□ -0.33
RGP1-202ENST00000496906 TEX48A0A1B0GUV7 120 aa13.01□□□□□ -0.33
RGP1-202ENST00000496906 SPART-AS1P0CW21 52 aa13.01□□□□□ -0.33
RGP1-202ENST00000496906 TMEM88Q6PEY1 159 aa13.01□□□□□ -0.33
RGP1-202ENST00000496906 BTF3L4Q96K17 158 aa13.01□□□□□ -0.33
RGP1-202ENST00000496906 SMCO4Q9NRQ5 59 aa13.01□□□□□ -0.33
RGP1-202ENST00000496906 COL7A1Q02388 2944 aa13□□□□□ -0.33
RGP1-202ENST00000496906 TRAV9-1A0A075B6T8 112 aa13□□□□□ -0.33
RGP1-202ENST00000496906 GAGE12BA1L429 117 aa13□□□□□ -0.33
RGP1-202ENST00000496906 SCO1O75880 301 aa13□□□□□ -0.33
RGP1-202ENST00000496906 GAGE7O76087 117 aa13□□□□□ -0.33
RGP1-202ENST00000496906 GAGE12FP0CL80 117 aa13□□□□□ -0.33
RGP1-202ENST00000496906 GAGE12GP0CL81 117 aa13□□□□□ -0.33
RGP1-202ENST00000496906 GAGE12IP0CL82 117 aa13□□□□□ -0.33
RGP1-202ENST00000496906 TWIST1Q15672 202 aa13□□□□□ -0.33
RGP1-202ENST00000496906 DEFB130BP0DP73 79 aa12.99□□□□□ -0.33
RGP1-202ENST00000496906 DEFB130AP0DP74 79 aa12.99□□□□□ -0.33
RGP1-202ENST00000496906 RIGQ13278 110 aa12.99□□□□□ -0.33
RGP1-202ENST00000496906 ELOBQ15370 118 aa12.99□□□□□ -0.33
RGP1-202ENST00000496906 MRPL54Q6P161 138 aaKnown RBP12.99□□□□□ -0.33
RGP1-202ENST00000496906 ATP5L2Q7Z4Y8 100 aa12.99□□□□□ -0.33
RGP1-202ENST00000496906 U3KQK5 164 aa12.99□□□□□ -0.33
RGP1-202ENST00000496906 A0A1B0GXF2 115 aa12.98□□□□□ -0.33
RGP1-202ENST00000496906 C18orf15Q96N68 181 aa12.98□□□□□ -0.33
RGP1-202ENST00000496906 YPEL4Q96NS1 127 aa12.98□□□□□ -0.33
RGP1-202ENST00000496906 JPT2Q9H910 190 aa12.98□□□□□ -0.33
RGP1-202ENST00000496906 POM121L12Q8N7R1 296 aa12.98□□□□□ -0.33
RGP1-202ENST00000496906 AP1S3Q96PC3 154 aa12.98□□□□□ -0.33
RGP1-202ENST00000496906 STAB2Q8WWQ8 2551 aa12.97□□□□□ -0.33
RGP1-202ENST00000496906 TRGV2A0A075B6R0 118 aa12.97□□□□□ -0.33
RGP1-202ENST00000496906 A0A1B0GW15 77 aa12.97□□□□□ -0.33
RGP1-202ENST00000496906 A8MWV9 139 aa12.97□□□□□ -0.33
RGP1-202ENST00000496906 RS1O15537 224 aa12.97□□□□□ -0.33
RGP1-202ENST00000496906 DAD1P61803 113 aa12.97□□□□□ -0.33
RGP1-202ENST00000496906 HBBP68871 147 aa12.97□□□□□ -0.33
RGP1-202ENST00000496906 CFAP126Q5VTH2 177 aa12.97□□□□□ -0.33
RGP1-202ENST00000496906 TRAV4A0A0B4J268 109 aa12.96□□□□□ -0.33
RGP1-202ENST00000496906 TRGC1P0CF51 173 aa12.96□□□□□ -0.33
RGP1-202ENST00000496906 C12orf74Q32Q52 190 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms