RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 FAM210BQ96KR6 192 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 G0S2P27469 103 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 TCL1AP56279 114 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 FAM231DQ6ZW35 169 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 SBSPONQ8IVN8 264 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 FRZBQ92765 325 aa6.32□□□□□ -1.4
U2AF1-212ENST00000496462 BTF3P20290 206 aaKnown RBP6.31□□□□□ -1.4
U2AF1-212ENST00000496462 FAM222AQ5U5X8 452 aa6.31□□□□□ -1.4
U2AF1-212ENST00000496462 NUDT10Q8NFP7 164 aa6.31□□□□□ -1.4
U2AF1-212ENST00000496462 NUDT11Q96G61 164 aa6.31□□□□□ -1.4
U2AF1-212ENST00000496462 LINC00467Q9BRT7 94 aa6.31□□□□□ -1.4
U2AF1-212ENST00000496462 C11orf68Q9H3H3 251 aaKnown RBP6.31□□□□□ -1.4
U2AF1-212ENST00000496462 PAX4O43316 350 aa6.31□□□□□ -1.4
U2AF1-212ENST00000496462 LINC01559Q495D7 138 aa6.31□□□□□ -1.4
U2AF1-212ENST00000496462 TSKUQ8WUA8 353 aa6.31□□□□□ -1.4
U2AF1-212ENST00000496462 GFRA4Q9GZZ7 299 aa6.31□□□□□ -1.4
U2AF1-212ENST00000496462 SMCO4Q9NRQ5 59 aa6.31□□□□□ -1.4
U2AF1-212ENST00000496462 ZFAND2AQ8N6M9 145 aa6.31□□□□□ -1.4
U2AF1-212ENST00000496462 ZC2HC1AQ96GY0 325 aa6.31□□□□□ -1.4
U2AF1-212ENST00000496462 PGLYRP4Q96LB8 373 aa6.31□□□□□ -1.4
U2AF1-212ENST00000496462 A0A0J9YWU9 116 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 PRB4P10163 310 aaPredicted RBP6.3□□□□□ -1.4
U2AF1-212ENST00000496462 CCL18P55774 89 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 TCTAP57738 103 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 RHOHQ15669 191 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 C15orf53Q8NAA6 179 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 TMEM18Q96B42 140 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 TRAV9-1A0A075B6T8 112 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 DEFB131BA0A096LNP1 70 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 TCAPO15273 167 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 SRIP30626 198 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 MRPL23Q16540 153 aaKnown RBP6.3□□□□□ -1.4
U2AF1-212ENST00000496462 IL36BQ9NZH7 164 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 RPL23P62829 140 aaKnown RBP6.3□□□□□ -1.4
U2AF1-212ENST00000496462 OVOL2Q9BRP0 275 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 DPH3P1Q9H4G8 78 aa6.3□□□□□ -1.4
U2AF1-212ENST00000496462 TRAV8-6A0A0B4J262 113 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 NUDT3O95989 172 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 RAB5AP20339 215 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 CAMPP49913 170 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 DAZ2Q13117 558 aaKnown RBP6.29□□□□□ -1.4
U2AF1-212ENST00000496462 ICOSQ9Y6W8 199 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 TRAV9-2A0A087WT02 112 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 IGHV3-53P01767 116 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 TDRG1Q3Y452 100 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 AMTNQ6UX39 209 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 LINC01551Q86U37 167 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 TM2D3Q9BRN9 247 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 DERL1Q9BUN8 251 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 MRPL16Q9NX20 251 aaKnown RBP6.29□□□□□ -1.4
U2AF1-212ENST00000496462 DEFB4AO15263 64 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 TYMSP04818 313 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 DGAT2L7PQ6IED9 249 aa6.29□□□□□ -1.4
U2AF1-212ENST00000496462 UBE2L6O14933 153 aa6.28□□□□□ -1.4
U2AF1-212ENST00000496462 MT-ND6P03923 174 aa6.28□□□□□ -1.4
U2AF1-212ENST00000496462 PIK3CD-AS1Q5SR53 167 aa6.28□□□□□ -1.4
U2AF1-212ENST00000496462 RETNQ9HD89 108 aa6.28□□□□□ -1.4
U2AF1-212ENST00000496462 PRO0255Q9UI72 69 aa6.28□□□□□ -1.4
U2AF1-212ENST00000496462 TRAV4A0A0B4J268 109 aa6.28□□□□□ -1.4
U2AF1-212ENST00000496462 A8MTW9 85 aa6.28□□□□□ -1.4
U2AF1-212ENST00000496462 FCER1GP30273 86 aa6.28□□□□□ -1.4
U2AF1-212ENST00000496462 HBBP68871 147 aa6.28□□□□□ -1.4
U2AF1-212ENST00000496462 ZNF705AQ6ZN79 300 aaPredicted RBP6.28□□□□□ -1.4
U2AF1-212ENST00000496462 RNASE7Q9H1E1 156 aaKnown RBP6.28□□□□□ -1.4
U2AF1-212ENST00000496462 IGLL5B9A064 214 aa6.28□□□□□ -1.4
U2AF1-212ENST00000496462 GNRH2O43555 120 aa6.28□□□□□ -1.4
U2AF1-212ENST00000496462 RNF212Q495C1 297 aa6.28□□□□□ -1.4
U2AF1-212ENST00000496462 ATP5L2Q7Z4Y8 100 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 C1orf158Q8N1D5 194 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 CLRN3Q8NCR9 226 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 PLA2G2EQ9NZK7 142 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 HIGD1CA8MV81 97 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 C3orf84H3BNL1 204 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 PPBPP02775 128 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 OR5AL1P0C617 328 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 ELOBQ15370 118 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 LYZL1Q6UWQ5 148 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 ISOC2Q96AB3 205 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 CKS2P33552 79 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 RAB5BP61020 215 aa6.27□□□□□ -1.41
U2AF1-212ENST00000496462 MRPL54Q6P161 138 aaKnown RBP6.27□□□□□ -1.41
U2AF1-212ENST00000496462 PHLDA1Q8WV24 401 aaPredicted RBP6.27□□□□□ -1.41
U2AF1-212ENST00000496462 IGHV3-16A0A0C4DH30 117 aa6.26□□□□□ -1.41
U2AF1-212ENST00000496462 AMMECR1LQ6DCA0 310 aa6.26□□□□□ -1.41
U2AF1-212ENST00000496462 IMMP2LQ96T52 175 aa6.26□□□□□ -1.41
U2AF1-212ENST00000496462 KIR2DL4Q99706 377 aa6.26□□□□□ -1.41
U2AF1-212ENST00000496462 HLA-DQA1P01909 254 aa6.26□□□□□ -1.41
U2AF1-212ENST00000496462 SPINK4O60575 86 aa6.26□□□□□ -1.41
U2AF1-212ENST00000496462 PMCHP20382 165 aa6.26□□□□□ -1.41
U2AF1-212ENST00000496462 MUC7Q8TAX7 377 aa6.26□□□□□ -1.41
U2AF1-212ENST00000496462 DKK2Q9UBU2 259 aa6.26□□□□□ -1.41
U2AF1-212ENST00000496462 C7orf77A4D0Y5 90 aa6.25□□□□□ -1.41
U2AF1-212ENST00000496462 PGPEP1LA6NFU8 196 aa6.25□□□□□ -1.41
U2AF1-212ENST00000496462 FABP9Q0Z7S8 132 aa6.25□□□□□ -1.41
U2AF1-212ENST00000496462 HHLA3Q9XRX5 114 aa6.25□□□□□ -1.41
U2AF1-212ENST00000496462 ZFP2Q6ZN57 461 aa6.25□□□□□ -1.41
U2AF1-212ENST00000496462 A0A087WWC5 75 aa6.25□□□□□ -1.41
U2AF1-212ENST00000496462 COTL1Q14019 142 aa6.25□□□□□ -1.41
U2AF1-212ENST00000496462 OR10J3Q5JRS4 329 aa6.25□□□□□ -1.41
U2AF1-212ENST00000496462 NEGR1Q7Z3B1 354 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms