RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 MBD3L4A6NDZ8 208 aaPredicted RBP11.53□□□□□ -0.56
MACF1-223ENST00000496360 MBD3L3A6NE82 208 aaPredicted RBP11.53□□□□□ -0.56
MACF1-223ENST00000496360 MBD3L5A6NJ08 208 aaPredicted RBP11.53□□□□□ -0.56
MACF1-223ENST00000496360 CNTFRP26992 372 aa11.53□□□□□ -0.56
MACF1-223ENST00000496360 HERV-K104P63124 156 aa11.53□□□□□ -0.56
MACF1-223ENST00000496360 MBD3L2Q8NHZ7 208 aaPredicted RBP11.53□□□□□ -0.56
MACF1-223ENST00000496360 CREBBPQ92793 2442 aa11.52□□□□□ -0.56
MACF1-223ENST00000496360 SLC25A20O43772 301 aa11.52□□□□□ -0.57
MACF1-223ENST00000496360 Q8TAT8 98 aa11.52□□□□□ -0.57
MACF1-223ENST00000496360 SPANXDQ9BXN6 97 aa11.52□□□□□ -0.57
MACF1-223ENST00000496360 LOXP28300 417 aaPredicted RBP11.51□□□□□ -0.57
MACF1-223ENST00000496360 EFNA4P52798 201 aa11.51□□□□□ -0.57
MACF1-223ENST00000496360 SHISA2Q6UWI4 295 aa11.51□□□□□ -0.57
MACF1-223ENST00000496360 OR10J6PQ8NGY7 276 aa11.51□□□□□ -0.57
MACF1-223ENST00000496360 PRO1854Q9UHT4 67 aa11.51□□□□□ -0.57
MACF1-223ENST00000496360 APCP25054 2843 aa11.51□□□□□ -0.57
MACF1-223ENST00000496360 TMEM178BH3BS89 294 aa11.51□□□□□ -0.57
MACF1-223ENST00000496360 IGLV1-47P01700 117 aa11.51□□□□□ -0.57
MACF1-223ENST00000496360 P0DMU3 169 aa11.51□□□□□ -0.57
MACF1-223ENST00000496360 FAM231AP0DMU4 169 aa11.51□□□□□ -0.57
MACF1-223ENST00000496360 FAM231CP0DMU5 169 aa11.51□□□□□ -0.57
MACF1-223ENST00000496360 RPL13AP40429 203 aaKnown RBP11.51□□□□□ -0.57
MACF1-223ENST00000496360 TRAV8-2A0A0B4J237 113 aa11.5□□□□□ -0.57
MACF1-223ENST00000496360 A0A0J9YY99 117 aa11.5□□□□□ -0.57
MACF1-223ENST00000496360 PPP1R17O96001 155 aa11.5□□□□□ -0.57
MACF1-223ENST00000496360 HIF1ANQ9NWT6 349 aa11.5□□□□□ -0.57
MACF1-223ENST00000496360 TNFRSF18Q9Y5U5 241 aa11.5□□□□□ -0.57
MACF1-223ENST00000496360 C17orf100A8MU93 164 aa11.5□□□□□ -0.57
MACF1-223ENST00000496360 H3BVH4 76 aa11.5□□□□□ -0.57
MACF1-223ENST00000496360 CNIH1O95406 144 aa11.5□□□□□ -0.57
MACF1-223ENST00000496360 BAALCQ8WXS3 180 aa11.5□□□□□ -0.57
MACF1-223ENST00000496360 TMEM126AQ9H061 195 aa11.5□□□□□ -0.57
MACF1-223ENST00000496360 IGHV1-69DA0A0B4J2H0 117 aa11.49□□□□□ -0.57
MACF1-223ENST00000496360 M0R381 172 aa11.49□□□□□ -0.57
MACF1-223ENST00000496360 MRPL53Q96EL3 112 aaKnown RBP11.49□□□□□ -0.57
MACF1-223ENST00000496360 TIMD4Q96H15 378 aa11.49□□□□□ -0.57
MACF1-223ENST00000496360 FBN2P35556 2912 aa11.49□□□□□ -0.57
MACF1-223ENST00000496360 BUB1B-PAK6H3BSN5 160 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 IGHV3-30P01768 117 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 TRGV3P03979 118 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 CFC1BP0CG36 223 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 CFC1P0CG37 223 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 IGHV3-30-5P0DP03 117 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 FBXL19-AS1Q494R0 122 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 SLC25A29Q8N8R3 303 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 CFHR4Q92496 578 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 PLEKHB2Q96CS7 222 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 KIR2DL4Q99706 377 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 ANKHD1Q8IWZ3 2542 aaKnown RBP11.48□□□□□ -0.57
MACF1-223ENST00000496360 LRBAP50851 2863 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 IGKV3D-20A0A0C4DH25 116 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 IGHV7-4-1A0A0J9YVY3 117 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 SUMO2P61956 95 aaKnown RBP11.48□□□□□ -0.57
MACF1-223ENST00000496360 SMIM20Q8N5G0 67 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 RASL10AQ92737 203 aa11.48□□□□□ -0.57
MACF1-223ENST00000496360 RNASE6Q93091 150 aaKnown RBP11.48□□□□□ -0.57
MACF1-223ENST00000496360 MYO9AB2RTY4 2548 aa11.47□□□□□ -0.57
MACF1-223ENST00000496360 ARL3P36405 182 aa11.47□□□□□ -0.57
MACF1-223ENST00000496360 CCL8P80075 99 aa11.47□□□□□ -0.57
MACF1-223ENST00000496360 SPANXN1Q5VSR9 72 aa11.47□□□□□ -0.57
MACF1-223ENST00000496360 MDFICQ9P1T7 246 aa11.47□□□□□ -0.57
MACF1-223ENST00000496360 ONECUT1Q9UBC0 465 aa11.47□□□□□ -0.57
MACF1-223ENST00000496360 DCHS2Q6V1P9 2916 aa11.47□□□□□ -0.57
MACF1-223ENST00000496360 IGLV11-55A0A075B6I3 123 aa11.47□□□□□ -0.57
MACF1-223ENST00000496360 A0A0B4J2C4 111 aa11.47□□□□□ -0.57
MACF1-223ENST00000496360 CCDC179H3BU77 68 aa11.47□□□□□ -0.57
MACF1-223ENST00000496360 TRAV8-4A0A0B4J246 113 aa11.46□□□□□ -0.57
MACF1-223ENST00000496360 TRAV4A0A0B4J268 109 aa11.46□□□□□ -0.57
MACF1-223ENST00000496360 ATXN8Q156A1 80 aa11.46□□□□□ -0.57
MACF1-223ENST00000496360 C2orf66Q6UXQ4 117 aa11.46□□□□□ -0.57
MACF1-223ENST00000496360 DYNAPQ8N1N2 210 aa11.46□□□□□ -0.57
MACF1-223ENST00000496360 C21orf62Q9NYP8 219 aa11.46□□□□□ -0.57
MACF1-223ENST00000496360 SMAD5-AS1Q9Y6J3 95 aa11.46□□□□□ -0.57
MACF1-223ENST00000496360 POLQO75417 2590 aa11.45□□□□□ -0.58
MACF1-223ENST00000496360 C9JAW5 83 aa11.45□□□□□ -0.58
MACF1-223ENST00000496360 CTSZQ9UBR2 303 aa11.45□□□□□ -0.58
MACF1-223ENST00000496360 FAM240AA0A1B0GVK7 77 aa11.44□□□□□ -0.58
MACF1-223ENST00000496360 C11orf86A6NJI1 115 aa11.44□□□□□ -0.58
MACF1-223ENST00000496360 LINC01548A6NM66 108 aa11.44□□□□□ -0.58
MACF1-223ENST00000496360 KRTAP10-9P60411 292 aa11.44□□□□□ -0.58
MACF1-223ENST00000496360 LYPD2Q6UXB3 125 aa11.44□□□□□ -0.58
MACF1-223ENST00000496360 Q8N1Y9 231 aa11.44□□□□□ -0.58
MACF1-223ENST00000496360 NPBQ8NG41 125 aa11.44□□□□□ -0.58
MACF1-223ENST00000496360 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.44□□□□□ -0.58
MACF1-223ENST00000496360 TRAV26-2A0A0B4J265 109 aa11.44□□□□□ -0.58
MACF1-223ENST00000496360 NBR2O15453 112 aa11.44□□□□□ -0.58
MACF1-223ENST00000496360 CLEC3BP05452 202 aa11.44□□□□□ -0.58
MACF1-223ENST00000496360 PRTN3P24158 256 aa11.44□□□□□ -0.58
MACF1-223ENST00000496360 LENEPQ9Y5L5 61 aa11.44□□□□□ -0.58
MACF1-223ENST00000496360 SPG11Q96JI7 2443 aa11.43□□□□□ -0.58
MACF1-223ENST00000496360 F8W735 103 aaPredicted RBP11.43□□□□□ -0.58
MACF1-223ENST00000496360 SFTA2Q6UW10 78 aa11.43□□□□□ -0.58
MACF1-223ENST00000496360 TMEM141Q96I45 108 aa11.43□□□□□ -0.58
MACF1-223ENST00000496360 FANCD2OSQ96PS1 177 aa11.43□□□□□ -0.58
MACF1-223ENST00000496360 DPH3P1Q9H4G8 78 aa11.43□□□□□ -0.58
MACF1-223ENST00000496360 CCDC168Q8NDH2 2452 aa11.42□□□□□ -0.58
MACF1-223ENST00000496360 TACC2O95359 2948 aa11.42□□□□□ -0.58
MACF1-223ENST00000496360 TRBV10-2A0A0K0K1G8 114 aa11.42□□□□□ -0.58
MACF1-223ENST00000496360 LY6LH3BQJ8 138 aa11.42□□□□□ -0.58
MACF1-223ENST00000496360 IGHV3-33P01772 117 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 230.2 ms