RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 TIMM8BQ9Y5J9 83 aaPredicted RBP12.11□□□□□ -0.47
SNX17-209ENST00000494893 V9GYV3 84 aa12.11□□□□□ -0.47
SNX17-209ENST00000494893 IGHV4-4A0A075B6R2 117 aa12.1□□□□□ -0.47
SNX17-209ENST00000494893 DEFB130BP0DP73 79 aa12.1□□□□□ -0.47
SNX17-209ENST00000494893 DEFB130AP0DP74 79 aa12.1□□□□□ -0.47
SNX17-209ENST00000494893 ANXA2RQ3ZCQ2 193 aa12.1□□□□□ -0.47
SNX17-209ENST00000494893 IGHV1OR15-1A0A075B7D0 117 aa12.09□□□□□ -0.47
SNX17-209ENST00000494893 RPP21Q9H633 154 aaKnown RBP12.09□□□□□ -0.47
SNX17-209ENST00000494893 GSN-AS1Q9NRJ2 163 aa12.09□□□□□ -0.47
SNX17-209ENST00000494893 CBY3A6NI87 242 aa12.08□□□□□ -0.48
SNX17-209ENST00000494893 HTN3P15516 51 aa12.08□□□□□ -0.48
SNX17-209ENST00000494893 CT83Q5H943 113 aa12.08□□□□□ -0.48
SNX17-209ENST00000494893 MUC21Q5SSG8 566 aa12.08□□□□□ -0.48
SNX17-209ENST00000494893 OR2D3Q8NGH3 330 aa12.08□□□□□ -0.48
SNX17-209ENST00000494893 C11orf21Q9P2W6 132 aa12.08□□□□□ -0.48
SNX17-209ENST00000494893 SCO1O75880 301 aa12.07□□□□□ -0.48
SNX17-209ENST00000494893 ORM1P02763 201 aa12.07□□□□□ -0.48
SNX17-209ENST00000494893 TCTAP57738 103 aa12.07□□□□□ -0.48
SNX17-209ENST00000494893 DAZ2Q13117 558 aaKnown RBP12.07□□□□□ -0.48
SNX17-209ENST00000494893 LINC01559Q495D7 138 aa12.07□□□□□ -0.48
SNX17-209ENST00000494893 IGKV3D-20A0A0C4DH25 116 aa12.06□□□□□ -0.48
SNX17-209ENST00000494893 SNURFLB1AK76 121 aa12.06□□□□□ -0.48
SNX17-209ENST00000494893 LY6G6CO95867 125 aa12.06□□□□□ -0.48
SNX17-209ENST00000494893 TCL1AP56279 114 aa12.06□□□□□ -0.48
SNX17-209ENST00000494893 RPS20P60866 119 aaKnown RBP12.06□□□□□ -0.48
SNX17-209ENST00000494893 RPL19P84098 196 aaKnown RBP12.06□□□□□ -0.48
SNX17-209ENST00000494893 Q6ZTI0 123 aa12.06□□□□□ -0.48
SNX17-209ENST00000494893 IMMP2LQ96T52 175 aa12.06□□□□□ -0.48
SNX17-209ENST00000494893 SMCO4Q9NRQ5 59 aa12.06□□□□□ -0.48
SNX17-209ENST00000494893 IL36BQ9NZH7 164 aa12.06□□□□□ -0.48
SNX17-209ENST00000494893 GAGE12BA1L429 117 aa12.05□□□□□ -0.48
SNX17-209ENST00000494893 A8MWL6 223 aa12.05□□□□□ -0.48
SNX17-209ENST00000494893 GAGE7O76087 117 aa12.05□□□□□ -0.48
SNX17-209ENST00000494893 GAGE12FP0CL80 117 aa12.05□□□□□ -0.48
SNX17-209ENST00000494893 GAGE12GP0CL81 117 aa12.05□□□□□ -0.48
SNX17-209ENST00000494893 GAGE12IP0CL82 117 aa12.05□□□□□ -0.48
SNX17-209ENST00000494893 LGALS9CQ6DKI2 356 aa12.05□□□□□ -0.48
SNX17-209ENST00000494893 ZNF575Q86XF7 245 aa12.05□□□□□ -0.48
SNX17-209ENST00000494893 TSKUQ8WUA8 353 aa12.05□□□□□ -0.48
SNX17-209ENST00000494893 SMIM27A0A1W2PRY6 76 aa12.04□□□□□ -0.48
SNX17-209ENST00000494893 XKRY2A2RUG3 117 aa12.04□□□□□ -0.48
SNX17-209ENST00000494893 TDRG1Q3Y452 100 aa12.04□□□□□ -0.48
SNX17-209ENST00000494893 TMEM88Q6PEY1 159 aa12.04□□□□□ -0.48
SNX17-209ENST00000494893 MDFICQ9P1T7 246 aa12.04□□□□□ -0.48
SNX17-209ENST00000494893 NAGKQ9UJ70 344 aa12.04□□□□□ -0.48
SNX17-209ENST00000494893 KMT2AQ03164 3969 aa12.03□□□□□ -0.48
SNX17-209ENST00000494893 TMSB15BA0A087X1C1 80 aa12.03□□□□□ -0.48
SNX17-209ENST00000494893 FAM231BA6NCW3 169 aa12.03□□□□□ -0.48
SNX17-209ENST00000494893 SPINK4O60575 86 aa12.03□□□□□ -0.48
SNX17-209ENST00000494893 ATP5G1P05496 136 aa12.03□□□□□ -0.48
SNX17-209ENST00000494893 FAM159AQ6UWV7 190 aa12.03□□□□□ -0.48
SNX17-209ENST00000494893 CBLN2Q8IUK8 224 aa12.03□□□□□ -0.48
SNX17-209ENST00000494893 KCNS1Q96KK3 526 aa12.03□□□□□ -0.48
SNX17-209ENST00000494893 NDUFAF3Q9BU61 184 aa12.03□□□□□ -0.48
SNX17-209ENST00000494893 GFRA4Q9GZZ7 299 aa12.03□□□□□ -0.48
SNX17-209ENST00000494893 DNAH6Q9C0G6 4158 aa12.02□□□□□ -0.48
SNX17-209ENST00000494893 GNRH2O43555 120 aa12.02□□□□□ -0.49
SNX17-209ENST00000494893 CXCL1P09341 107 aa12.02□□□□□ -0.49
SNX17-209ENST00000494893 GZMBP10144 247 aa12.02□□□□□ -0.49
SNX17-209ENST00000494893 GTSF1Q8WW33 167 aa12.02□□□□□ -0.49
SNX17-209ENST00000494893 FAM210BQ96KR6 192 aa12.02□□□□□ -0.49
SNX17-209ENST00000494893 GRIFINA4D1Z8 144 aa12.01□□□□□ -0.49
SNX17-209ENST00000494893 F5H768 121 aa12.01□□□□□ -0.49
SNX17-209ENST00000494893 HOXA5P20719 270 aa12.01□□□□□ -0.49
SNX17-209ENST00000494893 S100PP25815 95 aa12.01□□□□□ -0.49
SNX17-209ENST00000494893 FOXA3P55318 350 aaPredicted RBP12.01□□□□□ -0.49
SNX17-209ENST00000494893 DNLZQ5SXM8 178 aa12.01□□□□□ -0.49
SNX17-209ENST00000494893 KCNIP4Q6PIL6 250 aa12.01□□□□□ -0.49
SNX17-209ENST00000494893 MRPL16Q9NX20 251 aaKnown RBP12.01□□□□□ -0.49
SNX17-209ENST00000494893 TRGV1A0A0A0MS02 117 aa12□□□□□ -0.49
SNX17-209ENST00000494893 IGHV3-16A0A0C4DH30 117 aa12□□□□□ -0.49
SNX17-209ENST00000494893 TYMSP04818 313 aa12□□□□□ -0.49
SNX17-209ENST00000494893 FAM3BP58499 235 aaPredicted RBP12□□□□□ -0.49
SNX17-209ENST00000494893 ZNF415Q09FC8 603 aa12□□□□□ -0.49
SNX17-209ENST00000494893 C18orf15Q96N68 181 aa12□□□□□ -0.49
SNX17-209ENST00000494893 YPEL4Q96NS1 127 aa12□□□□□ -0.49
SNX17-209ENST00000494893 NAT8BQ9UHF3 227 aa12□□□□□ -0.49
SNX17-209ENST00000494893 URGCP-MRPS24S4R325 110 aa12□□□□□ -0.49
SNX17-209ENST00000494893 A0A1W2PPQ1 181 aa11.99□□□□□ -0.49
SNX17-209ENST00000494893 HIGD1CA8MV81 97 aa11.99□□□□□ -0.49
SNX17-209ENST00000494893 IGLC6P0CF74 106 aa11.99□□□□□ -0.49
SNX17-209ENST00000494893 ELOBQ15370 118 aa11.99□□□□□ -0.49
SNX17-209ENST00000494893 NUP35Q8NFH5 326 aa11.99□□□□□ -0.49
SNX17-209ENST00000494893 TRGV11A0A075B6L2 103 aa11.98□□□□□ -0.49
SNX17-209ENST00000494893 TRAV9-1A0A075B6T8 112 aa11.98□□□□□ -0.49
SNX17-209ENST00000494893 ASIPP42127 132 aa11.98□□□□□ -0.49
SNX17-209ENST00000494893 LGALS9BQ3B8N2 356 aa11.98□□□□□ -0.49
SNX17-209ENST00000494893 FER1L6-AS1Q8NA97 138 aa11.98□□□□□ -0.49
SNX17-209ENST00000494893 MED14OSP0DP75 135 aa11.97□□□□□ -0.49
SNX17-209ENST00000494893 PGLYRP4Q96LB8 373 aa11.97□□□□□ -0.49
SNX17-209ENST00000494893 SSBP4Q9BWG4 385 aaPredicted RBP11.97□□□□□ -0.49
SNX17-209ENST00000494893 TRBV24-1A0A075B6N3 115 aa11.96□□□□□ -0.49
SNX17-209ENST00000494893 TRGV2A0A075B6R0 118 aa11.96□□□□□ -0.49
SNX17-209ENST00000494893 F2Z2F3 143 aa11.96□□□□□ -0.49
SNX17-209ENST00000494893 OR5AL1P0C617 328 aa11.96□□□□□ -0.49
SNX17-209ENST00000494893 S100A4P26447 101 aaKnown RBP11.96□□□□□ -0.49
SNX17-209ENST00000494893 CTRLP40313 264 aa11.96□□□□□ -0.49
SNX17-209ENST00000494893 LYZL1Q6UWQ5 148 aa11.96□□□□□ -0.49
SNX17-209ENST00000494893 BTF3L4Q96K17 158 aa11.96□□□□□ -0.49
SNX17-209ENST00000494893 SPXQ9BT56 116 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms