RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 S100A4P26447 101 aaKnown RBP10.3□□□□□ -0.76
VPS26A-205ENST00000489656 APOC4P55056 127 aa10.3□□□□□ -0.76
VPS26A-205ENST00000489656 C9orf85Q96MD7 179 aa10.3□□□□□ -0.76
VPS26A-205ENST00000489656 LINC01587Q99440 93 aa10.3□□□□□ -0.76
VPS26A-205ENST00000489656 TPPP3Q9BW30 176 aa10.3□□□□□ -0.76
VPS26A-205ENST00000489656 GOLT1BQ9Y3E0 138 aa10.3□□□□□ -0.76
VPS26A-205ENST00000489656 NXPH4O95158 308 aa10.29□□□□□ -0.76
VPS26A-205ENST00000489656 HLA-DQA1P01909 254 aa10.29□□□□□ -0.76
VPS26A-205ENST00000489656 FRMD6-AS1P0C7T7 363 aa10.29□□□□□ -0.76
VPS26A-205ENST00000489656 KPRPQ5T749 579 aaPredicted RBP10.29□□□□□ -0.76
VPS26A-205ENST00000489656 ZNF705AQ6ZN79 300 aaPredicted RBP10.29□□□□□ -0.76
VPS26A-205ENST00000489656 TMEM136Q6ZRR5 245 aa10.29□□□□□ -0.76
VPS26A-205ENST00000489656 CBY3A6NI87 242 aa10.28□□□□□ -0.76
VPS26A-205ENST00000489656 IGHV4-30-4P0DP06 118 aa10.28□□□□□ -0.76
VPS26A-205ENST00000489656 ZNF493Q6ZR52 646 aa10.28□□□□□ -0.76
VPS26A-205ENST00000489656 OR10AG1Q8NH19 301 aa10.28□□□□□ -0.76
VPS26A-205ENST00000489656 TMEM208Q9BTX3 173 aa10.28□□□□□ -0.76
VPS26A-205ENST00000489656 NACAE9PAV3 2078 aa10.28□□□□□ -0.76
VPS26A-205ENST00000489656 SNURFLB1AK76 121 aa10.27□□□□□ -0.77
VPS26A-205ENST00000489656 UBE2CO00762 179 aa10.27□□□□□ -0.77
VPS26A-205ENST00000489656 PHOX2AO14813 284 aa10.27□□□□□ -0.77
VPS26A-205ENST00000489656 NTF3P20783 257 aa10.27□□□□□ -0.77
VPS26A-205ENST00000489656 CAMPP49913 170 aa10.27□□□□□ -0.77
VPS26A-205ENST00000489656 ZNF415Q09FC8 603 aa10.27□□□□□ -0.77
VPS26A-205ENST00000489656 MDFICQ9P1T7 246 aa10.27□□□□□ -0.77
VPS26A-205ENST00000489656 PHLDA3Q9Y5J5 127 aa10.27□□□□□ -0.77
VPS26A-205ENST00000489656 TRGC2P03986 189 aa10.26□□□□□ -0.77
VPS26A-205ENST00000489656 ZFP82Q8N141 532 aa10.26□□□□□ -0.77
VPS26A-205ENST00000489656 C11orf72Q8NBR9 251 aa10.26□□□□□ -0.77
VPS26A-205ENST00000489656 PTH2Q96A98 100 aa10.26□□□□□ -0.77
VPS26A-205ENST00000489656 TRAPPC1Q9Y5R8 145 aa10.26□□□□□ -0.77
VPS26A-205ENST00000489656 C1orf196B1AJZ1 125 aa10.25□□□□□ -0.77
VPS26A-205ENST00000489656 TWIST1Q15672 202 aa10.25□□□□□ -0.77
VPS26A-205ENST00000489656 PIK3CD-AS1Q5SR53 167 aa10.25□□□□□ -0.77
VPS26A-205ENST00000489656 SPANXN1Q5VSR9 72 aa10.25□□□□□ -0.77
VPS26A-205ENST00000489656 IL17DQ8TAD2 202 aa10.25□□□□□ -0.77
VPS26A-205ENST00000489656 RNASE8Q8TDE3 154 aaKnown RBP10.25□□□□□ -0.77
VPS26A-205ENST00000489656 TMEM263Q8WUH6 116 aaKnown RBP10.25□□□□□ -0.77
VPS26A-205ENST00000489656 SPXQ9BT56 116 aa10.25□□□□□ -0.77
VPS26A-205ENST00000489656 TMEM191AQ9H0A3 160 aa10.25□□□□□ -0.77
VPS26A-205ENST00000489656 MRPL18Q9H0U6 180 aaKnown RBP10.25□□□□□ -0.77
VPS26A-205ENST00000489656 NBEAL1Q6ZS30 2694 aa10.25□□□□□ -0.77
VPS26A-205ENST00000489656 MUC21A0A0G2JKD1 596 aa10.24□□□□□ -0.77
VPS26A-205ENST00000489656 MUC21A0A140T8X8 626 aa10.24□□□□□ -0.77
VPS26A-205ENST00000489656 RAB4BP61018 213 aa10.24□□□□□ -0.77
VPS26A-205ENST00000489656 FABP9Q0Z7S8 132 aa10.24□□□□□ -0.77
VPS26A-205ENST00000489656 MSRB1Q9NZV6 116 aa10.24□□□□□ -0.77
VPS26A-205ENST00000489656 TIMM8BQ9Y5J9 83 aaPredicted RBP10.24□□□□□ -0.77
VPS26A-205ENST00000489656 NOTCH1P46531 2555 aa10.24□□□□□ -0.77
VPS26A-205ENST00000489656 IGHV3OR16-12A0A075B7B8 117 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 SMIM9A6NGZ8 99 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 TRGC1P0CF51 173 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 HTN1P15515 57 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 RAB5BP61020 215 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 TNP2Q05952 138 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 SLAQ13239 276 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 Q6ZWC4 215 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 SYT8Q8NBV8 401 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 FRZBQ92765 325 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 C16orf74Q96GX8 76 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 NDUFAF3Q9BU61 184 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 MGAM2Q2M2H8 2515 aa10.23□□□□□ -0.77
VPS26A-205ENST00000489656 M0R2P5 195 aa10.22□□□□□ -0.77
VPS26A-205ENST00000489656 M0R381 172 aa10.22□□□□□ -0.77
VPS26A-205ENST00000489656 APCSP02743 223 aa10.22□□□□□ -0.77
VPS26A-205ENST00000489656 PRM2P04554 102 aa10.22□□□□□ -0.77
VPS26A-205ENST00000489656 AZU1P20160 251 aa10.22□□□□□ -0.77
VPS26A-205ENST00000489656 RRN3P1Q2M238 152 aa10.22□□□□□ -0.77
VPS26A-205ENST00000489656 FAM104BQ5XKR9 115 aa10.22□□□□□ -0.77
VPS26A-205ENST00000489656 SMIM15Q7Z3B0 74 aa10.22□□□□□ -0.77
VPS26A-205ENST00000489656 RCHY1Q96PM5 261 aa10.22□□□□□ -0.77
VPS26A-205ENST00000489656 GSN-AS1Q9NRJ2 163 aa10.22□□□□□ -0.77
VPS26A-205ENST00000489656 SPRY2O43597 315 aa10.21□□□□□ -0.77
VPS26A-205ENST00000489656 SSTP61278 116 aa10.21□□□□□ -0.77
VPS26A-205ENST00000489656 AP1S3Q96PC3 154 aa10.21□□□□□ -0.77
VPS26A-205ENST00000489656 X6R8D5 127 aa10.21□□□□□ -0.77
VPS26A-205ENST00000489656 PLAC8L1A1L4L8 177 aa10.2□□□□□ -0.78
VPS26A-205ENST00000489656 LORP23490 312 aaPredicted RBP10.2□□□□□ -0.78
VPS26A-205ENST00000489656 DAZ2Q13117 558 aaKnown RBP10.2□□□□□ -0.78
VPS26A-205ENST00000489656 DEFB135Q30KP9 77 aa10.2□□□□□ -0.78
VPS26A-205ENST00000489656 RNF183Q96D59 192 aa10.2□□□□□ -0.78
VPS26A-205ENST00000489656 HIST1H2BKO60814 126 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 HIST1H2BJP06899 126 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 EVI2AP22794 236 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 HIST1H2BOP23527 126 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 HIST1H2BBP33778 126 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 HIST1H2BDP58876 126 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 HIST1H2BCP62807 126 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 HIST2H2BEQ16778 126 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 LGALS9BQ3B8N2 356 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 ZNF876PQ49A33 203 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.19□□□□□ -0.78
VPS26A-205ENST00000489656 POM121L12Q8N7R1 296 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 RASL10AQ92737 203 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 HIST1H2BHQ93079 126 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 RNF185Q96GF1 192 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 HIST1H2BNQ99877 126 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 HIST1H2BMQ99879 126 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 OVOL2Q9BRP0 275 aa10.19□□□□□ -0.78
VPS26A-205ENST00000489656 DPH3P1Q9H4G8 78 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms