RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 GZMBP10144 247 aa7.74□□□□□ -1.17
USP11-209ENST00000488848 RPL35AP18077 110 aaKnown RBP7.74□□□□□ -1.17
USP11-209ENST00000488848 RAB5AP20339 215 aa7.74□□□□□ -1.17
USP11-209ENST00000488848 TCL1AP56279 114 aa7.74□□□□□ -1.17
USP11-209ENST00000488848 HBBP68871 147 aa7.74□□□□□ -1.17
USP11-209ENST00000488848 DAZ2Q13117 558 aaKnown RBP7.74□□□□□ -1.17
USP11-209ENST00000488848 RIGQ13278 110 aa7.74□□□□□ -1.17
USP11-209ENST00000488848 LYZL1Q6UWQ5 148 aa7.74□□□□□ -1.17
USP11-209ENST00000488848 SPXQ9BT56 116 aa7.74□□□□□ -1.17
USP11-209ENST00000488848 PLAC8L1A1L4L8 177 aa7.73□□□□□ -1.17
USP11-209ENST00000488848 HLA-DQA1P01909 254 aa7.73□□□□□ -1.17
USP11-209ENST00000488848 ARMS2P0C7Q2 107 aa7.73□□□□□ -1.17
USP11-209ENST00000488848 FXYD7P58549 80 aa7.73□□□□□ -1.17
USP11-209ENST00000488848 ZNF415Q09FC8 603 aa7.73□□□□□ -1.17
USP11-209ENST00000488848 MUC21Q5SSG8 566 aa7.73□□□□□ -1.17
USP11-209ENST00000488848 POM121L12Q8N7R1 296 aa7.73□□□□□ -1.17
USP11-209ENST00000488848 FRZBQ92765 325 aa7.73□□□□□ -1.17
USP11-209ENST00000488848 RNF183Q96D59 192 aa7.73□□□□□ -1.17
USP11-209ENST00000488848 C16orf74Q96GX8 76 aa7.73□□□□□ -1.17
USP11-209ENST00000488848 X6R8D5 127 aa7.73□□□□□ -1.17
USP11-209ENST00000488848 COL7A1Q02388 2944 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 TMSB15BA0A087X1C1 80 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 GRIFINA4D1Z8 144 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 H3BVH4 76 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 GNRH2O43555 120 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 LGALS9BQ3B8N2 356 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 TMEM136Q6ZRR5 245 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 ZFP82Q8N141 532 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 OR10AG1Q8NH19 301 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 BORCS7Q96B45 105 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 PGLYRP4Q96LB8 373 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 C18orf15Q96N68 181 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 LINC01587Q99440 93 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 OVOL2Q9BRP0 275 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 TMEM191AQ9H0A3 160 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 MDFICQ9P1T7 246 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 NAGKQ9UJ70 344 aa7.72□□□□□ -1.17
USP11-209ENST00000488848 CBY3A6NI87 242 aa7.71□□□□□ -1.18
USP11-209ENST00000488848 K7EIL1 84 aa7.71□□□□□ -1.18
USP11-209ENST00000488848 FRMD6-AS1P0C7T7 363 aa7.71□□□□□ -1.18
USP11-209ENST00000488848 S100A4P26447 101 aaKnown RBP7.71□□□□□ -1.18
USP11-209ENST00000488848 LINC00612Q8N6U2 182 aa7.71□□□□□ -1.18
USP11-209ENST00000488848 RASL10AQ92737 203 aa7.71□□□□□ -1.18
USP11-209ENST00000488848 EDA2RQ9HAV5 297 aa7.71□□□□□ -1.18
USP11-209ENST00000488848 M0R2P5 195 aa7.7□□□□□ -1.18
USP11-209ENST00000488848 SPINK4O60575 86 aa7.7□□□□□ -1.18
USP11-209ENST00000488848 MIFP14174 115 aa7.7□□□□□ -1.18
USP11-209ENST00000488848 NTF3P20783 257 aa7.7□□□□□ -1.18
USP11-209ENST00000488848 RRN3P1Q2M238 152 aa7.7□□□□□ -1.18
USP11-209ENST00000488848 TMEM208Q9BTX3 173 aa7.7□□□□□ -1.18
USP11-209ENST00000488848 PHLDA3Q9Y5J5 127 aa7.7□□□□□ -1.18
USP11-209ENST00000488848 KIF25-AS1Q9Y6Z4 181 aa7.7□□□□□ -1.18
USP11-209ENST00000488848 TRGC1P0CF51 173 aa7.69□□□□□ -1.18
USP11-209ENST00000488848 MRPL54Q6P161 138 aaKnown RBP7.69□□□□□ -1.18
USP11-209ENST00000488848 SYT8Q8NBV8 401 aa7.69□□□□□ -1.18
USP11-209ENST00000488848 AP1S3Q96PC3 154 aa7.69□□□□□ -1.18
USP11-209ENST00000488848 RCHY1Q96PM5 261 aa7.69□□□□□ -1.18
USP11-209ENST00000488848 GSN-AS1Q9NRJ2 163 aa7.69□□□□□ -1.18
USP11-209ENST00000488848 NACAE9PAV3 2078 aa7.68□□□□□ -1.18
USP11-209ENST00000488848 CIDEAO60543 219 aa7.68□□□□□ -1.18
USP11-209ENST00000488848 AZU1P20160 251 aa7.68□□□□□ -1.18
USP11-209ENST00000488848 LINC00315P59091 139 aa7.68□□□□□ -1.18
USP11-209ENST00000488848 SPANXN1Q5VSR9 72 aa7.68□□□□□ -1.18
USP11-209ENST00000488848 FAM104BQ5XKR9 115 aa7.68□□□□□ -1.18
USP11-209ENST00000488848 UFSP1Q6NVU6 142 aa7.68□□□□□ -1.18
USP11-209ENST00000488848 Q8NAQ8 132 aa7.68□□□□□ -1.18
USP11-209ENST00000488848 TM2D3Q9BRN9 247 aa7.68□□□□□ -1.18
USP11-209ENST00000488848 C11orf68Q9H3H3 251 aaKnown RBP7.68□□□□□ -1.18
USP11-209ENST00000488848 U3KQK5 164 aa7.68□□□□□ -1.18
USP11-209ENST00000488848 LYRM9A8MSI8 78 aa7.67□□□□□ -1.18
USP11-209ENST00000488848 A8MWV9 139 aa7.67□□□□□ -1.18
USP11-209ENST00000488848 SNURFLB1AK76 121 aa7.67□□□□□ -1.18
USP11-209ENST00000488848 PPBPP02775 128 aa7.67□□□□□ -1.18
USP11-209ENST00000488848 TWIST1Q15672 202 aa7.67□□□□□ -1.18
USP11-209ENST00000488848 DEFB135Q30KP9 77 aa7.67□□□□□ -1.18
USP11-209ENST00000488848 ZFP2Q6ZN57 461 aa7.67□□□□□ -1.18
USP11-209ENST00000488848 TPPP3Q9BW30 176 aa7.67□□□□□ -1.18
USP11-209ENST00000488848 MSRB1Q9NZV6 116 aa7.67□□□□□ -1.18
USP11-209ENST00000488848 TIMM8BQ9Y5J9 83 aaPredicted RBP7.67□□□□□ -1.18
USP11-209ENST00000488848 TEX48A0A1B0GUV7 120 aa7.66□□□□□ -1.18
USP11-209ENST00000488848 M0R381 172 aa7.66□□□□□ -1.18
USP11-209ENST00000488848 RHODO00212 210 aa7.66□□□□□ -1.18
USP11-209ENST00000488848 CRYGDP07320 174 aa7.66□□□□□ -1.18
USP11-209ENST00000488848 RPS10P46783 165 aaKnown RBP7.66□□□□□ -1.18
USP11-209ENST00000488848 SLAQ13239 276 aa7.66□□□□□ -1.18
USP11-209ENST00000488848 ZNF876PQ49A33 203 aa7.66□□□□□ -1.18
USP11-209ENST00000488848 SMIM15Q7Z3B0 74 aa7.66□□□□□ -1.18
USP11-209ENST00000488848 RNF185Q96GF1 192 aa7.66□□□□□ -1.18
USP11-209ENST00000488848 MRPL18Q9H0U6 180 aaKnown RBP7.66□□□□□ -1.18
USP11-209ENST00000488848 DPH3P1Q9H4G8 78 aa7.66□□□□□ -1.18
USP11-209ENST00000488848 LAMTOR2Q9Y2Q5 125 aa7.66□□□□□ -1.18
USP11-209ENST00000488848 DNAH7Q8WXX0 4024 aa7.66□□□□□ -1.18
USP11-209ENST00000488848 DYNC2H1Q8NCM8 4307 aaKnown RBP7.65□□□□□ -1.18
USP11-209ENST00000488848 RS1O15537 224 aa7.65□□□□□ -1.18
USP11-209ENST00000488848 TRGC2P03986 189 aa7.65□□□□□ -1.18
USP11-209ENST00000488848 CAMPP49913 170 aa7.65□□□□□ -1.18
USP11-209ENST00000488848 COA6Q5JTJ3 125 aaKnown RBP7.65□□□□□ -1.18
USP11-209ENST00000488848 OR11H2Q8NH07 326 aa7.65□□□□□ -1.18
USP11-209ENST00000488848 MRAP2Q96G30 205 aa7.65□□□□□ -1.18
USP11-209ENST00000488848 TRAPPC1Q9Y5R8 145 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms