RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 ATP5SQ99766 215 aa9.92□□□□□ -0.82
MCF2L-228ENST00000487354 SAMD10Q9BYL1 202 aa9.92□□□□□ -0.82
MCF2L-228ENST00000487354 KCNIP2Q9NS61 270 aa9.92□□□□□ -0.82
MCF2L-228ENST00000487354 OR5AC2Q9NZP5 309 aa9.92□□□□□ -0.82
MCF2L-228ENST00000487354 IGKV2D-24A0A075B6R9 120 aa9.91□□□□□ -0.82
MCF2L-228ENST00000487354 KHDC3LQ587J8 217 aa9.91□□□□□ -0.82
MCF2L-228ENST00000487354 NIT1Q86X76 327 aa9.91□□□□□ -0.82
MCF2L-228ENST00000487354 CYB561D1Q8N8Q1 229 aa9.91□□□□□ -0.82
MCF2L-228ENST00000487354 SGK494Q96LW2 274 aa9.91□□□□□ -0.82
MCF2L-228ENST00000487354 ARL6IP6Q8N6S5 226 aa9.9□□□□□ -0.82
MCF2L-228ENST00000487354 C14orf178Q8N769 122 aaPredicted RBP9.9□□□□□ -0.82
MCF2L-228ENST00000487354 MBD2Q9UBB5 411 aa9.9□□□□□ -0.82
MCF2L-228ENST00000487354 PANO1I0J062 215 aa9.89□□□□□ -0.83
MCF2L-228ENST00000487354 FFAR4Q5NUL3 377 aa9.89□□□□□ -0.83
MCF2L-228ENST00000487354 ZFP2Q6ZN57 461 aa9.89□□□□□ -0.83
MCF2L-228ENST00000487354 CMTM2Q8TAZ6 248 aa9.89□□□□□ -0.83
MCF2L-228ENST00000487354 RMI2Q96E14 147 aa9.89□□□□□ -0.83
MCF2L-228ENST00000487354 NMES1Q9C002 83 aa9.89□□□□□ -0.83
MCF2L-228ENST00000487354 JPT2Q9H910 190 aa9.89□□□□□ -0.83
MCF2L-228ENST00000487354 KLK12Q9UKR0 248 aa9.89□□□□□ -0.83
MCF2L-228ENST00000487354 CCDC160A6NGH7 325 aa9.88□□□□□ -0.83
MCF2L-228ENST00000487354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.88□□□□□ -0.83
MCF2L-228ENST00000487354 A0A087WWC5 75 aa9.87□□□□□ -0.83
MCF2L-228ENST00000487354 C17orf112F2Z3M2 114 aa9.87□□□□□ -0.83
MCF2L-228ENST00000487354 SIX6O95475 246 aa9.87□□□□□ -0.83
MCF2L-228ENST00000487354 GCGP01275 180 aa9.87□□□□□ -0.83
MCF2L-228ENST00000487354 TAS2R45P59539 299 aa9.87□□□□□ -0.83
MCF2L-228ENST00000487354 OR2T35Q8NGX2 323 aa9.87□□□□□ -0.83
MCF2L-228ENST00000487354 UBE2WQ96B02 151 aa9.87□□□□□ -0.83
MCF2L-228ENST00000487354 H2AFB2P0C5Z0 115 aa9.86□□□□□ -0.83
MCF2L-228ENST00000487354 SH3BGRL3Q9H299 93 aa9.86□□□□□ -0.83
MCF2L-228ENST00000487354 IGKV3D-20A0A0C4DH25 116 aa9.85□□□□□ -0.83
MCF2L-228ENST00000487354 A8MWV9 139 aa9.85□□□□□ -0.83
MCF2L-228ENST00000487354 TAAR5O14804 337 aa9.85□□□□□ -0.83
MCF2L-228ENST00000487354 LRRC37A5PQ49AS3 106 aa9.85□□□□□ -0.83
MCF2L-228ENST00000487354 FAM74A1Q5RGS3 127 aa9.85□□□□□ -0.83
MCF2L-228ENST00000487354 PIK3CD-AS1Q5SR53 167 aa9.85□□□□□ -0.83
MCF2L-228ENST00000487354 TCRAP04437 139 aa9.84□□□□□ -0.83
MCF2L-228ENST00000487354 ENHOQ6UWT2 76 aa9.84□□□□□ -0.83
MCF2L-228ENST00000487354 PQLC2Q6ZP29 291 aa9.84□□□□□ -0.83
MCF2L-228ENST00000487354 RAB2AP61019 212 aa9.83□□□□□ -0.84
MCF2L-228ENST00000487354 Q6ZRU5 148 aa9.83□□□□□ -0.84
MCF2L-228ENST00000487354 NDFIP1Q9BT67 221 aa9.83□□□□□ -0.84
MCF2L-228ENST00000487354 CHCHD7Q9BUK0 85 aa9.83□□□□□ -0.84
MCF2L-228ENST00000487354 PSG8Q9UQ74 426 aa9.83□□□□□ -0.84
MCF2L-228ENST00000487354 HSPB11Q9Y547 144 aa9.83□□□□□ -0.84
MCF2L-228ENST00000487354 URGCP-MRPS24S4R325 110 aa9.83□□□□□ -0.84
MCF2L-228ENST00000487354 USP17L23D6RBM5 183 aa9.82□□□□□ -0.84
MCF2L-228ENST00000487354 HMGB3O15347 200 aaKnown RBP9.82□□□□□ -0.84
MCF2L-228ENST00000487354 PRSS1P07477 247 aa9.82□□□□□ -0.84
MCF2L-228ENST00000487354 FGF8P55075 233 aaPredicted RBP9.82□□□□□ -0.84
MCF2L-228ENST00000487354 LGALSLQ3ZCW2 172 aaPredicted RBP9.82□□□□□ -0.84
MCF2L-228ENST00000487354 C14orf177Q52M58 125 aa9.82□□□□□ -0.84
MCF2L-228ENST00000487354 OR10G9Q8NGN4 311 aa9.82□□□□□ -0.84
MCF2L-228ENST00000487354 WFDC1Q9HC57 220 aa9.82□□□□□ -0.84
MCF2L-228ENST00000487354 SERTM2A0A1B0GWG4 89 aa9.81□□□□□ -0.84
MCF2L-228ENST00000487354 SEC11BP0C7V7 166 aa9.81□□□□□ -0.84
MCF2L-228ENST00000487354 ODF1Q14990 250 aa9.81□□□□□ -0.84
MCF2L-228ENST00000487354 DMRTA1Q5VZB9 504 aa9.81□□□□□ -0.84
MCF2L-228ENST00000487354 C9orf163Q8N9P6 203 aa9.81□□□□□ -0.84
MCF2L-228ENST00000487354 C5orf17Q8NAS9 161 aa9.81□□□□□ -0.84
MCF2L-228ENST00000487354 OR10G7Q8NGN6 311 aa9.81□□□□□ -0.84
MCF2L-228ENST00000487354 SUN5Q8TC36 379 aa9.81□□□□□ -0.84
MCF2L-228ENST00000487354 SMIM3Q9BZL3 60 aa9.81□□□□□ -0.84
MCF2L-228ENST00000487354 ARL14EPLP0DKL9 152 aa9.8□□□□□ -0.84
MCF2L-228ENST00000487354 H2BFSP57053 126 aa9.8□□□□□ -0.84
MCF2L-228ENST00000487354 FLI1Q01543 452 aaPredicted RBP9.8□□□□□ -0.84
MCF2L-228ENST00000487354 Q0VG73 95 aa9.8□□□□□ -0.84
MCF2L-228ENST00000487354 SMUG1Q53HV7 270 aa9.8□□□□□ -0.84
MCF2L-228ENST00000487354 C1orf43Q9BWL3 253 aa9.8□□□□□ -0.84
MCF2L-228ENST00000487354 A0A087WX48 190 aa9.79□□□□□ -0.84
MCF2L-228ENST00000487354 UBE2D3P61077 147 aa9.79□□□□□ -0.84
MCF2L-228ENST00000487354 UBE2D2P62837 147 aa9.79□□□□□ -0.84
MCF2L-228ENST00000487354 CIRBPQ14011 172 aaKnown RBP9.79□□□□□ -0.84
MCF2L-228ENST00000487354 KRTAP26-1Q6PEX3 210 aa9.79□□□□□ -0.84
MCF2L-228ENST00000487354 SDIM1Q6ZPB5 146 aa9.79□□□□□ -0.84
MCF2L-228ENST00000487354 PRNTQ86SH4 94 aa9.79□□□□□ -0.84
MCF2L-228ENST00000487354 IL36BQ9NZH7 164 aa9.79□□□□□ -0.84
MCF2L-228ENST00000487354 H3BVH4 76 aa9.78□□□□□ -0.84
MCF2L-228ENST00000487354 ASIPP42127 132 aa9.78□□□□□ -0.84
MCF2L-228ENST00000487354 ELOBQ15370 118 aa9.78□□□□□ -0.84
MCF2L-228ENST00000487354 MPV17L2Q567V2 206 aa9.78□□□□□ -0.84
MCF2L-228ENST00000487354 OR2G3Q8NGZ4 309 aa9.78□□□□□ -0.84
MCF2L-228ENST00000487354 PPP1R1CQ8WVI7 109 aa9.78□□□□□ -0.84
MCF2L-228ENST00000487354 FAM240BA0A1B0GVZ2 78 aa9.77□□□□□ -0.85
MCF2L-228ENST00000487354 RHODO00212 210 aa9.77□□□□□ -0.85
MCF2L-228ENST00000487354 STAG3L2P0CL84 134 aa9.77□□□□□ -0.85
MCF2L-228ENST00000487354 STAG3L3P0CL85 134 aa9.77□□□□□ -0.85
MCF2L-228ENST00000487354 ZFP69Q49AA0 526 aa9.77□□□□□ -0.85
MCF2L-228ENST00000487354 SCGB1C1Q8TD33 95 aa9.77□□□□□ -0.85
MCF2L-228ENST00000487354 A0A087WWL8 130 aa9.76□□□□□ -0.85
MCF2L-228ENST00000487354 A0A1W2PPV4 95 aa9.76□□□□□ -0.85
MCF2L-228ENST00000487354 HLA-DQA1P01909 254 aa9.76□□□□□ -0.85
MCF2L-228ENST00000487354 S100A4P26447 101 aaKnown RBP9.76□□□□□ -0.85
MCF2L-228ENST00000487354 DNLZQ5SXM8 178 aa9.76□□□□□ -0.85
MCF2L-228ENST00000487354 FAM74A4Q5TZK3 123 aa9.76□□□□□ -0.85
MCF2L-228ENST00000487354 DGAT2L7PQ6IED9 249 aa9.76□□□□□ -0.85
MCF2L-228ENST00000487354 C15orf54Q8N8G6 183 aa9.76□□□□□ -0.85
MCF2L-228ENST00000487354 EPDR1Q9UM22 224 aa9.76□□□□□ -0.85
MCF2L-228ENST00000487354 MPC2O95563 127 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms