RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 SPANXA1Q9NS26 97 aa0.15□□□□□ -2.39
GCFC2-209ENST00000486016 NAV2Q8IVL1 2488 aa0.15□□□□□ -2.39
GCFC2-209ENST00000486016 CCDC171Q6TFL3 1326 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 SPAG17Q6Q759 2223 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 BORCS7-ASMTA0A0B4J1R7 106 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 APOC1P02654 83 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 RBP4P02753 201 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 PYYP10082 97 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 CLLU1Q5K131 121 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 MAGOHBQ96A72 148 aaKnown RBP0.14□□□□□ -2.39
GCFC2-209ENST00000486016 TMEM141Q96I45 108 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 DSCR8Q96T75 97 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 VPS25Q9BRG1 176 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 SPANXCQ9NY87 97 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 COA4Q9NYJ1 87 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 NOP16Q9Y3C1 178 aaKnown RBP0.14□□□□□ -2.39
GCFC2-209ENST00000486016 BDP1A6H8Y1 2624 aa0.14□□□□□ -2.39
GCFC2-209ENST00000486016 TRAV2A0A0B4J234 112 aa0.13□□□□□ -2.39
GCFC2-209ENST00000486016 DBIP07108 87 aaKnown RBP0.13□□□□□ -2.39
GCFC2-209ENST00000486016 SLC25A6P12236 298 aa0.13□□□□□ -2.39
GCFC2-209ENST00000486016 ELOF1P60002 83 aaKnown RBP0.13□□□□□ -2.39
GCFC2-209ENST00000486016 EMX2Q04743 252 aa0.13□□□□□ -2.39
GCFC2-209ENST00000486016 DYNLRB2Q8TF09 96 aa0.13□□□□□ -2.39
GCFC2-209ENST00000486016 PROK2Q9HC23 129 aa0.13□□□□□ -2.39
GCFC2-209ENST00000486016 LSM2Q9Y333 95 aaKnown RBP0.13□□□□□ -2.39
GCFC2-209ENST00000486016 UHRF1BP1LA0JNW5 1464 aa0.13□□□□□ -2.39
GCFC2-209ENST00000486016 TANC1Q9C0D5 1861 aa0.13□□□□□ -2.39
GCFC2-209ENST00000486016 ABCA1O95477 2261 aa0.13□□□□□ -2.39
GCFC2-209ENST00000486016 KDM6BO15054 1643 aa0.13□□□□□ -2.39
GCFC2-209ENST00000486016 ANKRD30AQ9BXX3 1397 aa0.12□□□□□ -2.39
GCFC2-209ENST00000486016 TRAV12-2A0A075B6T6 113 aa0.12□□□□□ -2.39
GCFC2-209ENST00000486016 ZNF670-ZNF695F2Z2N8 137 aa0.12□□□□□ -2.39
GCFC2-209ENST00000486016 DR1Q01658 176 aa0.12□□□□□ -2.39
GCFC2-209ENST00000486016 MORN2Q502X0 79 aa0.12□□□□□ -2.39
GCFC2-209ENST00000486016 OR2T2Q6IF00 324 aa0.12□□□□□ -2.39
GCFC2-209ENST00000486016 ATP11AUNQ6ZP68 121 aa0.12□□□□□ -2.39
GCFC2-209ENST00000486016 VMO1Q7Z5L0 202 aa0.12□□□□□ -2.39
GCFC2-209ENST00000486016 PPP1R1CQ8WVI7 109 aa0.12□□□□□ -2.39
GCFC2-209ENST00000486016 BET1LQ9NYM9 111 aa0.12□□□□□ -2.39
GCFC2-209ENST00000486016 ABCA4P78363 2273 aa0.12□□□□□ -2.39
GCFC2-209ENST00000486016 CASZ1Q86V15 1759 aa0.11□□□□□ -2.39
GCFC2-209ENST00000486016 TCRBV3S1A0A5B6 114 aa0.11□□□□□ -2.39
GCFC2-209ENST00000486016 MCRIP1C9JLW8 97 aa0.11□□□□□ -2.39
GCFC2-209ENST00000486016 YPEL1O60688 119 aa0.11□□□□□ -2.39
GCFC2-209ENST00000486016 SCGB1A1P11684 91 aa0.11□□□□□ -2.39
GCFC2-209ENST00000486016 AKAP14Q86UN6 197 aa0.11□□□□□ -2.39
GCFC2-209ENST00000486016 IFI27L1Q96BM0 104 aa0.11□□□□□ -2.39
GCFC2-209ENST00000486016 AIF1LQ9BQI0 150 aa0.11□□□□□ -2.39
GCFC2-209ENST00000486016 SYNJ1O43426 1573 aa0.11□□□□□ -2.39
GCFC2-209ENST00000486016 MAP2P11137 1827 aaKnown RBP0.1□□□□□ -2.39
GCFC2-209ENST00000486016 PTPRMP28827 1452 aa0.1□□□□□ -2.39
GCFC2-209ENST00000486016 PLXNA2O75051 1894 aa0.1□□□□□ -2.39
GCFC2-209ENST00000486016 J3QLW9 94 aa0.1□□□□□ -2.39
GCFC2-209ENST00000486016 M0R2P5 195 aa0.1□□□□□ -2.39
GCFC2-209ENST00000486016 NDUFA11Q86Y39 141 aa0.1□□□□□ -2.39
GCFC2-209ENST00000486016 PYDC1Q8WXC3 89 aa0.1□□□□□ -2.39
GCFC2-209ENST00000486016 FAT4Q6V0I7 4981 aa0.1□□□□□ -2.39
GCFC2-209ENST00000486016 TPRP12270 2363 aaKnown RBP0.1□□□□□ -2.39
GCFC2-209ENST00000486016 F2Z2F3 143 aa0.09□□□□□ -2.4
GCFC2-209ENST00000486016 CYP2G1PQ6ZSU1 146 aa0.09□□□□□ -2.4
GCFC2-209ENST00000486016 PRR15LQ9BU68 103 aa0.09□□□□□ -2.4
GCFC2-209ENST00000486016 ERG28Q9UKR5 140 aa0.09□□□□□ -2.4
GCFC2-209ENST00000486016 ERCC6Q03468 1493 aa0.09□□□□□ -2.4
GCFC2-209ENST00000486016 CACNA1HO95180 2353 aa0.09□□□□□ -2.4
GCFC2-209ENST00000486016 TTC28Q96AY4 2481 aa0.08□□□□□ -2.4
GCFC2-209ENST00000486016 JMJD1CQ15652 2540 aa0.08□□□□□ -2.4
GCFC2-209ENST00000486016 TRBV20-1A0A075B6N2 111 aa0.08□□□□□ -2.4
GCFC2-209ENST00000486016 A0A087WTM6 91 aa0.08□□□□□ -2.4
GCFC2-209ENST00000486016 RBAKDNA6NC62 111 aa0.08□□□□□ -2.4
GCFC2-209ENST00000486016 CCDC179H3BU77 68 aa0.08□□□□□ -2.4
GCFC2-209ENST00000486016 NPC2P61916 151 aa0.08□□□□□ -2.4
GCFC2-209ENST00000486016 NCS1P62166 190 aa0.08□□□□□ -2.4
GCFC2-209ENST00000486016 HIST1H1AQ02539 215 aaPredicted RBP0.08□□□□□ -2.4
GCFC2-209ENST00000486016 MMGT1Q8N4V1 131 aa0.08□□□□□ -2.4
GCFC2-209ENST00000486016 BPESC1Q9GZL8 116 aa0.08□□□□□ -2.4
GCFC2-209ENST00000486016 ZNF142P52746 1687 aaPredicted RBP0.08□□□□□ -2.4
GCFC2-209ENST00000486016 MED13LQ71F56 2210 aa0.07□□□□□ -2.4
GCFC2-209ENST00000486016 SOGA1O94964 1423 aa0.07□□□□□ -2.4
GCFC2-209ENST00000486016 IGLC6P0CF74 106 aa0.07□□□□□ -2.4
GCFC2-209ENST00000486016 CCL3L1P16619 93 aa0.07□□□□□ -2.4
GCFC2-209ENST00000486016 LINC01545Q5VT33 79 aa0.07□□□□□ -2.4
GCFC2-209ENST00000486016 CDK13Q14004 1512 aaKnown RBP0.07□□□□□ -2.4
GCFC2-209ENST00000486016 TNS1Q9HBL0 1735 aaKnown RBP0.07□□□□□ -2.4
GCFC2-209ENST00000486016 ARHGEF10O15013 1369 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 KIF13AQ9H1H9 1805 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 OVOS2A0A0J9YW53 1432 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 OVOS2Q6IE36 1432 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 GVQW2A0A096LPI5 108 aaPredicted RBP0.06□□□□□ -2.4
GCFC2-209ENST00000486016 FAM236AA0A1B0GUQ0 79 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 FAM236BA0A1B0GV22 79 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 M0R129 80 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 ARPC5O15511 151 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 CKS1BP61024 79 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 SSBP1Q04837 148 aaKnown RBP0.06□□□□□ -2.4
GCFC2-209ENST00000486016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 C4orf33Q8N1A6 199 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 C20orf197Q8N268 126 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 NDUFA12Q9UI09 145 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 MAST4O15021 2626 aa0.06□□□□□ -2.4
GCFC2-209ENST00000486016 VIRMAQ69YN4 1812 aaKnown RBP0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms