RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 FAM159AQ6UWV7 190 aa11.46□□□□□ -0.57
DDR1-245ENST00000484556 SMIM3Q9BZL3 60 aa11.46□□□□□ -0.57
DDR1-245ENST00000484556 GNRH2O43555 120 aa11.45□□□□□ -0.58
DDR1-245ENST00000484556 EIF3GO75821 320 aaKnown RBP eCLIP11.45□□□□□ -0.58
DDR1-245ENST00000484556 C14orf177Q52M58 125 aa11.45□□□□□ -0.58
DDR1-245ENST00000484556 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
DDR1-245ENST00000484556 KLK12Q9UKR0 248 aa11.45□□□□□ -0.58
DDR1-245ENST00000484556 TRBV6-4A0A1B0GX49 114 aa11.44□□□□□ -0.58
DDR1-245ENST00000484556 RPL12P30050 165 aaKnown RBP11.44□□□□□ -0.58
DDR1-245ENST00000484556 ZNF266Q14584 549 aa11.44□□□□□ -0.58
DDR1-245ENST00000484556 TRBV7-9A0A0J9YWB2 115 aa11.43□□□□□ -0.58
DDR1-245ENST00000484556 RBAKDNA6NC62 111 aa11.43□□□□□ -0.58
DDR1-245ENST00000484556 UBE2L3P68036 154 aaKnown RBP11.43□□□□□ -0.58
DDR1-245ENST00000484556 WFDC1Q9HC57 220 aa11.43□□□□□ -0.58
DDR1-245ENST00000484556 MBD2Q9UBB5 411 aa11.43□□□□□ -0.58
DDR1-245ENST00000484556 A0A0J9YXV3 536 aa11.42□□□□□ -0.58
DDR1-245ENST00000484556 DIRC3C9JPN6 131 aa11.42□□□□□ -0.58
DDR1-245ENST00000484556 CSN1S1P47710 185 aa11.42□□□□□ -0.58
DDR1-245ENST00000484556 Q6AWC8 147 aa11.42□□□□□ -0.58
DDR1-245ENST00000484556 DPPA3Q6W0C5 159 aa11.42□□□□□ -0.58
DDR1-245ENST00000484556 SCGB1C1Q8TD33 95 aa11.42□□□□□ -0.58
DDR1-245ENST00000484556 GAGE12JA6NER3 117 aa11.41□□□□□ -0.58
DDR1-245ENST00000484556 GAGE1Q13065 139 aa11.41□□□□□ -0.58
DDR1-245ENST00000484556 GAGE4Q13068 117 aa11.41□□□□□ -0.58
DDR1-245ENST00000484556 GAGE5Q13069 117 aa11.41□□□□□ -0.58
DDR1-245ENST00000484556 GAGE13Q4V321 117 aa11.41□□□□□ -0.58
DDR1-245ENST00000484556 KHDC3LQ587J8 217 aa11.41□□□□□ -0.58
DDR1-245ENST00000484556 CFAP126Q5VTH2 177 aa11.41□□□□□ -0.58
DDR1-245ENST00000484556 ZC2HC1AQ96GY0 325 aa11.41□□□□□ -0.58
DDR1-245ENST00000484556 URGCP-MRPS24S4R325 110 aa11.41□□□□□ -0.58
DDR1-245ENST00000484556 KRTAP10-8P60410 259 aa11.4□□□□□ -0.58
DDR1-245ENST00000484556 NIT1Q86X76 327 aa11.4□□□□□ -0.58
DDR1-245ENST00000484556 C9orf163Q8N9P6 203 aa11.4□□□□□ -0.58
DDR1-245ENST00000484556 HYLS1Q96M11 299 aa11.4□□□□□ -0.58
DDR1-245ENST00000484556 PGPA6NDG6 321 aa11.39□□□□□ -0.59
DDR1-245ENST00000484556 USP17L23D6RBM5 183 aa11.39□□□□□ -0.59
DDR1-245ENST00000484556 TYMSP04818 313 aa11.39□□□□□ -0.59
DDR1-245ENST00000484556 PRSS1P07477 247 aa11.39□□□□□ -0.59
DDR1-245ENST00000484556 TAS2R45P59539 299 aa11.39□□□□□ -0.59
DDR1-245ENST00000484556 LENEPQ9Y5L5 61 aa11.39□□□□□ -0.59
DDR1-245ENST00000484556 KIF25-AS1Q9Y6Z4 181 aa11.39□□□□□ -0.59
DDR1-245ENST00000484556 PHOX2AO14813 284 aa11.38□□□□□ -0.59
DDR1-245ENST00000484556 RAB2AP61019 212 aa11.38□□□□□ -0.59
DDR1-245ENST00000484556 ATRAIDQ6UW56 229 aa11.38□□□□□ -0.59
DDR1-245ENST00000484556 ALG5Q9Y673 324 aa11.38□□□□□ -0.59
DDR1-245ENST00000484556 HMGB3O15347 200 aaKnown RBP11.37□□□□□ -0.59
DDR1-245ENST00000484556 LINC00694P0DN24 101 aa11.37□□□□□ -0.59
DDR1-245ENST00000484556 ZNF876PQ49A33 203 aa11.37□□□□□ -0.59
DDR1-245ENST00000484556 WDR73Q6P4I2 378 aa11.37□□□□□ -0.59
DDR1-245ENST00000484556 SDIM1Q6ZPB5 146 aa11.37□□□□□ -0.59
DDR1-245ENST00000484556 TMED6Q8WW62 240 aa11.37□□□□□ -0.59
DDR1-245ENST00000484556 MED28Q9H204 178 aa11.37□□□□□ -0.59
DDR1-245ENST00000484556 SH3BGRL3Q9H299 93 aa11.37□□□□□ -0.59
DDR1-245ENST00000484556 OTORQ9NRC9 128 aa11.37□□□□□ -0.59
DDR1-245ENST00000484556 HLA-DQA1P01909 254 aa11.36□□□□□ -0.59
DDR1-245ENST00000484556 SEC11BP0C7V7 166 aa11.36□□□□□ -0.59
DDR1-245ENST00000484556 RGS21Q2M5E4 152 aa11.36□□□□□ -0.59
DDR1-245ENST00000484556 ASB13Q8WXK3 278 aa11.36□□□□□ -0.59
DDR1-245ENST00000484556 TVP23CQ96ET8 276 aa11.36□□□□□ -0.59
DDR1-245ENST00000484556 C1orf43Q9BWL3 253 aa11.36□□□□□ -0.59
DDR1-245ENST00000484556 Q9UF83 564 aa11.36□□□□□ -0.59
DDR1-245ENST00000484556 A0A1W2PPV4 95 aa11.35□□□□□ -0.59
DDR1-245ENST00000484556 PQLC2Q6ZP29 291 aa11.35□□□□□ -0.59
DDR1-245ENST00000484556 GOLT1AQ6ZVE7 132 aa11.35□□□□□ -0.59
DDR1-245ENST00000484556 CYB561D1Q8N8Q1 229 aa11.35□□□□□ -0.59
DDR1-245ENST00000484556 OR10G9Q8NGN4 311 aa11.35□□□□□ -0.59
DDR1-245ENST00000484556 OR10G7Q8NGN6 311 aa11.35□□□□□ -0.59
DDR1-245ENST00000484556 CMTM2Q8TAZ6 248 aa11.35□□□□□ -0.59
DDR1-245ENST00000484556 CHTF8P0CG12 524 aa11.34□□□□□ -0.59
DDR1-245ENST00000484556 MGST1P10620 155 aaKnown RBP11.34□□□□□ -0.59
DDR1-245ENST00000484556 GNG5P63218 68 aa11.34□□□□□ -0.59
DDR1-245ENST00000484556 CIRBPQ14011 172 aaKnown RBP11.34□□□□□ -0.59
DDR1-245ENST00000484556 DGAT2L7PQ6IED9 249 aa11.34□□□□□ -0.59
DDR1-245ENST00000484556 DPH3Q96FX2 82 aa11.34□□□□□ -0.59
DDR1-245ENST00000484556 A0A087WWC5 75 aa11.33□□□□□ -0.6
DDR1-245ENST00000484556 A0A087WYN8 130 aa11.33□□□□□ -0.6
DDR1-245ENST00000484556 A0A0U1RQV1 116 aa11.33□□□□□ -0.6
DDR1-245ENST00000484556 F6UZH7 168 aa11.33□□□□□ -0.6
DDR1-245ENST00000484556 CIDEAO60543 219 aa11.33□□□□□ -0.6
DDR1-245ENST00000484556 FAM74A1Q5RGS3 127 aa11.33□□□□□ -0.6
DDR1-245ENST00000484556 ARL6IP6Q8N6S5 226 aa11.33□□□□□ -0.6
DDR1-245ENST00000484556 SAMD10Q9BYL1 202 aa11.33□□□□□ -0.6
DDR1-245ENST00000484556 SDF2L1Q9HCN8 221 aa11.33□□□□□ -0.6
DDR1-245ENST00000484556 A0A087WX48 190 aa11.32□□□□□ -0.6
DDR1-245ENST00000484556 ARL14EPLP0DKL9 152 aa11.32□□□□□ -0.6
DDR1-245ENST00000484556 LCE2AQ5TA79 106 aaPredicted RBP11.32□□□□□ -0.6
DDR1-245ENST00000484556 SGK494Q96LW2 274 aa11.32□□□□□ -0.6
DDR1-245ENST00000484556 TREM1Q9NP99 234 aa11.32□□□□□ -0.6
DDR1-245ENST00000484556 STAG3L2P0CL84 134 aa11.31□□□□□ -0.6
DDR1-245ENST00000484556 STAG3L3P0CL85 134 aa11.31□□□□□ -0.6
DDR1-245ENST00000484556 RPL19P84098 196 aaKnown RBP11.31□□□□□ -0.6
DDR1-245ENST00000484556 Q0VG73 95 aa11.31□□□□□ -0.6
DDR1-245ENST00000484556 TRAV21A0A0B4J279 112 aa11.3□□□□□ -0.6
DDR1-245ENST00000484556 GIPP09681 153 aaPredicted RBP11.3□□□□□ -0.6
DDR1-245ENST00000484556 CDC34P49427 236 aaPredicted RBP11.3□□□□□ -0.6
DDR1-245ENST00000484556 PRR3P79522 188 aaKnown RBP11.3□□□□□ -0.6
DDR1-245ENST00000484556 ELOBQ15370 118 aa11.3□□□□□ -0.6
DDR1-245ENST00000484556 Q5BKY6 102 aa11.3□□□□□ -0.6
DDR1-245ENST00000484556 ZNF506Q5JVG8 444 aa11.3□□□□□ -0.6
DDR1-245ENST00000484556 ENHOQ6UWT2 76 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms