RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 VCX2Q9H322 139 aa6.61□□□□□ -1.35
CDC42SE1-204ENST00000483763 GPX1P07203 203 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 ZNF493Q6ZR52 646 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 AMN1Q8IY45 258 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 GATD1Q8NB37 220 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 OR9G4Q8NGQ1 327 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 RAX2Q96IS3 184 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 JMJD8Q96S16 334 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 FAM110AQ9BQ89 295 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 VWFP04275 2813 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 SAP30O75446 220 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 RNASE4P34096 147 aaKnown RBP6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 TWIST1Q15672 202 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 LENEPQ9Y5L5 61 aa6.6□□□□□ -1.35
CDC42SE1-204ENST00000483763 TRAV26-1A0A087WT03 109 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 GAS8-AS1O95177 125 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 IGKV3-20P01619 116 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 RPS20P60866 119 aaKnown RBP6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 ZNF705AQ6ZN79 300 aaPredicted RBP6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 OR10AG1Q8NH19 301 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 KCNS1Q96KK3 526 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 SAMD10Q9BYL1 202 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 CSN3P07498 182 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 PMCHP20382 165 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 ID1P41134 155 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 UBE2V1Q13404 147 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 OCIAD2Q56VL3 154 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 COL5A1-AS1Q5SY13 56 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 APRG1Q8IVJ8 170 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 TMEM61Q8N0U2 210 aa6.59□□□□□ -1.35
CDC42SE1-204ENST00000483763 KLLNB2CW77 178 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 ZNF324O75467 553 aaPredicted RBP6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 SCGB1A1P11684 91 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 AMTP48728 403 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 PMCHL1Q16048 86 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 FAM104BQ5XKR9 115 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 NIT1Q86X76 327 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 BOD1L2Q8IYS8 172 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 ORAOV1Q8WV07 137 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 BORCS7Q96B45 105 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 ZMAT4Q9H898 229 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 A0A0J9YX75 114 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 GNRH2O43555 120 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 RIPPLY3P57055 190 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 SNRPD3P62318 126 aaKnown RBP6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 PAFAH1B2P68402 229 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 ANXA2RQ3ZCQ2 193 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 MRPL51Q4U2R6 128 aaKnown RBP6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 RNASEKQ6P5S7 137 aaKnown RBP6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 C16orf95Q9H693 158 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 PKD1L1Q8TDX9 2849 aa6.58□□□□□ -1.36
CDC42SE1-204ENST00000483763 TRAV12-2A0A075B6T6 113 aa6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 TRAV21A0A0B4J279 112 aa6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 D6R8Y8 96 aa6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 SMKR1H3BMG3 65 aa6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 H3BVH4 76 aa6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 K7ERU9 68 aa6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 M0R2Z0 102 aa6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 EVI2AP22794 236 aa6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 FHL3Q13643 280 aa6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 SAMD13Q5VXD3 122 aa6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 RNF185Q96GF1 192 aa6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 CCL24O00175 119 aa6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 CD300EQ496F6 205 aaPredicted RBP6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 TIMM8BQ9Y5J9 83 aaPredicted RBP6.57□□□□□ -1.36
CDC42SE1-204ENST00000483763 TRRAPQ9Y4A5 3859 aa6.56□□□□□ -1.36
CDC42SE1-204ENST00000483763 TRBV7-9A0A0J9YWB2 115 aa6.56□□□□□ -1.36
CDC42SE1-204ENST00000483763 NCR2O95944 276 aa6.56□□□□□ -1.36
CDC42SE1-204ENST00000483763 DEFB114Q30KQ6 69 aa6.56□□□□□ -1.36
CDC42SE1-204ENST00000483763 TDRG1Q3Y452 100 aa6.56□□□□□ -1.36
CDC42SE1-204ENST00000483763 TMEM191AQ9H0A3 160 aa6.56□□□□□ -1.36
CDC42SE1-204ENST00000483763 PEMTQ9UBM1 199 aa6.56□□□□□ -1.36
CDC42SE1-204ENST00000483763 NBEAL1Q6ZS30 2694 aa6.56□□□□□ -1.36
CDC42SE1-204ENST00000483763 TRAV12-3A0A0B4J271 114 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 KNCNA6PVL3 124 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 SNAI2O43623 268 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 HSBP1O75506 76 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 OR5AL1P0C617 328 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 RNASE3P12724 160 aaKnown RBP6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 PROK1P58294 105 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 SPINK13Q1W4C9 94 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 OR4C5Q8NGB2 326 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 U3KQK5 164 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 NOTCH3Q9UM47 2321 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 ADARB2-AS1A8MUL3 147 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 GATA1P15976 413 aaPredicted RBP6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 DEFB131AP59861 70 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 KRTAP10-3P60369 221 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 AMTNQ6UX39 209 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 Q8N976 141 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 CST9LQ9H4G1 147 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 ZNF256Q9Y2P7 627 aaPredicted RBP6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 MUC4Q99102 2169 aa6.55□□□□□ -1.36
CDC42SE1-204ENST00000483763 IGHV1-24A0A0C4DH33 117 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 LOC389332A0A1B0GUA5 103 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 NDUFA7O95182 113 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 NPYP01303 97 aa6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 IFI27P40305 119 aaPredicted RBP6.54□□□□□ -1.36
CDC42SE1-204ENST00000483763 KRTDAPP60985 99 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms