RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SMIM9A6NGZ8 99 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 KNCNA6PVL3 124 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 C1orf196B1AJZ1 125 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 CIDEAO60543 219 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 INSP01308 110 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 ZNF705DP0CH99 300 aaPredicted RBP5.16□□□□□ -1.58
SHQ1-207ENST00000475558 ZNF705BP0CI00 300 aaPredicted RBP5.16□□□□□ -1.58
SHQ1-207ENST00000475558 RPS10P46783 165 aaKnown RBP5.16□□□□□ -1.58
SHQ1-207ENST00000475558 LINC00322Q6ZN03 302 aaPredicted RBP5.16□□□□□ -1.58
SHQ1-207ENST00000475558 CBLN2Q8IUK8 224 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 SYT8Q8NBV8 401 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 PTH2Q96A98 100 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 YPEL4Q96NS1 127 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 LINC01587Q99440 93 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 NEU1Q99519 415 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 SPXQ9BT56 116 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 CNFNQ9BYD5 112 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 C19orf73Q9NVV2 129 aa5.16□□□□□ -1.58
SHQ1-207ENST00000475558 SORL1Q92673 2214 aa5.15□□□□□ -1.58
SHQ1-207ENST00000475558 LOC102724200A0A096LPH7 203 aaPredicted RBP5.15□□□□□ -1.59
SHQ1-207ENST00000475558 IGKV3D-20A0A0C4DH25 116 aa5.15□□□□□ -1.59
SHQ1-207ENST00000475558 SNAI2O43623 268 aa5.15□□□□□ -1.59
SHQ1-207ENST00000475558 SCO1O75880 301 aa5.15□□□□□ -1.59
SHQ1-207ENST00000475558 PPP1R17O96001 155 aa5.15□□□□□ -1.59
SHQ1-207ENST00000475558 TRGC1P0CF51 173 aa5.15□□□□□ -1.59
SHQ1-207ENST00000475558 IGLC6P0CF74 106 aa5.15□□□□□ -1.59
SHQ1-207ENST00000475558 ZNF80P51504 273 aaPredicted RBP5.15□□□□□ -1.59
SHQ1-207ENST00000475558 RAB5BP61020 215 aa5.15□□□□□ -1.59
SHQ1-207ENST00000475558 HBBP68871 147 aa5.15□□□□□ -1.59
SHQ1-207ENST00000475558 GDF5OSQ5U4N7 250 aa5.15□□□□□ -1.59
SHQ1-207ENST00000475558 TMEM208Q9BTX3 173 aa5.15□□□□□ -1.59
SHQ1-207ENST00000475558 PHLDA3Q9Y5J5 127 aa5.15□□□□□ -1.59
SHQ1-207ENST00000475558 TRAPPC1Q9Y5R8 145 aa5.15□□□□□ -1.59
SHQ1-207ENST00000475558 TGIF2-C20orf24A0A0A6YYL0 155 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 TRAV12-3A0A0B4J271 114 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 IGKV3-20P01619 116 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 PPBPP02775 128 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 CD7P09564 240 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 ARMS2P0C7Q2 107 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 CTRLP40313 264 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 TWIST1Q15672 202 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 ZNF124Q15973 351 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 SPINK13Q1W4C9 94 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 GFI1BQ5VTD9 330 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 LYZL1Q6UWQ5 148 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 GATD1Q8NB37 220 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 GTSF1Q8WW33 167 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 PGLYRP4Q96LB8 373 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 TMEM191AQ9H0A3 160 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 NAGKQ9UJ70 344 aa5.14□□□□□ -1.59
SHQ1-207ENST00000475558 CBY3A6NI87 242 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 M0R2Z0 102 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 APCSP02743 223 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 SMIM17P0DL12 118 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 NTF3P20783 257 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 RAB4BP61018 213 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 LGALS9BQ3B8N2 356 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 SPANXN1Q5VSR9 72 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 Q6ZWC4 215 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 ZFP82Q8N141 532 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 Q8N1Y9 231 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 RCHY1Q96PM5 261 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 SCRT2Q9NQ03 307 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 SELENOKQ9Y6D0 94 aa5.13□□□□□ -1.59
SHQ1-207ENST00000475558 TMSB15BA0A087X1C1 80 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 A0A1B0GXF2 115 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 SNURFLB1AK76 121 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 EREGO14944 169 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 CRXO43186 299 aaPredicted RBP5.12□□□□□ -1.59
SHQ1-207ENST00000475558 CA1P00915 261 aaPredicted RBP5.12□□□□□ -1.59
SHQ1-207ENST00000475558 S100A6P06703 90 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 CAMPP49913 170 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 TCL1AP56279 114 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 ZNF415Q09FC8 603 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 FABP9Q0Z7S8 132 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 RRN3P1Q2M238 152 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 CDPF1Q6NVV7 123 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 DEFB125Q8N687 156 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.12□□□□□ -1.59
SHQ1-207ENST00000475558 TPPP3Q9BW30 176 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 ZMAT4Q9H898 229 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 LAMTOR2Q9Y2Q5 125 aa5.12□□□□□ -1.59
SHQ1-207ENST00000475558 LYSTQ99698 3801 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 TRAV12-2A0A075B6T6 113 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 IGHV3-16A0A0C4DH30 117 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 GRIFINA4D1Z8 144 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 A8MWV9 139 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 M0R2P5 195 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 GNRH2O43555 120 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 TRGC2P03986 189 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 DEFB1P60022 68 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 DAZ2Q13117 558 aaKnown RBP5.11□□□□□ -1.59
SHQ1-207ENST00000475558 TMEM136Q6ZRR5 245 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 SBSPONQ8IVN8 264 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 TMEM263Q8WUH6 116 aaKnown RBP5.11□□□□□ -1.59
SHQ1-207ENST00000475558 C16orf74Q96GX8 76 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 C9orf85Q96MD7 179 aa5.11□□□□□ -1.59
SHQ1-207ENST00000475558 C11orf21Q9P2W6 132 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms