RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SPINK13Q1W4C9 94 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 COA6Q5JTJ3 125 aaKnown RBP4.83□□□□□ -1.64
ATG4A-207ENST00000474825 PRR31Q5SQ13 230 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 MORN3Q6PF18 240 aaPredicted RBP4.83□□□□□ -1.64
ATG4A-207ENST00000474825 STHQ8IWL8 128 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 CSNK1G2-AS1Q8NCQ2 148 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 FRZBQ92765 325 aa4.83□□□□□ -1.64
ATG4A-207ENST00000474825 TRAV12-2A0A075B6T6 113 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 TMSB15BA0A087X1C1 80 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 IGHV3-16A0A0C4DH30 117 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 GRIFINA4D1Z8 144 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 SNURFLB1AK76 121 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 GNRH2O43555 120 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 HIST1H2BKO60814 126 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 IGKV3-20P01619 116 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 HIST1H2BJP06899 126 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 HIST1H2BOP23527 126 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 HIST1H2BBP33778 126 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 ASIPP42127 132 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 HIST1H2BDP58876 126 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 RAB5BP61020 215 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 NUTF2P61970 127 aaKnown RBP4.82□□□□□ -1.64
ATG4A-207ENST00000474825 HIST1H2BCP62807 126 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 CACNG7P62955 275 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 FABP9Q0Z7S8 132 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 HIST2H2BEQ16778 126 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.82□□□□□ -1.64
ATG4A-207ENST00000474825 PIK3CD-AS1Q5SR53 167 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 MRPL54Q6P161 138 aaKnown RBP4.82□□□□□ -1.64
ATG4A-207ENST00000474825 FAM159AQ6UWV7 190 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 C1orf158Q8N1D5 194 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 TMEM256Q8N2U0 113 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 HIST1H2BHQ93079 126 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 C9orf85Q96MD7 179 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 HIST1H2BNQ99877 126 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 HIST1H2BMQ99879 126 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 TMEM191AQ9H0A3 160 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 TRAPPC1Q9Y5R8 145 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 NBEAL1Q6ZS30 2694 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 DNAH9Q9NYC9 4486 aa4.82□□□□□ -1.64
ATG4A-207ENST00000474825 NOTCH3Q9UM47 2321 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 HUWE1Q7Z6Z7 4374 aaKnown RBP4.81□□□□□ -1.64
ATG4A-207ENST00000474825 AGRNO00468 2067 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 PKD1L1Q8TDX9 2849 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 TRGV11A0A075B6L2 103 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 KIR2DL5BA0A0G2JN68 375 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 KIR2DL5BA0A0G2JPC4 375 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 A8MZ25 164 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 J3KRW8 73 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 SPINK4O60575 86 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 INSP01308 110 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 TRGC1P0CF51 173 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 NTF3P20783 257 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 SLAQ13239 276 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 MUC21Q5SSG8 566 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 FAM104BQ5XKR9 115 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 ZNF705AQ6ZN79 300 aaPredicted RBP4.81□□□□□ -1.64
ATG4A-207ENST00000474825 GTSCR1Q86UQ5 136 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 KIR2DL5AQ8N109 375 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 DEFB125Q8N687 156 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 POM121L12Q8N7R1 296 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 OR10AG1Q8NH19 301 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 KIR2DL5BQ8NHK3 375 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 IL17DQ8TAD2 202 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 BORCS7Q96B45 105 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 WFDC10AQ9H1F0 79 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 ZMAT5Q9UDW3 170 aaKnown RBP4.81□□□□□ -1.64
ATG4A-207ENST00000474825 U3KQK5 164 aa4.81□□□□□ -1.64
ATG4A-207ENST00000474825 C5orf52A6NGY3 159 aa4.8□□□□□ -1.64
ATG4A-207ENST00000474825 APCSP02743 223 aa4.8□□□□□ -1.64
ATG4A-207ENST00000474825 CAMPP49913 170 aa4.8□□□□□ -1.64
ATG4A-207ENST00000474825 Q0VG73 95 aa4.8□□□□□ -1.64
ATG4A-207ENST00000474825 C11orf72Q8NBR9 251 aa4.8□□□□□ -1.64
ATG4A-207ENST00000474825 NDUFAF3Q9BU61 184 aa4.8□□□□□ -1.64
ATG4A-207ENST00000474825 C1QTNF4Q9BXJ3 329 aa4.8□□□□□ -1.64
ATG4A-207ENST00000474825 MSRB1Q9NZV6 116 aa4.8□□□□□ -1.64
ATG4A-207ENST00000474825 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
ATG4A-207ENST00000474825 KIF25-AS1Q9Y6Z4 181 aa4.8□□□□□ -1.64
ATG4A-207ENST00000474825 LOC102724200A0A096LPH7 203 aaPredicted RBP4.79□□□□□ -1.64
ATG4A-207ENST00000474825 H3BVH4 76 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 ESDP10768 282 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 HOXA5P20719 270 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 S100A4P26447 101 aaKnown RBP4.79□□□□□ -1.64
ATG4A-207ENST00000474825 FXYD7P58549 80 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 LINC00315P59091 139 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 CTAG1AP78358 180 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 DEFA6Q01524 100 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 TWIST1Q15672 202 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 OR10J3Q5JRS4 329 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 RNASE8Q8TDE3 154 aaKnown RBP4.79□□□□□ -1.64
ATG4A-207ENST00000474825 RNF185Q96GF1 192 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 ALKBH7Q9BT30 221 aaPredicted RBP4.79□□□□□ -1.64
ATG4A-207ENST00000474825 TPPP3Q9BW30 176 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 CSTL1Q9H114 145 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 XCL2Q9UBD3 114 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 NAGKQ9UJ70 344 aa4.79□□□□□ -1.64
ATG4A-207ENST00000474825 PRSS47A8MTI9 375 aa4.78□□□□□ -1.64
ATG4A-207ENST00000474825 UBE2CO00762 179 aa4.78□□□□□ -1.64
ATG4A-207ENST00000474825 SPRY2O43597 315 aa4.78□□□□□ -1.64
ATG4A-207ENST00000474825 PPBPP02775 128 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms