RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 DLC1Q96QB1 1528 aa0.02□□□□□ -2.41
CLK1-209ENST00000472679 SMARCA2P51531 1590 aa0.02□□□□□ -2.41
CLK1-209ENST00000472679 ACACAQ13085 2346 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 IGHV3-30P01768 117 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 IGHV3-30-5P0DP03 117 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 FABP4P15090 132 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 GLRXP35754 106 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 CAV3P56539 151 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 MRPS15P82914 257 aaKnown RBP0.01□□□□□ -2.41
CLK1-209ENST00000472679 CCL4L1Q8NHW4 92 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 PLEKHB2Q96CS7 222 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 SPRR2FQ96RM1 72 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 LPAR5Q9H1C0 372 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 ZNF609O15014 1411 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 PPIP5K1Q6PFW1 1433 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 DNAH17Q9UFH2 4485 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 DNAH11Q96DT5 4516 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 CLASP1Q7Z460 1538 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 LAMC1P11047 1609 aa0.01□□□□□ -2.41
CLK1-209ENST00000472679 VIRMAQ69YN4 1812 aaKnown RBP0.01□□□□□ -2.41
CLK1-209ENST00000472679 A6NN06 94 aa0□□□□□ -2.41
CLK1-209ENST00000472679 SMR3BP02814 79 aaPredicted RBP0□□□□□ -2.41
CLK1-209ENST00000472679 TAS2R41P59536 307 aa0□□□□□ -2.41
CLK1-209ENST00000472679 COL14A1Q05707 1796 aaKnown RBP0□□□□□ -2.41
CLK1-209ENST00000472679 EFCAB6Q5THR3 1501 aa0□□□□□ -2.41
CLK1-209ENST00000472679 C10orf71Q711Q0 1435 aa0□□□□□ -2.41
CLK1-209ENST00000472679 RIMS1Q86UR5 1692 aaKnown RBP0□□□□□ -2.41
CLK1-209ENST00000472679 NEK7Q8TDX7 302 aa0□□□□□ -2.41
CLK1-209ENST00000472679 BORCS8Q96FH0 119 aa0□□□□□ -2.41
CLK1-209ENST00000472679 DOPEY2Q9Y3R5 2298 aa0□□□□□ -2.41
CLK1-209ENST00000472679 LAMC3Q9Y6N6 1575 aa0□□□□□ -2.41
CLK1-209ENST00000472679 KNL1Q8NG31 2342 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 MED13LQ71F56 2210 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 DNAH2Q9P225 4427 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 TET3O43151 1660 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 ADGBQ8N7X0 1667 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 ALKQ9UM73 1620 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.01□□□□□ -2.41
CLK1-209ENST00000472679 CUX1P39880 1505 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 FAM135AQ9P2D6 1515 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 EEA1Q15075 1411 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 KIAA1107Q9UPP5 1409 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 KPNA4O00629 521 aaPredicted RBP-0.01□□□□□ -2.41
CLK1-209ENST00000472679 PIN1P1O15428 100 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 UFC1Q9Y3C8 167 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 DNAH8Q96JB1 4490 aa-0.01□□□□□ -2.41
CLK1-209ENST00000472679 SHROOM2Q13796 1616 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 MAP3K4Q9Y6R4 1608 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 BIVM-ERCC5R4GMW8 1640 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 PLCE1Q9P212 2302 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 AHCTF1Q8WYP5 2266 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 WNK2Q9Y3S1 2297 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 ADGRL2O95490 1459 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 VPS13DQ5THJ4 4388 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 SULT1C4O75897 302 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 MRPS36P82909 103 aaKnown RBP-0.02□□□□□ -2.41
CLK1-209ENST00000472679 RBM3P98179 157 aaKnown RBP-0.02□□□□□ -2.41
CLK1-209ENST00000472679 GLYATL3Q5SZD4 288 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 DIRC1Q969H9 104 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 LRTM1Q9HBL6 345 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 XIRP1Q702N8 1843 aaKnown RBP-0.02□□□□□ -2.41
CLK1-209ENST00000472679 WIZO95785 1651 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 ASXL3Q9C0F0 2248 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 TMEM131LA2VDJ0 1609 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 LRP6O75581 1613 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 SSC5DA1L4H1 1573 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 ADAMTS12P58397 1594 aa-0.02□□□□□ -2.41
CLK1-209ENST00000472679 THOC2Q8NI27 1593 aaKnown RBP-0.02□□□□□ -2.41
CLK1-209ENST00000472679 GOLGA3Q08378 1498 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 MYH3P11055 1940 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 FAM135BQ49AJ0 1406 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 KIF13AQ9H1H9 1805 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 C3orf85A0A1B0GTC6 90 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 H3BQV1 296 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 ASB16-AS1Q495Z4 193 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 XAF1Q6GPH4 301 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 C10orf99Q6UWK7 81 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 TMED4Q7Z7H5 227 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 LYG2Q86SG7 212 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 CROCCP2Q86T23 111 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 C5orf17Q8NAS9 161 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 AP3S1Q92572 193 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 SPRR2GQ9BYE4 73 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 IL20Q9NYY1 176 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 STOML2Q9UJZ1 356 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 DIP2AQ14689 1571 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 CACNA1CQ13936 2221 aa-0.03□□□□□ -2.41
CLK1-209ENST00000472679 KIDINS220Q9ULH0 1771 aa-0.04□□□□□ -2.42
CLK1-209ENST00000472679 EIF3AQ14152 1382 aaKnown RBP-0.04□□□□□ -2.42
CLK1-209ENST00000472679 ANGPTL5Q86XS5 388 aa-0.04□□□□□ -2.42
CLK1-209ENST00000472679 GRPEL2Q8TAA5 225 aa-0.04□□□□□ -2.42
CLK1-209ENST00000472679 MCEEQ96PE7 176 aa-0.04□□□□□ -2.42
CLK1-209ENST00000472679 MED11Q9P086 117 aa-0.04□□□□□ -2.42
CLK1-209ENST00000472679 NRKQ7Z2Y5 1582 aa-0.04□□□□□ -2.42
CLK1-209ENST00000472679 CDK13Q14004 1512 aaKnown RBP-0.04□□□□□ -2.42
CLK1-209ENST00000472679 TULP4Q9NRJ4 1543 aa-0.04□□□□□ -2.42
CLK1-209ENST00000472679 TCOF1Q13428 1488 aaKnown RBP-0.04□□□□□ -2.42
CLK1-209ENST00000472679 WDR7Q9Y4E6 1490 aa-0.04□□□□□ -2.42
CLK1-209ENST00000472679 CHD1O14646 1710 aa-0.04□□□□□ -2.42
CLK1-209ENST00000472679 TJP1Q07157 1748 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms