RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 ZNF575Q86XF7 245 aa6.73□□□□□ -1.33
PTPRE-207ENST00000471218 C11orf21Q9P2W6 132 aa6.73□□□□□ -1.33
PTPRE-207ENST00000471218 SORL1Q92673 2214 aa6.73□□□□□ -1.33
PTPRE-207ENST00000471218 IGHV1OR15-1A0A075B7D0 117 aa6.72□□□□□ -1.33
PTPRE-207ENST00000471218 ARMS2P0C7Q2 107 aa6.72□□□□□ -1.33
PTPRE-207ENST00000471218 ESDP10768 282 aa6.72□□□□□ -1.33
PTPRE-207ENST00000471218 HOXA5P20719 270 aa6.72□□□□□ -1.33
PTPRE-207ENST00000471218 S100A4P26447 101 aaKnown RBP6.72□□□□□ -1.33
PTPRE-207ENST00000471218 RAB4BP61018 213 aa6.72□□□□□ -1.33
PTPRE-207ENST00000471218 ANXA2RQ3ZCQ2 193 aa6.72□□□□□ -1.33
PTPRE-207ENST00000471218 GTSCR1Q86UQ5 136 aa6.72□□□□□ -1.33
PTPRE-207ENST00000471218 ZFP82Q8N141 532 aa6.72□□□□□ -1.33
PTPRE-207ENST00000471218 C19orf73Q9NVV2 129 aa6.72□□□□□ -1.33
PTPRE-207ENST00000471218 LOC102724200A0A096LPH7 203 aaPredicted RBP6.71□□□□□ -1.34
PTPRE-207ENST00000471218 PPP1R17O96001 155 aa6.71□□□□□ -1.34
PTPRE-207ENST00000471218 GZMBP10144 247 aa6.71□□□□□ -1.34
PTPRE-207ENST00000471218 CAMPP49913 170 aa6.71□□□□□ -1.34
PTPRE-207ENST00000471218 FAM104BQ5XKR9 115 aa6.71□□□□□ -1.34
PTPRE-207ENST00000471218 TMSB15BA0A087X1C1 80 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 TRAV12-3A0A0B4J271 114 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 KNCNA6PVL3 124 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 CRXO43186 299 aaPredicted RBP6.7□□□□□ -1.34
PTPRE-207ENST00000471218 NTF3P20783 257 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 DEFB1P60022 68 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 SLAQ13239 276 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 SPINK13Q1W4C9 94 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 SPANXN1Q5VSR9 72 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 DEFB125Q8N687 156 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 SYT8Q8NBV8 401 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 C9orf85Q96MD7 179 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 AP1S3Q96PC3 154 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 RCHY1Q96PM5 261 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 ALKBH7Q9BT30 221 aaPredicted RBP6.7□□□□□ -1.34
PTPRE-207ENST00000471218 SPXQ9BT56 116 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 TPPP3Q9BW30 176 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 PHLDA3Q9Y5J5 127 aa6.7□□□□□ -1.34
PTPRE-207ENST00000471218 IGHV3-16A0A0C4DH30 117 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 KIR2DL5BA0A0G2JN68 375 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 KIR2DL5BA0A0G2JPC4 375 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 LOC105371267A0A1B0GV96 52 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 RBMY1BA6NDE4 496 aaKnown RBP6.69□□□□□ -1.34
PTPRE-207ENST00000471218 RBMY1EA6NEQ0 496 aaKnown RBP6.69□□□□□ -1.34
PTPRE-207ENST00000471218 M0R2Z0 102 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 SPINK4O60575 86 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 RBMY1DP0C7P1 496 aaKnown RBP6.69□□□□□ -1.34
PTPRE-207ENST00000471218 RNASE3P12724 160 aaKnown RBP6.69□□□□□ -1.34
PTPRE-207ENST00000471218 TWIST1Q15672 202 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 KIR2DL5AQ8N109 375 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 ORMDL3Q8N138 153 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 KIR2DL5BQ8NHK3 375 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 MRAP2Q96G30 205 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 GSN-AS1Q9NRJ2 163 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 NAGKQ9UJ70 344 aa6.69□□□□□ -1.34
PTPRE-207ENST00000471218 LCE6AA0A183 80 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 GRIFINA4D1Z8 144 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 H3BVH4 76 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 M0R381 172 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 CD7P09564 240 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 PMCHP20382 165 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 SRIP30626 198 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 SNRPEP62304 92 aaKnown RBP6.68□□□□□ -1.34
PTPRE-207ENST00000471218 ZNF415Q09FC8 603 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 Q8N1Y9 231 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 POM121L12Q8N7R1 296 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 OR10AG1Q8NH19 301 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 IL17DQ8TAD2 202 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 CHCHD1Q96BP2 118 aaKnown RBP6.68□□□□□ -1.34
PTPRE-207ENST00000471218 GOLT1BQ9Y3E0 138 aa6.68□□□□□ -1.34
PTPRE-207ENST00000471218 FRMD6-AS1P0C7T7 363 aa6.67□□□□□ -1.34
PTPRE-207ENST00000471218 RAB4AP20338 218 aa6.67□□□□□ -1.34
PTPRE-207ENST00000471218 S100A2P29034 98 aa6.67□□□□□ -1.34
PTPRE-207ENST00000471218 NDUFA6P56556 154 aa6.67□□□□□ -1.34
PTPRE-207ENST00000471218 MUC21Q5SSG8 566 aa6.67□□□□□ -1.34
PTPRE-207ENST00000471218 BAGE3Q86Y29 109 aa6.67□□□□□ -1.34
PTPRE-207ENST00000471218 HIST3H2BBQ8N257 126 aa6.67□□□□□ -1.34
PTPRE-207ENST00000471218 C18orf32Q8TCD1 76 aa6.67□□□□□ -1.34
PTPRE-207ENST00000471218 TMEM18Q96B42 140 aa6.67□□□□□ -1.34
PTPRE-207ENST00000471218 DPH3P1Q9H4G8 78 aa6.67□□□□□ -1.34
PTPRE-207ENST00000471218 EDA2RQ9HAV5 297 aa6.67□□□□□ -1.34
PTPRE-207ENST00000471218 SELENOKQ9Y6D0 94 aa6.67□□□□□ -1.34
PTPRE-207ENST00000471218 TENM2Q9NT68 2774 aa6.66□□□□□ -1.34
PTPRE-207ENST00000471218 TRAV12-2A0A075B6T6 113 aa6.66□□□□□ -1.34
PTPRE-207ENST00000471218 CBY3A6NI87 242 aa6.66□□□□□ -1.34
PTPRE-207ENST00000471218 PRSS47A8MTI9 375 aa6.66□□□□□ -1.34
PTPRE-207ENST00000471218 J3KRW8 73 aa6.66□□□□□ -1.34
PTPRE-207ENST00000471218 K7EMI3 77 aa6.66□□□□□ -1.34
PTPRE-207ENST00000471218 CIDEAO60543 219 aa6.66□□□□□ -1.34
PTPRE-207ENST00000471218 IGKV3-20P01619 116 aa6.66□□□□□ -1.34
PTPRE-207ENST00000471218 PRB4P10163 310 aaPredicted RBP6.66□□□□□ -1.34
PTPRE-207ENST00000471218 RPL32P62910 135 aaKnown RBP6.66□□□□□ -1.34
PTPRE-207ENST00000471218 KIR3DS1Q14943 382 aa6.66□□□□□ -1.34
PTPRE-207ENST00000471218 SBSPONQ8IVN8 264 aa6.66□□□□□ -1.34
PTPRE-207ENST00000471218 DNAH7Q8WXX0 4024 aa6.66□□□□□ -1.34
PTPRE-207ENST00000471218 SMIM9A6NGZ8 99 aa6.65□□□□□ -1.34
PTPRE-207ENST00000471218 A8MWV9 139 aa6.65□□□□□ -1.34
PTPRE-207ENST00000471218 A8MZ25 164 aa6.65□□□□□ -1.34
PTPRE-207ENST00000471218 M0R2P5 195 aa6.65□□□□□ -1.34
PTPRE-207ENST00000471218 RHODO00212 210 aa6.65□□□□□ -1.34
PTPRE-207ENST00000471218 SMIM17P0DL12 118 aa6.65□□□□□ -1.34
PTPRE-207ENST00000471218 CKS2P33552 79 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms