RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 S100A4P26447 101 aaKnown RBP9.24□□□□□ -0.93
TRAF4-208ENST00000469529 HBBP68871 147 aa9.24□□□□□ -0.93
TRAF4-208ENST00000469529 BORCS7Q96B45 105 aa9.24□□□□□ -0.93
TRAF4-208ENST00000469529 NAGKQ9UJ70 344 aa9.24□□□□□ -0.93
TRAF4-208ENST00000469529 DNAH3Q8TD57 4116 aa9.23□□□□□ -0.93
TRAF4-208ENST00000469529 CBY3A6NI87 242 aa9.23□□□□□ -0.93
TRAF4-208ENST00000469529 NTF3P20783 257 aa9.23□□□□□ -0.93
TRAF4-208ENST00000469529 C11orf72Q8NBR9 251 aa9.23□□□□□ -0.93
TRAF4-208ENST00000469529 TMEM208Q9BTX3 173 aa9.23□□□□□ -0.93
TRAF4-208ENST00000469529 MDFICQ9P1T7 246 aa9.23□□□□□ -0.93
TRAF4-208ENST00000469529 TP53TG1Q9Y2A0 90 aa9.23□□□□□ -0.93
TRAF4-208ENST00000469529 PHOX2AO14813 284 aa9.22□□□□□ -0.93
TRAF4-208ENST00000469529 SPRY2O43597 315 aa9.22□□□□□ -0.93
TRAF4-208ENST00000469529 HLA-DQA1P01909 254 aa9.22□□□□□ -0.93
TRAF4-208ENST00000469529 PRB2P02812 416 aaPredicted RBP9.22□□□□□ -0.93
TRAF4-208ENST00000469529 DMRTA1Q5VZB9 504 aa9.22□□□□□ -0.93
TRAF4-208ENST00000469529 TMEM136Q6ZRR5 245 aa9.22□□□□□ -0.93
TRAF4-208ENST00000469529 RNASE8Q8TDE3 154 aaKnown RBP9.22□□□□□ -0.93
TRAF4-208ENST00000469529 TMEM263Q8WUH6 116 aaKnown RBP9.22□□□□□ -0.93
TRAF4-208ENST00000469529 TMEM191AQ9H0A3 160 aa9.22□□□□□ -0.93
TRAF4-208ENST00000469529 PHLDA3Q9Y5J5 127 aa9.22□□□□□ -0.93
TRAF4-208ENST00000469529 H3BVH4 76 aa9.21□□□□□ -0.94
TRAF4-208ENST00000469529 RPS10P46783 165 aaKnown RBP9.21□□□□□ -0.94
TRAF4-208ENST00000469529 ZNF415Q09FC8 603 aa9.21□□□□□ -0.94
TRAF4-208ENST00000469529 DAZ2Q13117 558 aaKnown RBP9.21□□□□□ -0.94
TRAF4-208ENST00000469529 MRPL54Q6P161 138 aaKnown RBP9.21□□□□□ -0.94
TRAF4-208ENST00000469529 ZFP82Q8N141 532 aa9.21□□□□□ -0.94
TRAF4-208ENST00000469529 OR10AG1Q8NH19 301 aa9.21□□□□□ -0.94
TRAF4-208ENST00000469529 IL17DQ8TAD2 202 aa9.21□□□□□ -0.94
TRAF4-208ENST00000469529 FRZBQ92765 325 aa9.21□□□□□ -0.94
TRAF4-208ENST00000469529 RNF183Q96D59 192 aa9.21□□□□□ -0.94
TRAF4-208ENST00000469529 OVOL2Q9BRP0 275 aa9.21□□□□□ -0.94
TRAF4-208ENST00000469529 FRMD6-AS1P0C7T7 363 aa9.2□□□□□ -0.94
TRAF4-208ENST00000469529 AZU1P20160 251 aa9.2□□□□□ -0.94
TRAF4-208ENST00000469529 TWIST1Q15672 202 aa9.2□□□□□ -0.94
TRAF4-208ENST00000469529 RRN3P1Q2M238 152 aa9.2□□□□□ -0.94
TRAF4-208ENST00000469529 LGALS9BQ3B8N2 356 aa9.2□□□□□ -0.94
TRAF4-208ENST00000469529 SPANXN1Q5VSR9 72 aa9.2□□□□□ -0.94
TRAF4-208ENST00000469529 RASL10AQ92737 203 aa9.2□□□□□ -0.94
TRAF4-208ENST00000469529 C16orf74Q96GX8 76 aa9.2□□□□□ -0.94
TRAF4-208ENST00000469529 X6R8D5 127 aa9.2□□□□□ -0.94
TRAF4-208ENST00000469529 TGP01266 2768 aa9.19□□□□□ -0.94
TRAF4-208ENST00000469529 M0R2P5 195 aa9.19□□□□□ -0.94
TRAF4-208ENST00000469529 SPINK4O60575 86 aa9.19□□□□□ -0.94
TRAF4-208ENST00000469529 TRGC1P0CF51 173 aa9.19□□□□□ -0.94
TRAF4-208ENST00000469529 CAMPP49913 170 aa9.19□□□□□ -0.94
TRAF4-208ENST00000469529 POM121L12Q8N7R1 296 aa9.19□□□□□ -0.94
TRAF4-208ENST00000469529 SYT8Q8NBV8 401 aa9.19□□□□□ -0.94
TRAF4-208ENST00000469529 TPPP3Q9BW30 176 aa9.19□□□□□ -0.94
TRAF4-208ENST00000469529 GSN-AS1Q9NRJ2 163 aa9.19□□□□□ -0.94
TRAF4-208ENST00000469529 TRAPPC1Q9Y5R8 145 aa9.19□□□□□ -0.94
TRAF4-208ENST00000469529 PLAC8L1A1L4L8 177 aa9.18□□□□□ -0.94
TRAF4-208ENST00000469529 SNURFLB1AK76 121 aa9.18□□□□□ -0.94
TRAF4-208ENST00000469529 FAM104BQ5XKR9 115 aa9.18□□□□□ -0.94
TRAF4-208ENST00000469529 SMIM15Q7Z3B0 74 aa9.18□□□□□ -0.94
TRAF4-208ENST00000469529 MRAPQ8TCY5 172 aa9.18□□□□□ -0.94
TRAF4-208ENST00000469529 RCHY1Q96PM5 261 aa9.18□□□□□ -0.94
TRAF4-208ENST00000469529 MSRB1Q9NZV6 116 aa9.18□□□□□ -0.94
TRAF4-208ENST00000469529 K7EIL1 84 aa9.17□□□□□ -0.94
TRAF4-208ENST00000469529 CIDEAO60543 219 aa9.17□□□□□ -0.94
TRAF4-208ENST00000469529 TRGC2P03986 189 aa9.17□□□□□ -0.94
TRAF4-208ENST00000469529 MIFP14174 115 aa9.17□□□□□ -0.94
TRAF4-208ENST00000469529 C18orf15Q96N68 181 aa9.17□□□□□ -0.94
TRAF4-208ENST00000469529 KIF25-AS1Q9Y6Z4 181 aa9.17□□□□□ -0.94
TRAF4-208ENST00000469529 IGHV3OR16-12A0A075B7B8 117 aa9.16□□□□□ -0.94
TRAF4-208ENST00000469529 A8MWV9 139 aa9.16□□□□□ -0.94
TRAF4-208ENST00000469529 C1orf196B1AJZ1 125 aa9.16□□□□□ -0.94
TRAF4-208ENST00000469529 APCSP02743 223 aa9.16□□□□□ -0.94
TRAF4-208ENST00000469529 PRM2P04554 102 aa9.16□□□□□ -0.94
TRAF4-208ENST00000469529 HTN1P15515 57 aa9.16□□□□□ -0.94
TRAF4-208ENST00000469529 LINC00315P59091 139 aa9.16□□□□□ -0.94
TRAF4-208ENST00000469529 FABP9Q0Z7S8 132 aa9.16□□□□□ -0.94
TRAF4-208ENST00000469529 ZNF876PQ49A33 203 aa9.16□□□□□ -0.94
TRAF4-208ENST00000469529 LINC00612Q8N6U2 182 aa9.16□□□□□ -0.94
TRAF4-208ENST00000469529 MRPL18Q9H0U6 180 aaKnown RBP9.16□□□□□ -0.94
TRAF4-208ENST00000469529 TIMM8BQ9Y5J9 83 aaPredicted RBP9.16□□□□□ -0.94
TRAF4-208ENST00000469529 U3KQK5 164 aa9.16□□□□□ -0.94
TRAF4-208ENST00000469529 MUC21A0A0G2JKD1 596 aa9.15□□□□□ -0.94
TRAF4-208ENST00000469529 MUC21A0A140T8X8 626 aa9.15□□□□□ -0.94
TRAF4-208ENST00000469529 M0R381 172 aa9.15□□□□□ -0.94
TRAF4-208ENST00000469529 PPBPP02775 128 aa9.15□□□□□ -0.94
TRAF4-208ENST00000469529 CRYGDP07320 174 aa9.15□□□□□ -0.94
TRAF4-208ENST00000469529 RAB4AP20338 218 aa9.15□□□□□ -0.94
TRAF4-208ENST00000469529 EVI2AP22794 236 aa9.15□□□□□ -0.94
TRAF4-208ENST00000469529 RAB4BP61018 213 aa9.15□□□□□ -0.94
TRAF4-208ENST00000469529 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.15□□□□□ -0.94
TRAF4-208ENST00000469529 OR11H2Q8NH07 326 aa9.15□□□□□ -0.94
TRAF4-208ENST00000469529 AP1S3Q96PC3 154 aa9.15□□□□□ -0.94
TRAF4-208ENST00000469529 PRKDCP78527 4128 aaKnown RBP9.15□□□□□ -0.94
TRAF4-208ENST00000469529 SLAQ13239 276 aa9.14□□□□□ -0.95
TRAF4-208ENST00000469529 DEFB135Q30KP9 77 aa9.14□□□□□ -0.95
TRAF4-208ENST00000469529 UFSP1Q6NVU6 142 aa9.14□□□□□ -0.95
TRAF4-208ENST00000469529 ZFP2Q6ZN57 461 aa9.14□□□□□ -0.95
TRAF4-208ENST00000469529 RNF185Q96GF1 192 aa9.14□□□□□ -0.95
TRAF4-208ENST00000469529 DPH3P1Q9H4G8 78 aa9.14□□□□□ -0.95
TRAF4-208ENST00000469529 EDA2RQ9HAV5 297 aa9.14□□□□□ -0.95
TRAF4-208ENST00000469529 LYRM9A8MSI8 78 aa9.13□□□□□ -0.95
TRAF4-208ENST00000469529 RS1O15537 224 aa9.13□□□□□ -0.95
TRAF4-208ENST00000469529 RAB5BP61020 215 aa9.13□□□□□ -0.95
TRAF4-208ENST00000469529 Q8NAQ8 132 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms