RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 V9GYV3 84 aa6.21□□□□□ -1.42
BRCA1-208ENST00000468300 CSN3P07498 182 aa6.21□□□□□ -1.42
BRCA1-208ENST00000468300 CRIP1P50238 77 aa6.21□□□□□ -1.42
BRCA1-208ENST00000468300 PAM16Q9Y3D7 125 aa6.21□□□□□ -1.42
BRCA1-208ENST00000468300 LOC107984640A0A0U1RRK4 108 aa6.2□□□□□ -1.42
BRCA1-208ENST00000468300 COX8CQ7Z4L0 72 aa6.2□□□□□ -1.42
BRCA1-208ENST00000468300 F8P00451 2351 aa6.2□□□□□ -1.42
BRCA1-208ENST00000468300 C19orf71A6NCJ1 209 aa6.2□□□□□ -1.42
BRCA1-208ENST00000468300 HAX1O00165 279 aa6.2□□□□□ -1.42
BRCA1-208ENST00000468300 DEFB1P60022 68 aa6.2□□□□□ -1.42
BRCA1-208ENST00000468300 RASL11AQ6T310 242 aa6.2□□□□□ -1.42
BRCA1-208ENST00000468300 BAGE2Q86Y30 109 aa6.2□□□□□ -1.42
BRCA1-208ENST00000468300 SLC50A1Q9BRV3 221 aa6.2□□□□□ -1.42
BRCA1-208ENST00000468300 NRN1Q9NPD7 142 aa6.2□□□□□ -1.42
BRCA1-208ENST00000468300 VWFP04275 2813 aa6.2□□□□□ -1.42
BRCA1-208ENST00000468300 TRRAPQ9Y4A5 3859 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 A0A1W2PS18 150 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 ERCC8Q13216 396 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 TMEM183AQ8IXX5 376 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 ZC2HC1AQ96GY0 325 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 C8orf49Q96NF6 230 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 AAMDCQ9H7C9 122 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 SMIM17P0DL12 118 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 CMTM2Q8TAZ6 248 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 PYGO2Q9BRQ0 406 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 CA1P00915 261 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-208ENST00000468300 TRGC1P0CF51 173 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 FAM231DQ6ZW35 169 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 PRNTQ86SH4 94 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 MS4A6AQ9H2W1 248 aa6.19□□□□□ -1.42
BRCA1-208ENST00000468300 RBAKDNA6NC62 111 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 CCL24O00175 119 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 UBE2G1P62253 170 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 C1orf195Q5TG92 126 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 Q6ZN92 141 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-208ENST00000468300 Q8TAT8 98 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 TMEM18Q96B42 140 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 C7orf71A4D174 169 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 NPIPB6E9PJ23 425 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 TRGC2P03986 189 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 ZNF80P51504 273 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-208ENST00000468300 FAM19A4Q96LR4 140 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 VAMP8Q9BV40 100 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 AGPAT4-IT1Q9H0P7 198 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 OSTCQ9NRP0 149 aa6.18□□□□□ -1.42
BRCA1-208ENST00000468300 K7EQG2 157 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 SPINK8P0C7L1 97 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 C9orf47Q6ZRZ4 202 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 LINC00336Q6ZUF6 198 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 OR10G8Q8NGN5 311 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 C16orf92Q96LL3 132 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 PRR25Q96S07 402 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 PRO0628Q9UI54 55 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 IGKV3-7A0A075B6H7 116 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 H3BS24 57 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 H7BYZ3 331 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 MGST1P10620 155 aaKnown RBP6.17□□□□□ -1.42
BRCA1-208ENST00000468300 SPATA3Q8NHX4 192 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 IMMP2LQ96T52 175 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 C2CD3Q4AC94 2353 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 F6UB75 175 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 FRMD6-AS1P0C7T7 363 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 IBA57Q5T440 356 aaKnown RBP6.17□□□□□ -1.42
BRCA1-208ENST00000468300 Q6ZQT7 251 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 ZNF492Q9P255 531 aa6.17□□□□□ -1.42
BRCA1-208ENST00000468300 TRBV24-1A0A075B6N3 115 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 SMIM27A0A1W2PRY6 76 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 DEFB114Q30KQ6 69 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 TMEM97Q5BJF2 176 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 GDF5OSQ5U4N7 250 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 TMEM126AQ9H061 195 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 IZUMO1RA6ND01 250 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 CCDC179H3BU77 68 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 SPRY2O43597 315 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 CT45A10P0DMU9 189 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 CSN1S1P47710 185 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 PRR9Q5T870 116 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 HRCT1Q6UXD1 115 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 IL36BQ9NZH7 164 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 FAM236DA0A1B0GTK5 79 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 FAM236CP0DP71 79 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 RPL11P62913 178 aaKnown RBP6.16□□□□□ -1.42
BRCA1-208ENST00000468300 NDUFA11Q86Y39 141 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 SETD2Q9BYW2 2564 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-208ENST00000468300 EDA2RQ9HAV5 297 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 SIGLEC8Q9NYZ4 499 aa6.16□□□□□ -1.42
BRCA1-208ENST00000468300 C9JAW5 83 aa6.15□□□□□ -1.42
BRCA1-208ENST00000468300 J3KT08 172 aa6.15□□□□□ -1.42
BRCA1-208ENST00000468300 PRIMA1Q86XR5 153 aa6.15□□□□□ -1.42
BRCA1-208ENST00000468300 TMEM61Q8N0U2 210 aa6.15□□□□□ -1.42
BRCA1-208ENST00000468300 GTSF1Q8WW33 167 aa6.15□□□□□ -1.42
BRCA1-208ENST00000468300 NAT8BQ9UHF3 227 aa6.15□□□□□ -1.42
BRCA1-208ENST00000468300 ZNF256Q9Y2P7 627 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-208ENST00000468300 NSUN5P1Q3KNT7 163 aa6.15□□□□□ -1.43
BRCA1-208ENST00000468300 A0A087WWL8 130 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 ATP5LO75964 103 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 LINC00694P0DN24 101 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 FRZBQ92765 325 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 SPANXA1Q9NS26 97 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms