RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SLC25A26Q70HW3 274 aa-0.05□□□□□ -2.42
LRCH3-211ENST00000466054 PRR15LQ9BU68 103 aa-0.05□□□□□ -2.42
LRCH3-211ENST00000466054 NDUFAF1Q9Y375 327 aa-0.05□□□□□ -2.42
LRCH3-211ENST00000466054 HSPB11Q9Y547 144 aa-0.05□□□□□ -2.42
LRCH3-211ENST00000466054 ABCA12Q86UK0 2595 aa-0.05□□□□□ -2.42
LRCH3-211ENST00000466054 PAEPP09466 180 aa-0.06□□□□□ -2.42
LRCH3-211ENST00000466054 SELENOSQ9BQE4 189 aa-0.06□□□□□ -2.42
LRCH3-211ENST00000466054 CALML5Q9NZT1 146 aa-0.06□□□□□ -2.42
LRCH3-211ENST00000466054 GINS2Q9Y248 185 aa-0.06□□□□□ -2.42
LRCH3-211ENST00000466054 MACF1Q9UPN3 7388 aaKnown RBP-0.06□□□□□ -2.42
LRCH3-211ENST00000466054 NCOR2Q9Y618 2525 aa-0.07□□□□□ -2.42
LRCH3-211ENST00000466054 HRNRQ86YZ3 2850 aaPredicted RBP-0.07□□□□□ -2.42
LRCH3-211ENST00000466054 CCDC171Q6TFL3 1326 aa-0.07□□□□□ -2.42
LRCH3-211ENST00000466054 TRAV36DV7A0A075B6V5 113 aa-0.07□□□□□ -2.42
LRCH3-211ENST00000466054 A0A1B0GX51 115 aa-0.07□□□□□ -2.42
LRCH3-211ENST00000466054 MAGOHBQ96A72 148 aaKnown RBP-0.07□□□□□ -2.42
LRCH3-211ENST00000466054 JMJD1CQ15652 2540 aa-0.07□□□□□ -2.42
LRCH3-211ENST00000466054 IGF2RP11717 2491 aa-0.07□□□□□ -2.42
LRCH3-211ENST00000466054 KDM5CP41229 1560 aa-0.07□□□□□ -2.42
LRCH3-211ENST00000466054 TNS1Q9HBL0 1735 aaKnown RBP-0.07□□□□□ -2.42
LRCH3-211ENST00000466054 UHRF1BP1LA0JNW5 1464 aa-0.08□□□□□ -2.42
LRCH3-211ENST00000466054 F2Z2F3 143 aa-0.08□□□□□ -2.42
LRCH3-211ENST00000466054 SMIM24O75264 130 aa-0.08□□□□□ -2.42
LRCH3-211ENST00000466054 SCTP09683 121 aa-0.08□□□□□ -2.42
LRCH3-211ENST00000466054 EMX2Q04743 252 aa-0.08□□□□□ -2.42
LRCH3-211ENST00000466054 NDUFA11Q86Y39 141 aa-0.08□□□□□ -2.42
LRCH3-211ENST00000466054 SPANXCQ9NY87 97 aa-0.08□□□□□ -2.42
LRCH3-211ENST00000466054 ZNF142P52746 1687 aaPredicted RBP-0.08□□□□□ -2.42
LRCH3-211ENST00000466054 IGSF10Q6WRI0 2623 aa-0.09□□□□□ -2.42
LRCH3-211ENST00000466054 LAMC3Q9Y6N6 1575 aa-0.09□□□□□ -2.42
LRCH3-211ENST00000466054 SOGA1O94964 1423 aa-0.09□□□□□ -2.42
LRCH3-211ENST00000466054 ABCA4P78363 2273 aa-0.09□□□□□ -2.42
LRCH3-211ENST00000466054 ZNF670-ZNF695F2Z2N8 137 aa-0.09□□□□□ -2.42
LRCH3-211ENST00000466054 HLA-DRB4P13762 266 aa-0.09□□□□□ -2.42
LRCH3-211ENST00000466054 ELOF1P60002 83 aaKnown RBP-0.09□□□□□ -2.42
LRCH3-211ENST00000466054 DNAJC15Q9Y5T4 150 aa-0.09□□□□□ -2.42
LRCH3-211ENST00000466054 HLA-DRB4X5D2U9 266 aa-0.09□□□□□ -2.42
LRCH3-211ENST00000466054 CDK13Q14004 1512 aaKnown RBP-0.09□□□□□ -2.42
LRCH3-211ENST00000466054 OTOGQ6ZRI0 2925 aa-0.1□□□□□ -2.42
LRCH3-211ENST00000466054 PIEZO1Q92508 2521 aa-0.1□□□□□ -2.42
LRCH3-211ENST00000466054 UNC13BO14795 1591 aa-0.1□□□□□ -2.42
LRCH3-211ENST00000466054 A0A1B0GW64 132 aa-0.1□□□□□ -2.43
LRCH3-211ENST00000466054 YPEL1O60688 119 aa-0.1□□□□□ -2.43
LRCH3-211ENST00000466054 MT-ND4LP03901 98 aa-0.1□□□□□ -2.43
LRCH3-211ENST00000466054 OR8B8Q15620 311 aa-0.1□□□□□ -2.43
LRCH3-211ENST00000466054 ATP6V0E2Q8NHE4 81 aa-0.1□□□□□ -2.43
LRCH3-211ENST00000466054 BPESC1Q9GZL8 116 aa-0.1□□□□□ -2.43
LRCH3-211ENST00000466054 SPANXA1Q9NS26 97 aa-0.1□□□□□ -2.43
LRCH3-211ENST00000466054 ARAP1Q96P48 1450 aa-0.1□□□□□ -2.43
LRCH3-211ENST00000466054 DEGS1O15121 323 aa-0.11□□□□□ -2.43
LRCH3-211ENST00000466054 RBP4P02753 201 aa-0.11□□□□□ -2.43
LRCH3-211ENST00000466054 NBEAP1P0C6P0 100 aa-0.11□□□□□ -2.43
LRCH3-211ENST00000466054 TMEM244Q5VVB8 128 aa-0.11□□□□□ -2.43
LRCH3-211ENST00000466054 OR2T2Q6IF00 324 aa-0.11□□□□□ -2.43
LRCH3-211ENST00000466054 DYNLRB2Q8TF09 96 aa-0.11□□□□□ -2.43
LRCH3-211ENST00000466054 BANF2Q9H503 90 aa-0.11□□□□□ -2.43
LRCH3-211ENST00000466054 CASZ1Q86V15 1759 aa-0.11□□□□□ -2.43
LRCH3-211ENST00000466054 RBAKDNA6NC62 111 aa-0.12□□□□□ -2.43
LRCH3-211ENST00000466054 TNFSF15O95150 251 aa-0.12□□□□□ -2.43
LRCH3-211ENST00000466054 SNX29P2Q8IUI4 249 aa-0.12□□□□□ -2.43
LRCH3-211ENST00000466054 TCTE3Q8IZS6 198 aa-0.12□□□□□ -2.43
LRCH3-211ENST00000466054 NOP16Q9Y3C1 178 aaKnown RBP-0.12□□□□□ -2.43
LRCH3-211ENST00000466054 MED13LQ71F56 2210 aa-0.12□□□□□ -2.43
LRCH3-211ENST00000466054 VIRMAQ69YN4 1812 aaKnown RBP-0.13□□□□□ -2.43
LRCH3-211ENST00000466054 DMBT1Q9UGM3 2413 aaPredicted RBP-0.13□□□□□ -2.43
LRCH3-211ENST00000466054 BORCS7-ASMTA0A0B4J1R7 106 aa-0.13□□□□□ -2.43
LRCH3-211ENST00000466054 GNG14A0A1W2PPG7 69 aa-0.13□□□□□ -2.43
LRCH3-211ENST00000466054 TCRBV3S1A0A5B6 114 aa-0.13□□□□□ -2.43
LRCH3-211ENST00000466054 ERG28Q9UKR5 140 aa-0.13□□□□□ -2.43
LRCH3-211ENST00000466054 MYO7AQ13402 2215 aa-0.13□□□□□ -2.43
LRCH3-211ENST00000466054 MUC12Q9UKN1 5478 aa-0.14□□□□□ -2.43
LRCH3-211ENST00000466054 TFF1P04155 84 aa-0.14□□□□□ -2.43
LRCH3-211ENST00000466054 SLC25A6P12236 298 aa-0.14□□□□□ -2.43
LRCH3-211ENST00000466054 COX6A2Q02221 97 aa-0.14□□□□□ -2.43
LRCH3-211ENST00000466054 ATP11AUNQ6ZP68 121 aa-0.14□□□□□ -2.43
LRCH3-211ENST00000466054 HIGD1AQ9Y241 93 aa-0.14□□□□□ -2.43
LRCH3-211ENST00000466054 CACNA1CQ13936 2221 aa-0.14□□□□□ -2.43
LRCH3-211ENST00000466054 COL7A1Q02388 2944 aa-0.14□□□□□ -2.43
LRCH3-211ENST00000466054 KIF13AQ9H1H9 1805 aa-0.15□□□□□ -2.43
LRCH3-211ENST00000466054 POLQO75417 2590 aa-0.15□□□□□ -2.43
LRCH3-211ENST00000466054 PLXNA1Q9UIW2 1896 aa-0.15□□□□□ -2.43
LRCH3-211ENST00000466054 H0YJX3 145 aa-0.15□□□□□ -2.43
LRCH3-211ENST00000466054 CCDC179H3BU77 68 aa-0.15□□□□□ -2.43
LRCH3-211ENST00000466054 CMPK1P30085 196 aa-0.15□□□□□ -2.43
LRCH3-211ENST00000466054 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.15□□□□□ -2.43
LRCH3-211ENST00000466054 CYP2G1PQ6ZSU1 146 aa-0.15□□□□□ -2.43
LRCH3-211ENST00000466054 GVQW2A0A096LPI5 108 aaPredicted RBP-0.16□□□□□ -2.44
LRCH3-211ENST00000466054 CCDC153Q494R4 210 aa-0.16□□□□□ -2.44
LRCH3-211ENST00000466054 FAM213BQ8TBF2 198 aa-0.16□□□□□ -2.44
LRCH3-211ENST00000466054 SMIM11BQ8TCY0 68 aa-0.16□□□□□ -2.44
LRCH3-211ENST00000466054 F5P12259 2224 aa-0.16□□□□□ -2.44
LRCH3-211ENST00000466054 J3QLW9 94 aa-0.17□□□□□ -2.44
LRCH3-211ENST00000466054 DBIP07108 87 aaKnown RBP-0.17□□□□□ -2.44
LRCH3-211ENST00000466054 COX4I1P13073 169 aa-0.17□□□□□ -2.44
LRCH3-211ENST00000466054 CCL3L1P16619 93 aa-0.17□□□□□ -2.44
LRCH3-211ENST00000466054 SSBP1Q04837 148 aaKnown RBP-0.17□□□□□ -2.44
LRCH3-211ENST00000466054 CLLU1Q5K131 121 aa-0.17□□□□□ -2.44
LRCH3-211ENST00000466054 IFI27L1Q96BM0 104 aa-0.17□□□□□ -2.44
LRCH3-211ENST00000466054 ASXL3Q9C0F0 2248 aa-0.17□□□□□ -2.44
LRCH3-211ENST00000466054 PTPRMP28827 1452 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms