RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 TMEM88Q6PEY1 159 aa9.65□□□□□ -0.86
ATF3-208ENST00000465155 KCNIP4Q6PIL6 250 aa9.65□□□□□ -0.86
ATF3-208ENST00000465155 LYZL1Q6UWQ5 148 aa9.65□□□□□ -0.86
ATF3-208ENST00000465155 CBLN2Q8IUK8 224 aa9.65□□□□□ -0.86
ATF3-208ENST00000465155 NUP35Q8NFH5 326 aa9.65□□□□□ -0.86
ATF3-208ENST00000465155 IMMP2LQ96T52 175 aa9.65□□□□□ -0.86
ATF3-208ENST00000465155 TM2D3Q9BRN9 247 aa9.65□□□□□ -0.86
ATF3-208ENST00000465155 NBEAL2Q6ZNJ1 2754 aa9.65□□□□□ -0.87
ATF3-208ENST00000465155 CXorf65A6NEN9 183 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 SNURFLB1AK76 121 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 SNAI2O43623 268 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 OR5AL1P0C617 328 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 MED14OSP0DP75 135 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 MIFP14174 115 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 S100PP25815 95 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 SSTP61278 116 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 ZNF493Q6ZR52 646 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.64□□□□□ -0.87
ATF3-208ENST00000465155 C9orf85Q96MD7 179 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 SPATA25Q9BR10 227 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 SSBP4Q9BWG4 385 aaPredicted RBP9.64□□□□□ -0.87
ATF3-208ENST00000465155 PHLDA3Q9Y5J5 127 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 MUC4Q99102 2169 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 PLAC8L1A1L4L8 177 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 F2Z2F3 143 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 SPINK4O60575 86 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 CTRLP40313 264 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 EMP1P54849 157 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 OR10AG1Q8NH19 301 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 B9D2Q9BPU9 175 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 SCRT2Q9NQ03 307 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 SMCO4Q9NRQ5 59 aa9.64□□□□□ -0.87
ATF3-208ENST00000465155 IGHV4-28A0A0C4DH34 117 aa9.63□□□□□ -0.87
ATF3-208ENST00000465155 DEFB4AO15263 64 aa9.63□□□□□ -0.87
ATF3-208ENST00000465155 SPANXN1Q5VSR9 72 aa9.63□□□□□ -0.87
ATF3-208ENST00000465155 Q8NAQ8 132 aa9.63□□□□□ -0.87
ATF3-208ENST00000465155 IL17DQ8TAD2 202 aa9.62□□□□□ -0.87
ATF3-208ENST00000465155 BORCS7Q96B45 105 aa9.62□□□□□ -0.87
ATF3-208ENST00000465155 SPXQ9BT56 116 aa9.62□□□□□ -0.87
ATF3-208ENST00000465155 NOP10Q9NPE3 64 aaKnown RBP9.62□□□□□ -0.87
ATF3-208ENST00000465155 A0A1B0GUT8 65 aa9.61□□□□□ -0.87
ATF3-208ENST00000465155 M0R381 172 aa9.61□□□□□ -0.87
ATF3-208ENST00000465155 NTF3P20783 257 aa9.61□□□□□ -0.87
ATF3-208ENST00000465155 ELOBQ15370 118 aa9.61□□□□□ -0.87
ATF3-208ENST00000465155 MRPL54Q6P161 138 aaKnown RBP9.61□□□□□ -0.87
ATF3-208ENST00000465155 BTF3L4Q96K17 158 aa9.61□□□□□ -0.87
ATF3-208ENST00000465155 ZMAT4Q9H898 229 aa9.61□□□□□ -0.87
ATF3-208ENST00000465155 M0R2P5 195 aa9.6□□□□□ -0.87
ATF3-208ENST00000465155 CACNG7P62955 275 aa9.6□□□□□ -0.87
ATF3-208ENST00000465155 DAZ2Q13117 558 aaKnown RBP9.6□□□□□ -0.87
ATF3-208ENST00000465155 ZNF876PQ49A33 203 aa9.6□□□□□ -0.87
ATF3-208ENST00000465155 ZFP82Q8N141 532 aa9.6□□□□□ -0.87
ATF3-208ENST00000465155 CNFNQ9BYD5 112 aa9.6□□□□□ -0.87
ATF3-208ENST00000465155 MRPL16Q9NX20 251 aaKnown RBP9.6□□□□□ -0.87
ATF3-208ENST00000465155 MEGF8Q7Z7M0 2845 aa9.6□□□□□ -0.87
ATF3-208ENST00000465155 TRAV9-1A0A075B6T8 112 aa9.6□□□□□ -0.87
ATF3-208ENST00000465155 TGIF2-C20orf24A0A0A6YYL0 155 aa9.6□□□□□ -0.87
ATF3-208ENST00000465155 TWIST1Q15672 202 aa9.6□□□□□ -0.87
ATF3-208ENST00000465155 MSRB1Q9NZV6 116 aa9.6□□□□□ -0.87
ATF3-208ENST00000465155 IGHV4-4A0A075B6R2 117 aa9.59□□□□□ -0.87
ATF3-208ENST00000465155 TRGV1A0A0A0MS02 117 aa9.59□□□□□ -0.87
ATF3-208ENST00000465155 RIGQ13278 110 aa9.59□□□□□ -0.87
ATF3-208ENST00000465155 WDR73Q6P4I2 378 aa9.59□□□□□ -0.87
ATF3-208ENST00000465155 Q6ZTI0 123 aa9.59□□□□□ -0.87
ATF3-208ENST00000465155 SYT8Q8NBV8 401 aa9.59□□□□□ -0.87
ATF3-208ENST00000465155 YPEL4Q96NS1 127 aa9.59□□□□□ -0.87
ATF3-208ENST00000465155 NXPH4O95158 308 aa9.58□□□□□ -0.88
ATF3-208ENST00000465155 CAMPP49913 170 aa9.58□□□□□ -0.88
ATF3-208ENST00000465155 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
ATF3-208ENST00000465155 ATP5L2Q7Z4Y8 100 aa9.58□□□□□ -0.88
ATF3-208ENST00000465155 TRBV24-1A0A075B6N3 115 aa9.57□□□□□ -0.88
ATF3-208ENST00000465155 HBBP68871 147 aa9.57□□□□□ -0.88
ATF3-208ENST00000465155 LGALS9BQ3B8N2 356 aa9.57□□□□□ -0.88
ATF3-208ENST00000465155 FAM222AQ5U5X8 452 aa9.57□□□□□ -0.88
ATF3-208ENST00000465155 RASL10AQ92737 203 aa9.57□□□□□ -0.88
ATF3-208ENST00000465155 PTH2Q96A98 100 aa9.57□□□□□ -0.88
ATF3-208ENST00000465155 A0A1B0GXF2 115 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 GAGE12BA1L429 117 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 GAGE7O76087 117 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 GAGE12FP0CL80 117 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 GAGE12GP0CL81 117 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 GAGE12IP0CL82 117 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 C11orf68Q9H3H3 251 aaKnown RBP9.56□□□□□ -0.88
ATF3-208ENST00000465155 JPT2Q9H910 190 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 DKK2Q9UBU2 259 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 CELA1Q9UNI1 258 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 A0A0J9YWU9 116 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 A0A1B0GW15 77 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 LYRM9A8MSI8 78 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 AP1S3Q96PC3 154 aa9.56□□□□□ -0.88
ATF3-208ENST00000465155 TRGV2A0A075B6R0 118 aa9.55□□□□□ -0.88
ATF3-208ENST00000465155 TRGC1P0CF51 173 aa9.55□□□□□ -0.88
ATF3-208ENST00000465155 NHLRC4P0CG21 123 aaPredicted RBP9.55□□□□□ -0.88
ATF3-208ENST00000465155 DEFB130BP0DP73 79 aa9.55□□□□□ -0.88
ATF3-208ENST00000465155 DEFB130AP0DP74 79 aa9.55□□□□□ -0.88
ATF3-208ENST00000465155 EVI2AP22794 236 aa9.55□□□□□ -0.88
ATF3-208ENST00000465155 PIK3CD-AS1Q5SR53 167 aa9.55□□□□□ -0.88
ATF3-208ENST00000465155 C14orf178Q8N769 122 aaPredicted RBP9.55□□□□□ -0.88
ATF3-208ENST00000465155 FAM210BQ96KR6 192 aa9.55□□□□□ -0.88
ATF3-208ENST00000465155 TENM3Q9P273 2699 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms