RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TCRBV4S1A1TA0A5B7 111 aa2.01□□□□□ -2.09
ITGB1-208ENST00000464001 GYPBP06028 91 aa2.01□□□□□ -2.09
ITGB1-208ENST00000464001 PIRTP0C851 137 aa2.01□□□□□ -2.09
ITGB1-208ENST00000464001 UBA52P62987 128 aaKnown RBP2.01□□□□□ -2.09
ITGB1-208ENST00000464001 MIR22HGQ0VDD5 57 aa2.01□□□□□ -2.09
ITGB1-208ENST00000464001 S100A7L2Q5SY68 101 aa2.01□□□□□ -2.09
ITGB1-208ENST00000464001 Q8N8P6 123 aa2.01□□□□□ -2.09
ITGB1-208ENST00000464001 TSKUQ8WUA8 353 aa2.01□□□□□ -2.09
ITGB1-208ENST00000464001 TIMM21Q9BVV7 248 aa2.01□□□□□ -2.09
ITGB1-208ENST00000464001 PTPRMP28827 1452 aa2.01□□□□□ -2.09
ITGB1-208ENST00000464001 CCDC18Q5T9S5 1454 aa2.01□□□□□ -2.09
ITGB1-208ENST00000464001 COL4A2P08572 1712 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 TRAV14DV4A0A0A6YYC5 116 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 A0A0G2JQZ4 141 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 TMEM262E9PQX1 116 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 SNCGO76070 127 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 NDUFB6O95139 128 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 CXCL8P10145 99 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 TPRXLQ17RH7 258 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 Q6ZTI0 123 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 CMTM2Q8TAZ6 248 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 DYNLRB2Q8TF09 96 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 V9GYS6 101 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 COL5A1P20908 1838 aaPredicted RBP2□□□□□ -2.09
ITGB1-208ENST00000464001 ARHGAP35Q9NRY4 1499 aa2□□□□□ -2.09
ITGB1-208ENST00000464001 TNS1Q9HBL0 1735 aaKnown RBP2□□□□□ -2.09
ITGB1-208ENST00000464001 PSME4Q14997 1843 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 MYOFQ9NZM1 2061 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 A0A1W2PNN7 141 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 TCRBV3S1A0A5B6 114 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 MT-ATP8P03928 68 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 KRTAP13-2Q52LG2 175 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 ZNF833PQ6ZTB9 187 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 SPACA4Q8TDM5 124 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 AQP10Q96PS8 301 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 PRO1933Q9H354 126 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 NDUFA12Q9UI09 145 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 SCP2D1Q9UJQ7 156 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 PPLO60437 1756 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 CUL9Q8IWT3 2517 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 FYCO1Q9BQS8 1478 aa1.99□□□□□ -2.09
ITGB1-208ENST00000464001 ZFHX2Q9C0A1 2572 aaPredicted RBP1.99□□□□□ -2.09
ITGB1-208ENST00000464001 LRRIQ1Q96JM4 1722 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 TRAV17A0A0B4J275 112 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 RBAKDNA6NC62 111 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 FAM24AA6NFZ4 105 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 TFF1P04155 84 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 IGKV4-1P06312 121 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 RBM3P98179 157 aaKnown RBP1.98□□□□□ -2.09
ITGB1-208ENST00000464001 KRTAP26-1Q6PEX3 210 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 ZGRF1Q86YA3 2104 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 VAMP8Q9BV40 100 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 TEX14Q8IWB6 1497 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 NSD3Q9BZ95 1437 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 KIF20BQ96Q89 1820 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 CR1P17927 2039 aa1.98□□□□□ -2.09
ITGB1-208ENST00000464001 FBN1P35555 2871 aaKnown RBP1.97□□□□□ -2.09
ITGB1-208ENST00000464001 DISP1Q96F81 1524 aa1.97□□□□□ -2.09
ITGB1-208ENST00000464001 MYO18AQ92614 2054 aaKnown RBP1.97□□□□□ -2.09
ITGB1-208ENST00000464001 ARFGEF1Q9Y6D6 1849 aa1.97□□□□□ -2.09
ITGB1-208ENST00000464001 PIPP12273 146 aaPredicted RBP1.97□□□□□ -2.09
ITGB1-208ENST00000464001 PYY3Q5JQD4 70 aa1.97□□□□□ -2.09
ITGB1-208ENST00000464001 SPANXN1Q5VSR9 72 aa1.97□□□□□ -2.09
ITGB1-208ENST00000464001 DPY30Q9C005 99 aa1.97□□□□□ -2.09
ITGB1-208ENST00000464001 DPH3P1Q9H4G8 78 aa1.97□□□□□ -2.09
ITGB1-208ENST00000464001 LINC00312Q9Y6C7 94 aa1.97□□□□□ -2.09
ITGB1-208ENST00000464001 EXPH5Q8NEV8 1989 aa1.97□□□□□ -2.09
ITGB1-208ENST00000464001 CPSF1Q10570 1443 aaKnown RBP1.97□□□□□ -2.09
ITGB1-208ENST00000464001 CASKIN1Q8WXD9 1431 aa1.97□□□□□ -2.09
ITGB1-208ENST00000464001 ESPL1Q14674 2120 aa1.97□□□□□ -2.09
ITGB1-208ENST00000464001 MYH4Q9Y623 1939 aa1.97□□□□□ -2.09
ITGB1-208ENST00000464001 SNCAP37840 140 aa1.96□□□□□ -2.1
ITGB1-208ENST00000464001 PDE6HQ13956 83 aa1.96□□□□□ -2.1
ITGB1-208ENST00000464001 C12orf73Q69YU5 71 aa1.96□□□□□ -2.1
ITGB1-208ENST00000464001 C2orf82Q6UX34 121 aa1.96□□□□□ -2.1
ITGB1-208ENST00000464001 SBSPONQ8IVN8 264 aa1.96□□□□□ -2.1
ITGB1-208ENST00000464001 TMEM106BQ9NUM4 274 aa1.96□□□□□ -2.1
ITGB1-208ENST00000464001 ABCC5O15440 1437 aa1.96□□□□□ -2.1
ITGB1-208ENST00000464001 LAMC3Q9Y6N6 1575 aa1.96□□□□□ -2.1
ITGB1-208ENST00000464001 SHROOM3Q8TF72 1996 aa1.96□□□□□ -2.1
ITGB1-208ENST00000464001 GAPVD1Q14C86 1478 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 PLEKHH2Q8IVE3 1493 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 BRWD1Q9NSI6 2320 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 C10orf71Q711Q0 1435 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 SDHAF1A6NFY7 115 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 IGLV6-57P01721 117 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 IGKCP01834 107 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 SLC25A6P12236 298 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 IL7P13232 177 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 COX7CP15954 63 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 UBE2G1P62253 170 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 ELOBQ15370 118 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 C1orf137Q5JT78 98 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.95□□□□□ -2.1
ITGB1-208ENST00000464001 C5orf38Q86SI9 138 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 TMEM141Q96I45 108 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 AP4S1Q9Y587 144 aa1.95□□□□□ -2.1
ITGB1-208ENST00000464001 ZNF142P52746 1687 aaPredicted RBP1.95□□□□□ -2.1
ITGB1-208ENST00000464001 BAZ2BQ9UIF8 2168 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms