RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 SNAI2O43623 268 aa10.48□□□□□ -0.73
SHANK2-210ENST00000449116 FOXA3P55318 350 aaPredicted RBP10.48□□□□□ -0.73
SHANK2-210ENST00000449116 GTSF1Q8WW33 167 aa10.48□□□□□ -0.73
SHANK2-210ENST00000449116 RPS10P5Q9NQ39 176 aa10.48□□□□□ -0.73
SHANK2-210ENST00000449116 PHLDA3Q9Y5J5 127 aa10.48□□□□□ -0.73
SHANK2-210ENST00000449116 A0A087WWC5 75 aa10.47□□□□□ -0.73
SHANK2-210ENST00000449116 SMIM27A0A1W2PRY6 76 aa10.47□□□□□ -0.73
SHANK2-210ENST00000449116 LYRM9A8MSI8 78 aa10.47□□□□□ -0.73
SHANK2-210ENST00000449116 HIGD1CA8MV81 97 aa10.47□□□□□ -0.73
SHANK2-210ENST00000449116 F2Z2F3 143 aa10.47□□□□□ -0.73
SHANK2-210ENST00000449116 M0R2P5 195 aa10.47□□□□□ -0.73
SHANK2-210ENST00000449116 SPINK4O60575 86 aa10.47□□□□□ -0.73
SHANK2-210ENST00000449116 LGALS9BQ3B8N2 356 aa10.47□□□□□ -0.73
SHANK2-210ENST00000449116 DKK2Q9UBU2 259 aa10.47□□□□□ -0.73
SHANK2-210ENST00000449116 TRGV1A0A0A0MS02 117 aa10.46□□□□□ -0.73
SHANK2-210ENST00000449116 TEX48A0A1B0GUV7 120 aa10.46□□□□□ -0.73
SHANK2-210ENST00000449116 ATP6V1G1O75348 118 aa10.46□□□□□ -0.73
SHANK2-210ENST00000449116 CTRLP40313 264 aa10.46□□□□□ -0.73
SHANK2-210ENST00000449116 FAM222AQ5U5X8 452 aa10.46□□□□□ -0.73
SHANK2-210ENST00000449116 LYZL1Q6UWQ5 148 aa10.46□□□□□ -0.73
SHANK2-210ENST00000449116 OR10AG1Q8NH19 301 aa10.46□□□□□ -0.73
SHANK2-210ENST00000449116 PTH2Q96A98 100 aa10.46□□□□□ -0.73
SHANK2-210ENST00000449116 TMEM242Q9NWH2 141 aa10.46□□□□□ -0.73
SHANK2-210ENST00000449116 NAT8BQ9UHF3 227 aa10.46□□□□□ -0.73
SHANK2-210ENST00000449116 U3KQK5 164 aa10.46□□□□□ -0.73
SHANK2-210ENST00000449116 TENM3Q9P273 2699 aa10.46□□□□□ -0.74
SHANK2-210ENST00000449116 SPART-AS1P0CW21 52 aa10.45□□□□□ -0.74
SHANK2-210ENST00000449116 CACNG7P62955 275 aa10.45□□□□□ -0.74
SHANK2-210ENST00000449116 ZFP82Q8N141 532 aa10.45□□□□□ -0.74
SHANK2-210ENST00000449116 SYT8Q8NBV8 401 aa10.45□□□□□ -0.74
SHANK2-210ENST00000449116 RASL10AQ92737 203 aa10.45□□□□□ -0.74
SHANK2-210ENST00000449116 PGLYRP4Q96LB8 373 aa10.45□□□□□ -0.74
SHANK2-210ENST00000449116 IMMP2LQ96T52 175 aa10.45□□□□□ -0.74
SHANK2-210ENST00000449116 MRPL16Q9NX20 251 aaKnown RBP10.45□□□□□ -0.74
SHANK2-210ENST00000449116 CELA1Q9UNI1 258 aa10.45□□□□□ -0.74
SHANK2-210ENST00000449116 CXorf65A6NEN9 183 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 M0R381 172 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 S100A1P23297 94 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 ZNF876PQ49A33 203 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 PIK3CD-AS1Q5SR53 167 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 SPANXN1Q5VSR9 72 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 DMRTA1Q5VZB9 504 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 WDR73Q6P4I2 378 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 Q6ZTI0 123 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 LINC00612Q8N6U2 182 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 NUP35Q8NFH5 326 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 NDUFAF3Q9BU61 184 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 CNFNQ9BYD5 112 aa10.44□□□□□ -0.74
SHANK2-210ENST00000449116 IGHV4-4A0A075B6R2 117 aa10.43□□□□□ -0.74
SHANK2-210ENST00000449116 MUC21A0A0G2JKD1 596 aa10.43□□□□□ -0.74
SHANK2-210ENST00000449116 MUC21A0A140T8X8 626 aa10.43□□□□□ -0.74
SHANK2-210ENST00000449116 GAGE12BA1L429 117 aa10.43□□□□□ -0.74
SHANK2-210ENST00000449116 GAGE7O76087 117 aa10.43□□□□□ -0.74
SHANK2-210ENST00000449116 NXPH4O95158 308 aa10.43□□□□□ -0.74
SHANK2-210ENST00000449116 GAGE12FP0CL80 117 aa10.43□□□□□ -0.74
SHANK2-210ENST00000449116 GAGE12GP0CL81 117 aa10.43□□□□□ -0.74
SHANK2-210ENST00000449116 GAGE12IP0CL82 117 aa10.43□□□□□ -0.74
SHANK2-210ENST00000449116 ATRAIDQ6UW56 229 aa10.43□□□□□ -0.74
SHANK2-210ENST00000449116 BORCS7Q96B45 105 aa10.43□□□□□ -0.74
SHANK2-210ENST00000449116 DEFB130BP0DP73 79 aa10.42□□□□□ -0.74
SHANK2-210ENST00000449116 DEFB130AP0DP74 79 aa10.42□□□□□ -0.74
SHANK2-210ENST00000449116 FAM3BP58499 235 aaPredicted RBP10.42□□□□□ -0.74
SHANK2-210ENST00000449116 SSTP61278 116 aa10.42□□□□□ -0.74
SHANK2-210ENST00000449116 KCNIP4Q6PIL6 250 aa10.42□□□□□ -0.74
SHANK2-210ENST00000449116 C11orf45Q8TAV5 145 aa10.42□□□□□ -0.74
SHANK2-210ENST00000449116 EDA2RQ9HAV5 297 aa10.42□□□□□ -0.74
SHANK2-210ENST00000449116 MUC4Q99102 2169 aa10.42□□□□□ -0.74
SHANK2-210ENST00000449116 TRGV2A0A075B6R0 118 aa10.41□□□□□ -0.74
SHANK2-210ENST00000449116 A0A1B0GUT8 65 aa10.41□□□□□ -0.74
SHANK2-210ENST00000449116 NTF3P20783 257 aa10.41□□□□□ -0.74
SHANK2-210ENST00000449116 S100PP25815 95 aa10.41□□□□□ -0.74
SHANK2-210ENST00000449116 DAD1P61803 113 aa10.41□□□□□ -0.74
SHANK2-210ENST00000449116 C18orf15Q96N68 181 aa10.41□□□□□ -0.74
SHANK2-210ENST00000449116 A8MWV9 139 aa10.4□□□□□ -0.74
SHANK2-210ENST00000449116 RIGQ13278 110 aa10.4□□□□□ -0.74
SHANK2-210ENST00000449116 TWIST1Q15672 202 aa10.4□□□□□ -0.74
SHANK2-210ENST00000449116 C12orf74Q32Q52 190 aa10.4□□□□□ -0.74
SHANK2-210ENST00000449116 TRAV9-1A0A075B6T8 112 aa10.39□□□□□ -0.75
SHANK2-210ENST00000449116 RS1O15537 224 aa10.39□□□□□ -0.75
SHANK2-210ENST00000449116 BTF3L4Q96K17 158 aa10.39□□□□□ -0.75
SHANK2-210ENST00000449116 AP1S3Q96PC3 154 aa10.39□□□□□ -0.75
SHANK2-210ENST00000449116 MSRB1Q9NZV6 116 aa10.39□□□□□ -0.75
SHANK2-210ENST00000449116 URGCP-MRPS24S4R325 110 aa10.39□□□□□ -0.75
SHANK2-210ENST00000449116 TRAV4A0A0B4J268 109 aa10.38□□□□□ -0.75
SHANK2-210ENST00000449116 TRGC1P0CF51 173 aa10.38□□□□□ -0.75
SHANK2-210ENST00000449116 NANOS2P60321 138 aaKnown RBP10.38□□□□□ -0.75
SHANK2-210ENST00000449116 CFAP126Q5VTH2 177 aa10.38□□□□□ -0.75
SHANK2-210ENST00000449116 MRPL54Q6P161 138 aaKnown RBP10.38□□□□□ -0.75
SHANK2-210ENST00000449116 ATP5L2Q7Z4Y8 100 aa10.38□□□□□ -0.75
SHANK2-210ENST00000449116 OR4C5Q8NGB2 326 aa10.38□□□□□ -0.75
SHANK2-210ENST00000449116 JPT2Q9H910 190 aa10.38□□□□□ -0.75
SHANK2-210ENST00000449116 COL7A1Q02388 2944 aa10.38□□□□□ -0.75
SHANK2-210ENST00000449116 STAB2Q8WWQ8 2551 aa10.37□□□□□ -0.75
SHANK2-210ENST00000449116 A0A1B0GW15 77 aa10.37□□□□□ -0.75
SHANK2-210ENST00000449116 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
SHANK2-210ENST00000449116 SMCO4Q9NRQ5 59 aa10.37□□□□□ -0.75
SHANK2-210ENST00000449116 A0A1B0GXF2 115 aa10.36□□□□□ -0.75
SHANK2-210ENST00000449116 CIDEAO60543 219 aa10.36□□□□□ -0.75
SHANK2-210ENST00000449116 IGHV3-53P01767 116 aa10.36□□□□□ -0.75
SHANK2-210ENST00000449116 ATP5G1P05496 136 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms