RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PRADC1Q9BSG0 188 aa14.39□□□□□ -0.11
SDCBP-204ENST00000447182 IGHV4OR15-8A0A075B7B6 117 aa14.38□□□□□ -0.11
SDCBP-204ENST00000447182 A0A087WW49 117 aa14.38□□□□□ -0.11
SDCBP-204ENST00000447182 IGHV1-69DA0A0B4J2H0 117 aa14.38□□□□□ -0.11
SDCBP-204ENST00000447182 LINC01549A6NIU2 74 aa14.38□□□□□ -0.11
SDCBP-204ENST00000447182 J3QR89 54 aa14.38□□□□□ -0.11
SDCBP-204ENST00000447182 GNRH2O43555 120 aa14.38□□□□□ -0.11
SDCBP-204ENST00000447182 IGHV1-69P01742 117 aa14.38□□□□□ -0.11
SDCBP-204ENST00000447182 DEFB1P60022 68 aa14.38□□□□□ -0.11
SDCBP-204ENST00000447182 COX6B1P14854 86 aa14.38□□□□□ -0.11
SDCBP-204ENST00000447182 PRO0461Q9UI25 63 aa14.38□□□□□ -0.11
SDCBP-204ENST00000447182 CYSLTR1Q9Y271 337 aa14.38□□□□□ -0.11
SDCBP-204ENST00000447182 GAGE13Q4V321 117 aa14.37□□□□□ -0.11
SDCBP-204ENST00000447182 MORN3Q6PF18 240 aaPredicted RBP14.37□□□□□ -0.11
SDCBP-204ENST00000447182 KIF25-AS1Q9Y6Z4 181 aa14.37□□□□□ -0.11
SDCBP-204ENST00000447182 HOXA3O43365 443 aaPredicted RBP14.36□□□□□ -0.11
SDCBP-204ENST00000447182 LINC00315P59091 139 aa14.36□□□□□ -0.11
SDCBP-204ENST00000447182 IGHG2P01859 326 aa14.36□□□□□ -0.11
SDCBP-204ENST00000447182 TMEM238LA0A1B0GVL6 79 aa14.35□□□□□ -0.11
SDCBP-204ENST00000447182 A6NJY4 79 aa14.35□□□□□ -0.11
SDCBP-204ENST00000447182 ZNF815PA8K554 130 aa14.35□□□□□ -0.11
SDCBP-204ENST00000447182 F6UB75 175 aa14.35□□□□□ -0.11
SDCBP-204ENST00000447182 CRYGDP07320 174 aa14.35□□□□□ -0.11
SDCBP-204ENST00000447182 CD300EQ496F6 205 aaPredicted RBP14.35□□□□□ -0.11
SDCBP-204ENST00000447182 AMTNQ6UX39 209 aa14.35□□□□□ -0.11
SDCBP-204ENST00000447182 ATRXP46100 2492 aa14.35□□□□□ -0.11
SDCBP-204ENST00000447182 IGHV3OR16-10A0A075B7F0 116 aa14.35□□□□□ -0.11
SDCBP-204ENST00000447182 SCGB1A1P11684 91 aa14.35□□□□□ -0.11
SDCBP-204ENST00000447182 SCGB2A2Q13296 93 aa14.35□□□□□ -0.11
SDCBP-204ENST00000447182 PAPPA-AS1Q5QFB9 102 aa14.35□□□□□ -0.11
SDCBP-204ENST00000447182 MUC4Q99102 2169 aa14.34□□□□□ -0.11
SDCBP-204ENST00000447182 KLLNB2CW77 178 aa14.34□□□□□ -0.11
SDCBP-204ENST00000447182 RPL11P62913 178 aaKnown RBP14.34□□□□□ -0.11
SDCBP-204ENST00000447182 DUSP14O95147 198 aaKnown RBP14.33□□□□□ -0.11
SDCBP-204ENST00000447182 POLR2KP53803 58 aaKnown RBP14.33□□□□□ -0.11
SDCBP-204ENST00000447182 ETDBQ3ZM63 59 aa14.33□□□□□ -0.11
SDCBP-204ENST00000447182 SAMD13Q5VXD3 122 aa14.33□□□□□ -0.11
SDCBP-204ENST00000447182 SIGMAR1Q99720 223 aa14.33□□□□□ -0.11
SDCBP-204ENST00000447182 RHPN1-AS1Q9BWJ2 59 aa14.33□□□□□ -0.11
SDCBP-204ENST00000447182 HIVEP3Q5T1R4 2406 aa14.33□□□□□ -0.12
SDCBP-204ENST00000447182 IGIPA6NJ69 53 aa14.33□□□□□ -0.12
SDCBP-204ENST00000447182 TSHBP01222 138 aa14.33□□□□□ -0.12
SDCBP-204ENST00000447182 UBE2D1P51668 147 aa14.33□□□□□ -0.12
SDCBP-204ENST00000447182 BRD3OSQ6XYD6 125 aa14.33□□□□□ -0.12
SDCBP-204ENST00000447182 IGF2RP11717 2491 aa14.32□□□□□ -0.12
SDCBP-204ENST00000447182 IGLV4-69A0A075B6H9 119 aa14.32□□□□□ -0.12
SDCBP-204ENST00000447182 GAGE12HA6NDE8 117 aa14.32□□□□□ -0.12
SDCBP-204ENST00000447182 IGHV3-11P01762 117 aa14.32□□□□□ -0.12
SDCBP-204ENST00000447182 SH2D6Q7Z4S9 175 aa14.32□□□□□ -0.12
SDCBP-204ENST00000447182 SPATA25Q9BR10 227 aa14.32□□□□□ -0.12
SDCBP-204ENST00000447182 TSSC4Q9Y5U2 329 aaPredicted RBP14.32□□□□□ -0.12
SDCBP-204ENST00000447182 ABCA2Q9BZC7 2435 aa14.32□□□□□ -0.12
SDCBP-204ENST00000447182 SCGB1D4Q6XE38 83 aa14.32□□□□□ -0.12
SDCBP-204ENST00000447182 SPAG8Q99932 426 aaPredicted RBP14.32□□□□□ -0.12
SDCBP-204ENST00000447182 PGPEP1Q9NXJ5 209 aa14.32□□□□□ -0.12
SDCBP-204ENST00000447182 ZFP2Q6ZN57 461 aa14.31□□□□□ -0.12
SDCBP-204ENST00000447182 PLEKHB2Q96CS7 222 aa14.31□□□□□ -0.12
SDCBP-204ENST00000447182 TMEM141Q96I45 108 aa14.31□□□□□ -0.12
SDCBP-204ENST00000447182 DAZ1Q9NQZ3 744 aaKnown RBP14.31□□□□□ -0.12
SDCBP-204ENST00000447182 COL6A6A6NMZ7 2263 aa14.3□□□□□ -0.12
SDCBP-204ENST00000447182 C11orf86A6NJI1 115 aa14.3□□□□□ -0.12
SDCBP-204ENST00000447182 IGHV4-39P01824 125 aa14.3□□□□□ -0.12
SDCBP-204ENST00000447182 AZU1P20160 251 aa14.3□□□□□ -0.12
SDCBP-204ENST00000447182 PMVKQ15126 192 aa14.3□□□□□ -0.12
SDCBP-204ENST00000447182 TP53TG1Q9Y2A0 90 aa14.3□□□□□ -0.12
SDCBP-204ENST00000447182 ZFHX3Q15911 3703 aa14.3□□□□□ -0.12
SDCBP-204ENST00000447182 A6NDX4 124 aa14.3□□□□□ -0.12
SDCBP-204ENST00000447182 HERVK_113P61574 105 aa14.3□□□□□ -0.12
SDCBP-204ENST00000447182 TIMM17AQ99595 171 aa14.3□□□□□ -0.12
SDCBP-204ENST00000447182 MRPL16Q9NX20 251 aaKnown RBP14.3□□□□□ -0.12
SDCBP-204ENST00000447182 VCYO14598 125 aa14.29□□□□□ -0.12
SDCBP-204ENST00000447182 IGLV1-40P01703 118 aa14.29□□□□□ -0.12
SDCBP-204ENST00000447182 PF4V1P10720 104 aa14.29□□□□□ -0.12
SDCBP-204ENST00000447182 SUMO4Q6EEV6 95 aa14.29□□□□□ -0.12
SDCBP-204ENST00000447182 FAM159AQ6UWV7 190 aa14.29□□□□□ -0.12
SDCBP-204ENST00000447182 CD7P09564 240 aa14.29□□□□□ -0.12
SDCBP-204ENST00000447182 SRSF9Q13242 221 aaKnown RBP eCLIP14.29□□□□□ -0.12
SDCBP-204ENST00000447182 GTSF1LQ9H1H1 148 aa14.29□□□□□ -0.12
SDCBP-204ENST00000447182 IGKV3-7A0A075B6H7 116 aa14.28□□□□□ -0.12
SDCBP-204ENST00000447182 LY6EQ16553 131 aa14.28□□□□□ -0.12
SDCBP-204ENST00000447182 LCNL1Q6ZST4 164 aa14.28□□□□□ -0.12
SDCBP-204ENST00000447182 KLHL30-AS1Q8NEE0 82 aa14.28□□□□□ -0.12
SDCBP-204ENST00000447182 KIR2DL4Q99706 377 aa14.28□□□□□ -0.12
SDCBP-204ENST00000447182 K7EMT4 169 aa14.27□□□□□ -0.12
SDCBP-204ENST00000447182 ID1P41134 155 aa14.27□□□□□ -0.12
SDCBP-204ENST00000447182 DLX4Q92988 240 aaPredicted RBP14.27□□□□□ -0.12
SDCBP-204ENST00000447182 AKAP6Q13023 2319 aa14.27□□□□□ -0.13
SDCBP-204ENST00000447182 A0A0J9YY99 117 aa14.27□□□□□ -0.13
SDCBP-204ENST00000447182 TRBV6-5A0A0K0K1A5 114 aa14.27□□□□□ -0.13
SDCBP-204ENST00000447182 CFAP126Q5VTH2 177 aa14.27□□□□□ -0.13
SDCBP-204ENST00000447182 TRBV27A0A0K0K1C4 114 aa14.26□□□□□ -0.13
SDCBP-204ENST00000447182 H3BUX3 64 aa14.26□□□□□ -0.13
SDCBP-204ENST00000447182 LGALS9O00182 355 aa14.26□□□□□ -0.13
SDCBP-204ENST00000447182 IGHV4-38-2P0DP08 117 aa14.26□□□□□ -0.13
SDCBP-204ENST00000447182 MTURNQ8N3F0 131 aa14.26□□□□□ -0.13
SDCBP-204ENST00000447182 ATP6V0E2Q8NHE4 81 aa14.26□□□□□ -0.13
SDCBP-204ENST00000447182 DCANP1Q8TF63 244 aa14.26□□□□□ -0.13
SDCBP-204ENST00000447182 JPT2Q9H910 190 aa14.26□□□□□ -0.13
SDCBP-204ENST00000447182 TSPAN13O95857 204 aa14.26□□□□□ -0.13
SDCBP-204ENST00000447182 UBE2D3P61077 147 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms