RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SEC11BP0C7V7 166 aa9.28□□□□□ -0.92
HMGN1-208ENST00000443046 RNASE3P12724 160 aaKnown RBP9.28□□□□□ -0.92
HMGN1-208ENST00000443046 IL7P13232 177 aa9.28□□□□□ -0.92
HMGN1-208ENST00000443046 KHDC3LQ587J8 217 aa9.28□□□□□ -0.92
HMGN1-208ENST00000443046 CMTM2Q8TAZ6 248 aa9.28□□□□□ -0.92
HMGN1-208ENST00000443046 NMES1Q9C002 83 aa9.28□□□□□ -0.92
HMGN1-208ENST00000443046 PARLQ9H300 379 aa9.28□□□□□ -0.92
HMGN1-208ENST00000443046 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
HMGN1-208ENST00000443046 OR10G9Q8NGN4 311 aa9.27□□□□□ -0.93
HMGN1-208ENST00000443046 SAMD10Q9BYL1 202 aa9.27□□□□□ -0.93
HMGN1-208ENST00000443046 MBD2Q9UBB5 411 aa9.27□□□□□ -0.93
HMGN1-208ENST00000443046 KLK12Q9UKR0 248 aa9.27□□□□□ -0.93
HMGN1-208ENST00000443046 RPH3ALQ9UNE2 315 aa9.27□□□□□ -0.93
HMGN1-208ENST00000443046 TRAV6A0A075B6T7 132 aa9.26□□□□□ -0.93
HMGN1-208ENST00000443046 C17orf112F2Z3M2 114 aa9.26□□□□□ -0.93
HMGN1-208ENST00000443046 TAAR5O14804 337 aa9.26□□□□□ -0.93
HMGN1-208ENST00000443046 TAS2R45P59539 299 aa9.26□□□□□ -0.93
HMGN1-208ENST00000443046 C14orf177Q52M58 125 aa9.26□□□□□ -0.93
HMGN1-208ENST00000443046 FAM74A1Q5RGS3 127 aa9.26□□□□□ -0.93
HMGN1-208ENST00000443046 CHCHD7Q9BUK0 85 aa9.26□□□□□ -0.93
HMGN1-208ENST00000443046 A8MWV9 139 aa9.25□□□□□ -0.93
HMGN1-208ENST00000443046 LYRM1O43325 122 aa9.25□□□□□ -0.93
HMGN1-208ENST00000443046 FGF8P55075 233 aaPredicted RBP9.25□□□□□ -0.93
HMGN1-208ENST00000443046 C14orf178Q8N769 122 aaPredicted RBP9.25□□□□□ -0.93
HMGN1-208ENST00000443046 TMEM75Q8N9X5 138 aa9.25□□□□□ -0.93
HMGN1-208ENST00000443046 UBE2WQ96B02 151 aa9.25□□□□□ -0.93
HMGN1-208ENST00000443046 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
HMGN1-208ENST00000443046 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
HMGN1-208ENST00000443046 NUDT15Q9NV35 164 aa9.25□□□□□ -0.93
HMGN1-208ENST00000443046 URGCP-MRPS24S4R325 110 aa9.25□□□□□ -0.93
HMGN1-208ENST00000443046 EIF3GO75821 320 aaKnown RBP eCLIP9.24□□□□□ -0.93
HMGN1-208ENST00000443046 GNG5P63218 68 aa9.24□□□□□ -0.93
HMGN1-208ENST00000443046 FFAR4Q5NUL3 377 aa9.24□□□□□ -0.93
HMGN1-208ENST00000443046 OR2T35Q8NGX2 323 aa9.24□□□□□ -0.93
HMGN1-208ENST00000443046 SGK494Q96LW2 274 aa9.24□□□□□ -0.93
HMGN1-208ENST00000443046 RBM38Q9H0Z9 239 aaKnown RBP9.24□□□□□ -0.93
HMGN1-208ENST00000443046 OR5AC2Q9NZP5 309 aa9.24□□□□□ -0.93
HMGN1-208ENST00000443046 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.24□□□□□ -0.93
HMGN1-208ENST00000443046 H0YIZ8 118 aa9.23□□□□□ -0.93
HMGN1-208ENST00000443046 PANO1I0J062 215 aa9.23□□□□□ -0.93
HMGN1-208ENST00000443046 GCGP01275 180 aa9.23□□□□□ -0.93
HMGN1-208ENST00000443046 Q0VG73 95 aa9.23□□□□□ -0.93
HMGN1-208ENST00000443046 ELOBQ15370 118 aa9.23□□□□□ -0.93
HMGN1-208ENST00000443046 C9orf163Q8N9P6 203 aa9.23□□□□□ -0.93
HMGN1-208ENST00000443046 JPT2Q9H910 190 aa9.23□□□□□ -0.93
HMGN1-208ENST00000443046 SERTM2A0A1B0GWG4 89 aa9.22□□□□□ -0.93
HMGN1-208ENST00000443046 DGAT2L7PQ6IED9 249 aa9.22□□□□□ -0.93
HMGN1-208ENST00000443046 ENHOQ6UWT2 76 aa9.22□□□□□ -0.93
HMGN1-208ENST00000443046 PQLC2Q6ZP29 291 aa9.22□□□□□ -0.93
HMGN1-208ENST00000443046 NDFIP1Q9BT67 221 aa9.22□□□□□ -0.93
HMGN1-208ENST00000443046 A0A087WX48 190 aa9.21□□□□□ -0.94
HMGN1-208ENST00000443046 PRSS1P07477 247 aa9.21□□□□□ -0.94
HMGN1-208ENST00000443046 SDIM1Q6ZPB5 146 aa9.21□□□□□ -0.94
HMGN1-208ENST00000443046 OR10G7Q8NGN6 311 aa9.21□□□□□ -0.94
HMGN1-208ENST00000443046 IGKV3D-20A0A0C4DH25 116 aa9.2□□□□□ -0.94
HMGN1-208ENST00000443046 CCDC160A6NGH7 325 aa9.2□□□□□ -0.94
HMGN1-208ENST00000443046 USP17L23D6RBM5 183 aa9.2□□□□□ -0.94
HMGN1-208ENST00000443046 TCRAP04437 139 aa9.2□□□□□ -0.94
HMGN1-208ENST00000443046 H2AFB2P0C5Z0 115 aa9.2□□□□□ -0.94
HMGN1-208ENST00000443046 CIRBPQ14011 172 aaKnown RBP9.2□□□□□ -0.94
HMGN1-208ENST00000443046 LGALSLQ3ZCW2 172 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-208ENST00000443046 C1orf43Q9BWL3 253 aa9.2□□□□□ -0.94
HMGN1-208ENST00000443046 PSG8Q9UQ74 426 aa9.2□□□□□ -0.94
HMGN1-208ENST00000443046 A0A0D9SG52 128 aa9.19□□□□□ -0.94
HMGN1-208ENST00000443046 SMUG1Q53HV7 270 aa9.19□□□□□ -0.94
HMGN1-208ENST00000443046 DMRTA1Q5VZB9 504 aa9.19□□□□□ -0.94
HMGN1-208ENST00000443046 SUN5Q8TC36 379 aa9.19□□□□□ -0.94
HMGN1-208ENST00000443046 IL36BQ9NZH7 164 aa9.19□□□□□ -0.94
HMGN1-208ENST00000443046 RHODO00212 210 aa9.18□□□□□ -0.94
HMGN1-208ENST00000443046 SIX6O95475 246 aa9.18□□□□□ -0.94
HMGN1-208ENST00000443046 ASIPP42127 132 aa9.18□□□□□ -0.94
HMGN1-208ENST00000443046 C5orf17Q8NAS9 161 aa9.18□□□□□ -0.94
HMGN1-208ENST00000443046 OR2G3Q8NGZ4 309 aa9.18□□□□□ -0.94
HMGN1-208ENST00000443046 UBE2D3P61077 147 aa9.17□□□□□ -0.94
HMGN1-208ENST00000443046 UBE2D2P62837 147 aa9.17□□□□□ -0.94
HMGN1-208ENST00000443046 FLI1Q01543 452 aaPredicted RBP9.17□□□□□ -0.94
HMGN1-208ENST00000443046 DNLZQ5SXM8 178 aa9.17□□□□□ -0.94
HMGN1-208ENST00000443046 TRBV10-1A0A0K0K1A3 114 aa9.16□□□□□ -0.94
HMGN1-208ENST00000443046 K7EQM0 130 aa9.16□□□□□ -0.94
HMGN1-208ENST00000443046 S100A4P26447 101 aaKnown RBP9.16□□□□□ -0.94
HMGN1-208ENST00000443046 RPL19P84098 196 aaKnown RBP9.16□□□□□ -0.94
HMGN1-208ENST00000443046 ZFP69Q49AA0 526 aa9.16□□□□□ -0.94
HMGN1-208ENST00000443046 LRRC37A5PQ49AS3 106 aa9.16□□□□□ -0.94
HMGN1-208ENST00000443046 KRTAP26-1Q6PEX3 210 aa9.16□□□□□ -0.94
HMGN1-208ENST00000443046 KCNIP4Q6PIL6 250 aa9.16□□□□□ -0.94
HMGN1-208ENST00000443046 ZC2HC1AQ96GY0 325 aa9.16□□□□□ -0.94
HMGN1-208ENST00000443046 HSPB11Q9Y547 144 aa9.16□□□□□ -0.94
HMGN1-208ENST00000443046 A0A1W2PPV4 95 aa9.15□□□□□ -0.94
HMGN1-208ENST00000443046 RAB2AP61019 212 aa9.15□□□□□ -0.94
HMGN1-208ENST00000443046 SAPCD1Q5SSQ6 148 aa9.15□□□□□ -0.94
HMGN1-208ENST00000443046 PRNTQ86SH4 94 aa9.15□□□□□ -0.94
HMGN1-208ENST00000443046 C15orf54Q8N8G6 183 aa9.15□□□□□ -0.94
HMGN1-208ENST00000443046 SCGB1C1Q8TD33 95 aa9.15□□□□□ -0.94
HMGN1-208ENST00000443046 SFRP2Q96HF1 295 aa9.15□□□□□ -0.94
HMGN1-208ENST00000443046 LINC01600Q96MT4 127 aa9.15□□□□□ -0.94
HMGN1-208ENST00000443046 HMGB3O15347 200 aaKnown RBP9.14□□□□□ -0.95
HMGN1-208ENST00000443046 STAG3L2P0CL84 134 aa9.14□□□□□ -0.95
HMGN1-208ENST00000443046 STAG3L3P0CL85 134 aa9.14□□□□□ -0.95
HMGN1-208ENST00000443046 ARL14EPLP0DKL9 152 aa9.14□□□□□ -0.95
HMGN1-208ENST00000443046 MIAQ16674 131 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms