RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 FAM104BQ5XKR9 115 aa11.9□□□□□ -0.5
SCARF1-203ENST00000434376 BOD1L2Q8IYS8 172 aa11.9□□□□□ -0.5
SCARF1-203ENST00000434376 PRR9Q5T870 116 aa11.9□□□□□ -0.5
SCARF1-203ENST00000434376 ADAMTSL5Q6ZMM2 481 aa11.9□□□□□ -0.5
SCARF1-203ENST00000434376 LINC00477Q96M19 166 aa11.9□□□□□ -0.5
SCARF1-203ENST00000434376 UFSP1Q6NVU6 142 aa11.89□□□□□ -0.51
SCARF1-203ENST00000434376 SH2D6Q7Z4S9 175 aa11.89□□□□□ -0.51
SCARF1-203ENST00000434376 AZU1P20160 251 aa11.89□□□□□ -0.51
SCARF1-203ENST00000434376 BMI1P35226 326 aa11.89□□□□□ -0.51
SCARF1-203ENST00000434376 TEP1Q99973 2627 aaKnown RBP11.89□□□□□ -0.51
SCARF1-203ENST00000434376 A0A1W2PRX2 142 aa11.89□□□□□ -0.51
SCARF1-203ENST00000434376 NPIPB6E9PJ23 425 aa11.89□□□□□ -0.51
SCARF1-203ENST00000434376 TSSC4Q9Y5U2 329 aaPredicted RBP11.89□□□□□ -0.51
SCARF1-203ENST00000434376 GNRH2O43555 120 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 SYNJ2BPP57105 145 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 ETDBQ3ZM63 59 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 FAM74A4Q5TZK3 123 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 OR9G4Q8NGQ1 327 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 UBR5O95071 2799 aaPredicted RBP11.88□□□□□ -0.51
SCARF1-203ENST00000434376 TRAV8-2A0A0B4J237 113 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 IGKV3D-20A0A0C4DH25 116 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 PRM2P04554 102 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 PDE6HQ13956 83 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 ZC2HC1BQ5TFG8 222 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 LYPD1Q8N2G4 141 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 B4DSR2 109 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 WFDC2Q14508 124 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 LGALS9BQ3B8N2 356 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 LGALS9CQ6DKI2 356 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 CHAC1Q9BUX1 264 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 UNC79Q9P2D8 2635 aa11.88□□□□□ -0.51
SCARF1-203ENST00000434376 SETXQ7Z333 2677 aaKnown RBP11.87□□□□□ -0.51
SCARF1-203ENST00000434376 H3BMG7 143 aa11.87□□□□□ -0.51
SCARF1-203ENST00000434376 C14orf178Q8N769 122 aaPredicted RBP11.87□□□□□ -0.51
SCARF1-203ENST00000434376 SPOCK3Q9BQ16 436 aa11.87□□□□□ -0.51
SCARF1-203ENST00000434376 MAP1LC3AQ9H492 121 aa11.87□□□□□ -0.51
SCARF1-203ENST00000434376 F5H697 171 aa11.86□□□□□ -0.51
SCARF1-203ENST00000434376 SCGB2A2Q13296 93 aa11.86□□□□□ -0.51
SCARF1-203ENST00000434376 OR5A1Q8NGJ0 315 aa11.86□□□□□ -0.51
SCARF1-203ENST00000434376 TRBV7-1A0A0A6YYK4 115 aa11.86□□□□□ -0.51
SCARF1-203ENST00000434376 RAB9AP51151 201 aa11.86□□□□□ -0.51
SCARF1-203ENST00000434376 C18orf65Q6ZTR6 163 aa11.86□□□□□ -0.51
SCARF1-203ENST00000434376 TRAV12-3A0A0B4J271 114 aa11.85□□□□□ -0.51
SCARF1-203ENST00000434376 PSMG4Q5JS54 123 aa11.85□□□□□ -0.51
SCARF1-203ENST00000434376 OR10J6PQ8NGY7 276 aa11.85□□□□□ -0.51
SCARF1-203ENST00000434376 TMEM158Q8WZ71 300 aa11.85□□□□□ -0.51
SCARF1-203ENST00000434376 HIST1H4GQ99525 98 aa11.85□□□□□ -0.51
SCARF1-203ENST00000434376 JPT2Q9H910 190 aa11.85□□□□□ -0.51
SCARF1-203ENST00000434376 ATRQ13535 2644 aa11.84□□□□□ -0.51
SCARF1-203ENST00000434376 A0A087WWL8 130 aa11.84□□□□□ -0.51
SCARF1-203ENST00000434376 TMEM8BA6NDV4 472 aa11.84□□□□□ -0.51
SCARF1-203ENST00000434376 SIGMAR1Q99720 223 aa11.84□□□□□ -0.51
SCARF1-203ENST00000434376 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.83□□□□□ -0.52
SCARF1-203ENST00000434376 EMP1P54849 157 aa11.83□□□□□ -0.52
SCARF1-203ENST00000434376 PHLDA3Q9Y5J5 127 aa11.83□□□□□ -0.52
SCARF1-203ENST00000434376 HOXA3O43365 443 aaPredicted RBP11.83□□□□□ -0.52
SCARF1-203ENST00000434376 CIDEAO60543 219 aa11.83□□□□□ -0.52
SCARF1-203ENST00000434376 IGKCP01834 107 aa11.83□□□□□ -0.52
SCARF1-203ENST00000434376 ZNF479Q96JC4 524 aa11.83□□□□□ -0.52
SCARF1-203ENST00000434376 TRBV25-1A0A075B6N4 114 aa11.83□□□□□ -0.52
SCARF1-203ENST00000434376 Q6AWC8 147 aa11.83□□□□□ -0.52
SCARF1-203ENST00000434376 KLK9Q9UKQ9 250 aa11.83□□□□□ -0.52
SCARF1-203ENST00000434376 A0A1B0GW15 77 aa11.82□□□□□ -0.52
SCARF1-203ENST00000434376 ANXA2RQ3ZCQ2 193 aa11.82□□□□□ -0.52
SCARF1-203ENST00000434376 Q96MF0 132 aa11.82□□□□□ -0.52
SCARF1-203ENST00000434376 IGHV3-73A0A0B4J1V6 119 aa11.81□□□□□ -0.52
SCARF1-203ENST00000434376 TNFRSF6BO95407 300 aa11.81□□□□□ -0.52
SCARF1-203ENST00000434376 SLC50A1Q9BRV3 221 aa11.81□□□□□ -0.52
SCARF1-203ENST00000434376 MRPL35Q9NZE8 188 aaKnown RBP11.81□□□□□ -0.52
SCARF1-203ENST00000434376 RPL39LQ96EH5 51 aaKnown RBP11.8□□□□□ -0.52
SCARF1-203ENST00000434376 A0A1B0GWB2 263 aa11.8□□□□□ -0.52
SCARF1-203ENST00000434376 SPINK13Q1W4C9 94 aa11.8□□□□□ -0.52
SCARF1-203ENST00000434376 J3QR89 54 aa11.8□□□□□ -0.52
SCARF1-203ENST00000434376 IGHV3OR16-12A0A075B7B8 117 aa11.79□□□□□ -0.52
SCARF1-203ENST00000434376 LOC107984156A0A0G2JMH3 177 aa11.79□□□□□ -0.52
SCARF1-203ENST00000434376 GAGE12HA6NDE8 117 aa11.79□□□□□ -0.52
SCARF1-203ENST00000434376 DPM2O94777 84 aa11.79□□□□□ -0.52
SCARF1-203ENST00000434376 CD7P09564 240 aa11.79□□□□□ -0.52
SCARF1-203ENST00000434376 INSL3P51460 131 aa11.79□□□□□ -0.52
SCARF1-203ENST00000434376 SRSF2Q01130 221 aaKnown RBP11.79□□□□□ -0.52
SCARF1-203ENST00000434376 ARL17AQ8IVW1 177 aa11.79□□□□□ -0.52
SCARF1-203ENST00000434376 A6NDX4 124 aa11.79□□□□□ -0.52
SCARF1-203ENST00000434376 MYOZ3Q8TDC0 251 aa11.79□□□□□ -0.52
SCARF1-203ENST00000434376 CYSLTR1Q9Y271 337 aa11.79□□□□□ -0.52
SCARF1-203ENST00000434376 IGHG2P01859 326 aa11.78□□□□□ -0.52
SCARF1-203ENST00000434376 SMIM17P0DL12 118 aa11.78□□□□□ -0.52
SCARF1-203ENST00000434376 ODF1Q14990 250 aa11.78□□□□□ -0.52
SCARF1-203ENST00000434376 MAPKAPK5-AS1Q8N8E1 139 aa11.78□□□□□ -0.52
SCARF1-203ENST00000434376 ZNF418Q8TF45 676 aaPredicted RBP11.78□□□□□ -0.52
SCARF1-203ENST00000434376 SRSF1Q07955 248 aaKnown RBP eCLIP11.78□□□□□ -0.52
SCARF1-203ENST00000434376 GPHB5Q86YW7 130 aa11.78□□□□□ -0.52
SCARF1-203ENST00000434376 C16orf54Q6UWD8 224 aa11.77□□□□□ -0.52
SCARF1-203ENST00000434376 ZNF843Q8N446 348 aa11.77□□□□□ -0.52
SCARF1-203ENST00000434376 CLUHP3Q96NS8 147 aa11.77□□□□□ -0.52
SCARF1-203ENST00000434376 DAZ1Q9NQZ3 744 aaKnown RBP11.77□□□□□ -0.52
SCARF1-203ENST00000434376 SLURP1P55000 103 aa11.77□□□□□ -0.53
SCARF1-203ENST00000434376 ZNF493Q6ZR52 646 aa11.76□□□□□ -0.53
SCARF1-203ENST00000434376 CEND1Q8N111 149 aa11.76□□□□□ -0.53
SCARF1-203ENST00000434376 LINC01356Q8N9X3 169 aa11.76□□□□□ -0.53
SCARF1-203ENST00000434376 ZNF48Q96MX3 618 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms