RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 KLRD1Q13241 179 aa2.92□□□□□ -1.94
SHPRH-205ENST00000433355 LDLRAD2Q5SZI1 272 aa2.92□□□□□ -1.94
SHPRH-205ENST00000433355 Q6ZPA2 131 aa2.92□□□□□ -1.94
SHPRH-205ENST00000433355 C16orf74Q96GX8 76 aa2.92□□□□□ -1.94
SHPRH-205ENST00000433355 MDFICQ9P1T7 246 aa2.92□□□□□ -1.94
SHPRH-205ENST00000433355 TIRAPP58753 221 aa2.92□□□□□ -1.94
SHPRH-205ENST00000433355 C10orf126Q8N4M7 172 aa2.92□□□□□ -1.94
SHPRH-205ENST00000433355 CTSZQ9UBR2 303 aa2.92□□□□□ -1.94
SHPRH-205ENST00000433355 ATP6V0E1O15342 81 aa2.92□□□□□ -1.94
SHPRH-205ENST00000433355 NDUFA7O95182 113 aa2.92□□□□□ -1.94
SHPRH-205ENST00000433355 GCSAMLQ5JQS6 135 aa2.92□□□□□ -1.94
SHPRH-205ENST00000433355 TOMM6Q96B49 74 aa2.92□□□□□ -1.94
SHPRH-205ENST00000433355 IGLV2-11P01706 119 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 KIR2DL5BQ8NHK3 375 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 A0A1W2PNU3 283 aaPredicted RBP2.91□□□□□ -1.94
SHPRH-205ENST00000433355 IGHV1-58A0A0C4DH39 117 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 A0A1B0GV90 55 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 CRPP02741 224 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 COX17Q14061 63 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 Q8N7P7 452 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 TMEM263Q8WUH6 116 aaKnown RBP2.91□□□□□ -1.94
SHPRH-205ENST00000433355 RCHY1Q96PM5 261 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 PSMG3-AS1Q96PY0 264 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 A0A0B4J2C4 111 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 DAND5Q8N907 189 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 ZFAND3Q9H8U3 227 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 ZNF815PA8K554 130 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 CRLF1O75462 422 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 NXPH3O95157 252 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 TRAV3A0A0B4J244 114 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 ZC2HC1BQ5TFG8 222 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 NFE4Q86UQ8 179 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 VGLL1Q99990 258 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 CFHR3Q02985 330 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 FZR1Q9UM11 496 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 TRAV40A0A0B4J280 105 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 LMO4P61968 165 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 GPHA2Q96T91 129 aa2.91□□□□□ -1.94
SHPRH-205ENST00000433355 LYRM9A8MSI8 78 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 ZNF124Q15973 351 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 ITLN2Q8WWU7 325 aaPredicted RBP2.9□□□□□ -1.94
SHPRH-205ENST00000433355 PROP1O75360 226 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 SPINK9Q5DT21 86 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 TMEM158Q8WZ71 300 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 TRACP01848 142 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 P0DMU3 169 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 FAM231AP0DMU4 169 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 FAM231CP0DMU5 169 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 C15orf53Q8NAA6 179 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 DUX5Q96PT3 197 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 DCAF16Q9NXF7 216 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 K7EN84 100 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 IGHV3-53P01767 116 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 ZNF664Q8N3J9 261 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 C18orf15Q96N68 181 aa2.9□□□□□ -1.94
SHPRH-205ENST00000433355 E9PLD3 99 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 CD7P09564 240 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 DMRTC1Q5HYR2 192 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 FANCD2OSQ96PS1 177 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 UBE2L6O14933 153 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 Q8N2B8 174 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 RNASE4P34096 147 aaKnown RBP2.9□□□□□ -1.95
SHPRH-205ENST00000433355 ATP1A1-AS1Q5TC04 95 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 CCDC140Q96MF4 163 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 AGPAT4-IT1Q9H0P7 198 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 APCP25054 2843 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 ARMS2P0C7Q2 107 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 HOXD3P31249 432 aaPredicted RBP2.9□□□□□ -1.95
SHPRH-205ENST00000433355 J3QQQ9 107 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 SLC25A20O43772 301 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 CSN3P07498 182 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 IL17DQ8TAD2 202 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 TGFAP01135 160 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 IGHV4-39P01824 125 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 MRPL51Q4U2R6 128 aaKnown RBP2.9□□□□□ -1.95
SHPRH-205ENST00000433355 C20orf203Q8NBC4 194 aa2.9□□□□□ -1.95
SHPRH-205ENST00000433355 H3BVH4 76 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 PATE2Q6UY27 113 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 IGLV2-8P01709 118 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 HINT1P49773 126 aaPredicted RBP2.89□□□□□ -1.95
SHPRH-205ENST00000433355 CLEC19AQ6UXS0 136 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 ZNF503Q96F45 646 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 SCRT2Q9NQ03 307 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 PRO1854Q9UHT4 67 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 LINC01560Q8TB33 94 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 Q96MF0 132 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 DUX3Q96PT4 197 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 TINCRA0A1B0GVN0 87 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 GAGE12BA1L429 117 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 A6NDX4 124 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 CD28P10747 220 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 TRBV25-1A0A075B6N4 114 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 Q8N9W7 124 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 HOXA3O43365 443 aaPredicted RBP2.89□□□□□ -1.95
SHPRH-205ENST00000433355 CFAP161Q6P656 301 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 NF1P21359 2839 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 A0A1W2PPM0 123 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 ERCC8Q13216 396 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 SLC25A29Q8N8R3 303 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 CYYR1Q96J86 154 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms