RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 TPPP3Q9BW30 176 aa12.28□□□□□ -0.44
LINC00887-203ENST00000429578 SCRT2Q9NQ03 307 aa12.28□□□□□ -0.44
LINC00887-203ENST00000429578 PLAC8L1A1L4L8 177 aa12.27□□□□□ -0.45
LINC00887-203ENST00000429578 CTRLP40313 264 aa12.27□□□□□ -0.45
LINC00887-203ENST00000429578 LYZL1Q6UWQ5 148 aa12.27□□□□□ -0.45
LINC00887-203ENST00000429578 TIMM8BQ9Y5J9 83 aaPredicted RBP12.27□□□□□ -0.45
LINC00887-203ENST00000429578 SNURFLB1AK76 121 aa12.26□□□□□ -0.45
LINC00887-203ENST00000429578 FAM3BP58499 235 aaPredicted RBP12.26□□□□□ -0.45
LINC00887-203ENST00000429578 KCNIP4Q6PIL6 250 aa12.26□□□□□ -0.45
LINC00887-203ENST00000429578 Q8NAQ8 132 aa12.26□□□□□ -0.45
LINC00887-203ENST00000429578 IL17DQ8TAD2 202 aa12.26□□□□□ -0.45
LINC00887-203ENST00000429578 PGLYRP4Q96LB8 373 aa12.26□□□□□ -0.45
LINC00887-203ENST00000429578 PHLDA3Q9Y5J5 127 aa12.26□□□□□ -0.45
LINC00887-203ENST00000429578 TENM3Q9P273 2699 aa12.26□□□□□ -0.45
LINC00887-203ENST00000429578 IGHV4-28A0A0C4DH34 117 aa12.25□□□□□ -0.45
LINC00887-203ENST00000429578 S100PP25815 95 aa12.25□□□□□ -0.45
LINC00887-203ENST00000429578 SPXQ9BT56 116 aa12.25□□□□□ -0.45
LINC00887-203ENST00000429578 CNFNQ9BYD5 112 aa12.25□□□□□ -0.45
LINC00887-203ENST00000429578 URGCP-MRPS24S4R325 110 aa12.25□□□□□ -0.45
LINC00887-203ENST00000429578 DAZ2Q13117 558 aaKnown RBP12.25□□□□□ -0.45
LINC00887-203ENST00000429578 TMEM88Q6PEY1 159 aa12.25□□□□□ -0.45
LINC00887-203ENST00000429578 OR10AG1Q8NH19 301 aa12.25□□□□□ -0.45
LINC00887-203ENST00000429578 ZMAT4Q9H898 229 aa12.25□□□□□ -0.45
LINC00887-203ENST00000429578 SMCO4Q9NRQ5 59 aa12.25□□□□□ -0.45
LINC00887-203ENST00000429578 NACAE9PAV3 2078 aa12.24□□□□□ -0.45
LINC00887-203ENST00000429578 MUC21A0A0G2JKD1 596 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 MUC21A0A140T8X8 626 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 M0R2P5 195 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 WDR73Q6P4I2 378 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 CBLN2Q8IUK8 224 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 BORCS7Q96B45 105 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 TRAV9-1A0A075B6T8 112 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 A0A1B0GUT8 65 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 SCO1O75880 301 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 EMP1P54849 157 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 CACNG7P62955 275 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 SPANXN1Q5VSR9 72 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 BTF3L4Q96K17 158 aa12.23□□□□□ -0.45
LINC00887-203ENST00000429578 NOP10Q9NPE3 64 aaKnown RBP12.23□□□□□ -0.45
LINC00887-203ENST00000429578 IGHV4-4A0A075B6R2 117 aa12.22□□□□□ -0.45
LINC00887-203ENST00000429578 M0R381 172 aa12.22□□□□□ -0.45
LINC00887-203ENST00000429578 SPINK4O60575 86 aa12.22□□□□□ -0.45
LINC00887-203ENST00000429578 NTF3P20783 257 aa12.22□□□□□ -0.45
LINC00887-203ENST00000429578 ELOBQ15370 118 aa12.22□□□□□ -0.45
LINC00887-203ENST00000429578 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
LINC00887-203ENST00000429578 ZFP82Q8N141 532 aa12.22□□□□□ -0.45
LINC00887-203ENST00000429578 PTH2Q96A98 100 aa12.22□□□□□ -0.45
LINC00887-203ENST00000429578 COL7A1Q02388 2944 aa12.21□□□□□ -0.45
LINC00887-203ENST00000429578 DEFB4AO15263 64 aa12.21□□□□□ -0.45
LINC00887-203ENST00000429578 NXPH4O95158 308 aa12.21□□□□□ -0.45
LINC00887-203ENST00000429578 SSTP61278 116 aa12.21□□□□□ -0.45
LINC00887-203ENST00000429578 LGALS9BQ3B8N2 356 aa12.21□□□□□ -0.45
LINC00887-203ENST00000429578 ZNF876PQ49A33 203 aa12.21□□□□□ -0.45
LINC00887-203ENST00000429578 SYT8Q8NBV8 401 aa12.21□□□□□ -0.45
LINC00887-203ENST00000429578 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
LINC00887-203ENST00000429578 RIGQ13278 110 aa12.2□□□□□ -0.46
LINC00887-203ENST00000429578 PIK3CD-AS1Q5SR53 167 aa12.2□□□□□ -0.46
LINC00887-203ENST00000429578 RASL10AQ92737 203 aa12.2□□□□□ -0.46
LINC00887-203ENST00000429578 C11orf68Q9H3H3 251 aaKnown RBP12.2□□□□□ -0.46
LINC00887-203ENST00000429578 TWIST1Q15672 202 aa12.2□□□□□ -0.46
LINC00887-203ENST00000429578 ATP5L2Q7Z4Y8 100 aa12.2□□□□□ -0.46
LINC00887-203ENST00000429578 YPEL4Q96NS1 127 aa12.2□□□□□ -0.46
LINC00887-203ENST00000429578 MRPL16Q9NX20 251 aaKnown RBP12.2□□□□□ -0.46
LINC00887-203ENST00000429578 TRGV1A0A0A0MS02 117 aa12.19□□□□□ -0.46
LINC00887-203ENST00000429578 LYRM9A8MSI8 78 aa12.19□□□□□ -0.46
LINC00887-203ENST00000429578 MRPL54Q6P161 138 aaKnown RBP12.19□□□□□ -0.46
LINC00887-203ENST00000429578 Q6ZTI0 123 aa12.19□□□□□ -0.46
LINC00887-203ENST00000429578 NDUFAF3Q9BU61 184 aa12.19□□□□□ -0.46
LINC00887-203ENST00000429578 MSRB1Q9NZV6 116 aa12.19□□□□□ -0.46
LINC00887-203ENST00000429578 TRBV24-1A0A075B6N3 115 aa12.18□□□□□ -0.46
LINC00887-203ENST00000429578 FAM222AQ5U5X8 452 aa12.18□□□□□ -0.46
LINC00887-203ENST00000429578 DKK2Q9UBU2 259 aa12.18□□□□□ -0.46
LINC00887-203ENST00000429578 TGIF2-C20orf24A0A0A6YYL0 155 aa12.17□□□□□ -0.46
LINC00887-203ENST00000429578 A0A1B0GW15 77 aa12.17□□□□□ -0.46
LINC00887-203ENST00000429578 A0A1B0GXF2 115 aa12.17□□□□□ -0.46
LINC00887-203ENST00000429578 HBBP68871 147 aa12.17□□□□□ -0.46
LINC00887-203ENST00000429578 CAMPP49913 170 aa12.17□□□□□ -0.46
LINC00887-203ENST00000429578 LINC00612Q8N6U2 182 aa12.17□□□□□ -0.46
LINC00887-203ENST00000429578 A0A0J9YWU9 116 aa12.16□□□□□ -0.46
LINC00887-203ENST00000429578 TRGC1P0CF51 173 aa12.16□□□□□ -0.46
LINC00887-203ENST00000429578 SPART-AS1P0CW21 52 aa12.16□□□□□ -0.46
LINC00887-203ENST00000429578 RASL11AQ6T310 242 aa12.16□□□□□ -0.46
LINC00887-203ENST00000429578 WWC2-AS2Q96NR7 200 aa12.16□□□□□ -0.46
LINC00887-203ENST00000429578 TEX48A0A1B0GUV7 120 aa12.15□□□□□ -0.46
LINC00887-203ENST00000429578 GAGE12BA1L429 117 aa12.15□□□□□ -0.46
LINC00887-203ENST00000429578 A8MWV9 139 aa12.15□□□□□ -0.46
LINC00887-203ENST00000429578 GAGE7O76087 117 aa12.15□□□□□ -0.46
LINC00887-203ENST00000429578 S100A8P05109 93 aa12.15□□□□□ -0.46
LINC00887-203ENST00000429578 GAGE12FP0CL80 117 aa12.15□□□□□ -0.46
LINC00887-203ENST00000429578 GAGE12GP0CL81 117 aa12.15□□□□□ -0.46
LINC00887-203ENST00000429578 GAGE12IP0CL82 117 aa12.15□□□□□ -0.46
LINC00887-203ENST00000429578 AP1S3Q96PC3 154 aa12.15□□□□□ -0.46
LINC00887-203ENST00000429578 CELA1Q9UNI1 258 aa12.15□□□□□ -0.46
LINC00887-203ENST00000429578 HUWE1Q7Z6Z7 4374 aaKnown RBP12.14□□□□□ -0.47
LINC00887-203ENST00000429578 EVI2AP22794 236 aa12.14□□□□□ -0.47
LINC00887-203ENST00000429578 FAM210BQ96KR6 192 aa12.14□□□□□ -0.47
LINC00887-203ENST00000429578 JPT2Q9H910 190 aa12.14□□□□□ -0.47
LINC00887-203ENST00000429578 DEFB130BP0DP73 79 aa12.14□□□□□ -0.47
LINC00887-203ENST00000429578 DEFB130AP0DP74 79 aa12.14□□□□□ -0.47
LINC00887-203ENST00000429578 SMIM15Q7Z3B0 74 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms