RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 S100A4P26447 101 aaKnown RBP13.11□□□□□ -0.31
RARA-206ENST00000425707 UBE2D3P61077 147 aa13.11□□□□□ -0.31
RARA-206ENST00000425707 UBE2D2P62837 147 aa13.11□□□□□ -0.31
RARA-206ENST00000425707 SCGB2A2Q13296 93 aa13.11□□□□□ -0.31
RARA-206ENST00000425707 ANKHD1Q8IWZ3 2542 aaKnown RBP13.11□□□□□ -0.31
RARA-206ENST00000425707 SAA4P35542 130 aa13.11□□□□□ -0.31
RARA-206ENST00000425707 FOXI1Q12951 378 aa13.11□□□□□ -0.31
RARA-206ENST00000425707 GPHB5Q86YW7 130 aa13.11□□□□□ -0.31
RARA-206ENST00000425707 MRPL16Q9NX20 251 aaKnown RBP13.11□□□□□ -0.31
RARA-206ENST00000425707 NDUFA4O00483 81 aa13.1□□□□□ -0.31
RARA-206ENST00000425707 APOMO95445 188 aa13.1□□□□□ -0.31
RARA-206ENST00000425707 HERVK_113P61574 105 aa13.1□□□□□ -0.31
RARA-206ENST00000425707 RPL39LQ96EH5 51 aaKnown RBP13.1□□□□□ -0.31
RARA-206ENST00000425707 VCX2Q9H322 139 aa13.1□□□□□ -0.31
RARA-206ENST00000425707 CCL21O00585 134 aa13.1□□□□□ -0.31
RARA-206ENST00000425707 CD7P09564 240 aa13.1□□□□□ -0.31
RARA-206ENST00000425707 C14orf178Q8N769 122 aaPredicted RBP13.1□□□□□ -0.31
RARA-206ENST00000425707 TMEM141Q96I45 108 aa13.1□□□□□ -0.31
RARA-206ENST00000425707 CACNA1AO00555 2505 aa13.1□□□□□ -0.31
RARA-206ENST00000425707 IGHV3-49A0A0A0MS15 119 aa13.09□□□□□ -0.31
RARA-206ENST00000425707 KLK15Q9H2R5 256 aa13.09□□□□□ -0.31
RARA-206ENST00000425707 TRAV41A0A0B4J266 112 aa13.09□□□□□ -0.31
RARA-206ENST00000425707 ANXA2RQ3ZCQ2 193 aa13.09□□□□□ -0.31
RARA-206ENST00000425707 LINC01548A6NM66 108 aa13.08□□□□□ -0.32
RARA-206ENST00000425707 SCGB1D4Q6XE38 83 aa13.08□□□□□ -0.32
RARA-206ENST00000425707 CRYGDP07320 174 aa13.08□□□□□ -0.32
RARA-206ENST00000425707 KIF25-AS1Q9Y6Z4 181 aa13.08□□□□□ -0.32
RARA-206ENST00000425707 TRBV20-1A0A075B6N2 111 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 TSPAN13O95857 204 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 IGF1P05019 195 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 ARL3P36405 182 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 TIMM17AQ99595 171 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 MOB4Q9Y3A3 225 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 IGIPA6NJ69 53 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 NPFFO15130 113 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 RNASE3P12724 160 aaKnown RBP13.07□□□□□ -0.32
RARA-206ENST00000425707 ADORA2A-AS1P86434 159 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 IGLV4-69A0A075B6H9 119 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 H3BUA1 57 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 SMCPP49901 116 aaPredicted RBP13.07□□□□□ -0.32
RARA-206ENST00000425707 SRSF9Q13242 221 aaKnown RBP eCLIP13.07□□□□□ -0.32
RARA-206ENST00000425707 PMVKQ15126 192 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 SBSPONQ8IVN8 264 aa13.07□□□□□ -0.32
RARA-206ENST00000425707 A0A0J9YY99 117 aa13.06□□□□□ -0.32
RARA-206ENST00000425707 TACC2O95359 2948 aa13.06□□□□□ -0.32
RARA-206ENST00000425707 C11orf86A6NJI1 115 aa13.06□□□□□ -0.32
RARA-206ENST00000425707 MGPP08493 103 aa13.06□□□□□ -0.32
RARA-206ENST00000425707 POLR2KP53803 58 aaKnown RBP13.06□□□□□ -0.32
RARA-206ENST00000425707 LINC00315P59091 139 aa13.06□□□□□ -0.32
RARA-206ENST00000425707 PLEKHB2Q96CS7 222 aa13.06□□□□□ -0.32
RARA-206ENST00000425707 INSL3P51460 131 aa13.05□□□□□ -0.32
RARA-206ENST00000425707 NDUFA11Q86Y39 141 aa13.05□□□□□ -0.32
RARA-206ENST00000425707 MTURNQ8N3F0 131 aa13.05□□□□□ -0.32
RARA-206ENST00000425707 WNK2Q9Y3S1 2297 aa13.05□□□□□ -0.32
RARA-206ENST00000425707 TSHBP01222 138 aa13.05□□□□□ -0.32
RARA-206ENST00000425707 CLEC2AQ6UVW9 174 aa13.04□□□□□ -0.32
RARA-206ENST00000425707 USMG5Q96IX5 58 aa13.04□□□□□ -0.32
RARA-206ENST00000425707 M0QXV9 152 aa13.04□□□□□ -0.32
RARA-206ENST00000425707 VCYO14598 125 aa13.04□□□□□ -0.32
RARA-206ENST00000425707 DUSP14O95147 198 aaKnown RBP13.04□□□□□ -0.32
RARA-206ENST00000425707 ZFP2Q6ZN57 461 aa13.04□□□□□ -0.32
RARA-206ENST00000425707 SLC25A29Q8N8R3 303 aa13.04□□□□□ -0.32
RARA-206ENST00000425707 CDSNQ15517 529 aa13.03□□□□□ -0.32
RARA-206ENST00000425707 PPDPFLQ8WWR9 84 aa13.03□□□□□ -0.32
RARA-206ENST00000425707 TRBV6-5A0A0K0K1A5 114 aa13.03□□□□□ -0.32
RARA-206ENST00000425707 CDIP1Q9H305 208 aa13.03□□□□□ -0.32
RARA-206ENST00000425707 KLLNB2CW77 178 aa13.02□□□□□ -0.32
RARA-206ENST00000425707 RNASE4P34096 147 aaKnown RBP13.02□□□□□ -0.32
RARA-206ENST00000425707 LMO4P61968 165 aa13.02□□□□□ -0.32
RARA-206ENST00000425707 TEN1Q86WV5 123 aa13.02□□□□□ -0.32
RARA-206ENST00000425707 IGHV3-30P01768 117 aa13.02□□□□□ -0.33
RARA-206ENST00000425707 IGHV3-30-5P0DP03 117 aa13.02□□□□□ -0.33
RARA-206ENST00000425707 TP53TG1Q9Y2A0 90 aa13.02□□□□□ -0.33
RARA-206ENST00000425707 UNQ9165/PRO28630Q6UXU0 137 aa13.02□□□□□ -0.33
RARA-206ENST00000425707 KIR2DL4Q99706 377 aa13.02□□□□□ -0.33
RARA-206ENST00000425707 PSMB2P49721 201 aa13.01□□□□□ -0.33
RARA-206ENST00000425707 ZNF876PQ49A33 203 aa13.01□□□□□ -0.33
RARA-206ENST00000425707 PKD1L2Q7Z442 2459 aa13.01□□□□□ -0.33
RARA-206ENST00000425707 TRBV27A0A0K0K1C4 114 aa13.01□□□□□ -0.33
RARA-206ENST00000425707 GNRH2O43555 120 aa13.01□□□□□ -0.33
RARA-206ENST00000425707 NFE4Q86UQ8 179 aa13.01□□□□□ -0.33
RARA-206ENST00000425707 SYT8Q8NBV8 401 aa13.01□□□□□ -0.33
RARA-206ENST00000425707 CRYBA4P53673 196 aa13□□□□□ -0.33
RARA-206ENST00000425707 CKS1BP61024 79 aa13□□□□□ -0.33
RARA-206ENST00000425707 C10orf126Q8N4M7 172 aa13□□□□□ -0.33
RARA-206ENST00000425707 ZNF418Q8TF45 676 aaPredicted RBP13□□□□□ -0.33
RARA-206ENST00000425707 ABCA4P78363 2273 aa13□□□□□ -0.33
RARA-206ENST00000425707 RELNP78509 3460 aa13□□□□□ -0.33
RARA-206ENST00000425707 LOC107984156A0A0G2JMH3 177 aa13□□□□□ -0.33
RARA-206ENST00000425707 ARL17AQ8IVW1 177 aa13□□□□□ -0.33
RARA-206ENST00000425707 ZFYVE26Q68DK2 2539 aa13□□□□□ -0.33
RARA-206ENST00000425707 J3KRW8 73 aa12.99□□□□□ -0.33
RARA-206ENST00000425707 LGALS9O00182 355 aa12.99□□□□□ -0.33
RARA-206ENST00000425707 KLHL30-AS1Q8NEE0 82 aa12.99□□□□□ -0.33
RARA-206ENST00000425707 COL6A6A6NMZ7 2263 aa12.99□□□□□ -0.33
RARA-206ENST00000425707 IGHV1-69P01742 117 aa12.99□□□□□ -0.33
RARA-206ENST00000425707 SUMO4Q6EEV6 95 aa12.99□□□□□ -0.33
RARA-206ENST00000425707 AMELXQ99217 191 aa12.99□□□□□ -0.33
RARA-206ENST00000425707 DCHS2Q6V1P9 2916 aa12.99□□□□□ -0.33
RARA-206ENST00000425707 CFC1BP0CG36 223 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms