RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 MUC21Q5SSG8 566 aa10.34□□□□□ -0.75
SHMT1P1-201ENST00000419974 LINC01587Q99440 93 aa10.34□□□□□ -0.75
SHMT1P1-201ENST00000419974 NAGKQ9UJ70 344 aa10.34□□□□□ -0.75
SHMT1P1-201ENST00000419974 GRIFINA4D1Z8 144 aa10.33□□□□□ -0.76
SHMT1P1-201ENST00000419974 S100A4P26447 101 aaKnown RBP10.33□□□□□ -0.76
SHMT1P1-201ENST00000419974 DMRTA1Q5VZB9 504 aa10.33□□□□□ -0.76
SHMT1P1-201ENST00000419974 C11orf72Q8NBR9 251 aa10.33□□□□□ -0.76
SHMT1P1-201ENST00000419974 RNASE8Q8TDE3 154 aaKnown RBP10.33□□□□□ -0.76
SHMT1P1-201ENST00000419974 SPXQ9BT56 116 aa10.33□□□□□ -0.76
SHMT1P1-201ENST00000419974 CBY3A6NI87 242 aa10.33□□□□□ -0.76
SHMT1P1-201ENST00000419974 HLA-DQA1P01909 254 aa10.33□□□□□ -0.76
SHMT1P1-201ENST00000419974 TMEM136Q6ZRR5 245 aa10.33□□□□□ -0.76
SHMT1P1-201ENST00000419974 IL17DQ8TAD2 202 aa10.33□□□□□ -0.76
SHMT1P1-201ENST00000419974 TMEM263Q8WUH6 116 aaKnown RBP10.33□□□□□ -0.76
SHMT1P1-201ENST00000419974 TP53TG1Q9Y2A0 90 aa10.33□□□□□ -0.76
SHMT1P1-201ENST00000419974 H3BVH4 76 aa10.32□□□□□ -0.76
SHMT1P1-201ENST00000419974 PHOX2AO14813 284 aa10.32□□□□□ -0.76
SHMT1P1-201ENST00000419974 NTF3P20783 257 aa10.32□□□□□ -0.76
SHMT1P1-201ENST00000419974 ZNF415Q09FC8 603 aa10.32□□□□□ -0.76
SHMT1P1-201ENST00000419974 ZFP82Q8N141 532 aa10.32□□□□□ -0.76
SHMT1P1-201ENST00000419974 FRZBQ92765 325 aa10.32□□□□□ -0.76
SHMT1P1-201ENST00000419974 TMEM208Q9BTX3 173 aa10.32□□□□□ -0.76
SHMT1P1-201ENST00000419974 MDFICQ9P1T7 246 aa10.32□□□□□ -0.76
SHMT1P1-201ENST00000419974 PHLDA3Q9Y5J5 127 aa10.32□□□□□ -0.76
SHMT1P1-201ENST00000419974 SPRY2O43597 315 aa10.31□□□□□ -0.76
SHMT1P1-201ENST00000419974 DAZ2Q13117 558 aaKnown RBP10.31□□□□□ -0.76
SHMT1P1-201ENST00000419974 MRPL54Q6P161 138 aaKnown RBP10.31□□□□□ -0.76
SHMT1P1-201ENST00000419974 OR10AG1Q8NH19 301 aa10.31□□□□□ -0.76
SHMT1P1-201ENST00000419974 C16orf74Q96GX8 76 aa10.31□□□□□ -0.76
SHMT1P1-201ENST00000419974 TMEM191AQ9H0A3 160 aa10.31□□□□□ -0.76
SHMT1P1-201ENST00000419974 RPS10P46783 165 aaKnown RBP10.3□□□□□ -0.76
SHMT1P1-201ENST00000419974 LGALS9BQ3B8N2 356 aa10.3□□□□□ -0.76
SHMT1P1-201ENST00000419974 RASL10AQ92737 203 aa10.3□□□□□ -0.76
SHMT1P1-201ENST00000419974 RNF183Q96D59 192 aa10.3□□□□□ -0.76
SHMT1P1-201ENST00000419974 OVOL2Q9BRP0 275 aa10.3□□□□□ -0.76
SHMT1P1-201ENST00000419974 M0R2P5 195 aa10.29□□□□□ -0.76
SHMT1P1-201ENST00000419974 PRB2P02812 416 aaPredicted RBP10.29□□□□□ -0.76
SHMT1P1-201ENST00000419974 FRMD6-AS1P0C7T7 363 aa10.29□□□□□ -0.76
SHMT1P1-201ENST00000419974 TRGC1P0CF51 173 aa10.29□□□□□ -0.76
SHMT1P1-201ENST00000419974 TWIST1Q15672 202 aa10.29□□□□□ -0.76
SHMT1P1-201ENST00000419974 RRN3P1Q2M238 152 aa10.29□□□□□ -0.76
SHMT1P1-201ENST00000419974 SPANXN1Q5VSR9 72 aa10.29□□□□□ -0.76
SHMT1P1-201ENST00000419974 POM121L12Q8N7R1 296 aa10.29□□□□□ -0.76
SHMT1P1-201ENST00000419974 SYT8Q8NBV8 401 aa10.29□□□□□ -0.76
SHMT1P1-201ENST00000419974 TPPP3Q9BW30 176 aa10.29□□□□□ -0.76
SHMT1P1-201ENST00000419974 TRAPPC1Q9Y5R8 145 aa10.29□□□□□ -0.76
SHMT1P1-201ENST00000419974 PLAC8L1A1L4L8 177 aa10.28□□□□□ -0.76
SHMT1P1-201ENST00000419974 SNURFLB1AK76 121 aa10.28□□□□□ -0.76
SHMT1P1-201ENST00000419974 SPINK4O60575 86 aa10.28□□□□□ -0.76
SHMT1P1-201ENST00000419974 MRAPQ8TCY5 172 aa10.28□□□□□ -0.76
SHMT1P1-201ENST00000419974 RCHY1Q96PM5 261 aa10.28□□□□□ -0.76
SHMT1P1-201ENST00000419974 X6R8D5 127 aa10.28□□□□□ -0.76
SHMT1P1-201ENST00000419974 TRGC2P03986 189 aa10.27□□□□□ -0.77
SHMT1P1-201ENST00000419974 MIFP14174 115 aa10.27□□□□□ -0.77
SHMT1P1-201ENST00000419974 AZU1P20160 251 aa10.27□□□□□ -0.77
SHMT1P1-201ENST00000419974 CAMPP49913 170 aa10.27□□□□□ -0.77
SHMT1P1-201ENST00000419974 FAM104BQ5XKR9 115 aa10.27□□□□□ -0.77
SHMT1P1-201ENST00000419974 SMIM15Q7Z3B0 74 aa10.27□□□□□ -0.77
SHMT1P1-201ENST00000419974 C18orf15Q96N68 181 aa10.27□□□□□ -0.77
SHMT1P1-201ENST00000419974 GSN-AS1Q9NRJ2 163 aa10.27□□□□□ -0.77
SHMT1P1-201ENST00000419974 CIDEAO60543 219 aa10.26□□□□□ -0.77
SHMT1P1-201ENST00000419974 APCSP02743 223 aa10.26□□□□□ -0.77
SHMT1P1-201ENST00000419974 ZNF876PQ49A33 203 aa10.26□□□□□ -0.77
SHMT1P1-201ENST00000419974 AP1S3Q96PC3 154 aa10.26□□□□□ -0.77
SHMT1P1-201ENST00000419974 MRPL18Q9H0U6 180 aaKnown RBP10.26□□□□□ -0.77
SHMT1P1-201ENST00000419974 MSRB1Q9NZV6 116 aa10.26□□□□□ -0.77
SHMT1P1-201ENST00000419974 KIF25-AS1Q9Y6Z4 181 aa10.26□□□□□ -0.77
SHMT1P1-201ENST00000419974 A8MWV9 139 aa10.25□□□□□ -0.77
SHMT1P1-201ENST00000419974 PPBPP02775 128 aa10.25□□□□□ -0.77
SHMT1P1-201ENST00000419974 FABP9Q0Z7S8 132 aa10.25□□□□□ -0.77
SHMT1P1-201ENST00000419974 SLAQ13239 276 aa10.25□□□□□ -0.77
SHMT1P1-201ENST00000419974 LINC00612Q8N6U2 182 aa10.25□□□□□ -0.77
SHMT1P1-201ENST00000419974 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.25□□□□□ -0.77
SHMT1P1-201ENST00000419974 TIMM8BQ9Y5J9 83 aaPredicted RBP10.25□□□□□ -0.77
SHMT1P1-201ENST00000419974 U3KQK5 164 aa10.25□□□□□ -0.77
SHMT1P1-201ENST00000419974 IGHV3OR16-12A0A075B7B8 117 aa10.24□□□□□ -0.77
SHMT1P1-201ENST00000419974 C1orf196B1AJZ1 125 aa10.24□□□□□ -0.77
SHMT1P1-201ENST00000419974 K7EIL1 84 aa10.24□□□□□ -0.77
SHMT1P1-201ENST00000419974 M0R381 172 aa10.24□□□□□ -0.77
SHMT1P1-201ENST00000419974 HTN1P15515 57 aa10.24□□□□□ -0.77
SHMT1P1-201ENST00000419974 DPH3P1Q9H4G8 78 aa10.24□□□□□ -0.77
SHMT1P1-201ENST00000419974 EDA2RQ9HAV5 297 aa10.24□□□□□ -0.77
SHMT1P1-201ENST00000419974 PRM2P04554 102 aa10.23□□□□□ -0.77
SHMT1P1-201ENST00000419974 RAB4AP20338 218 aa10.23□□□□□ -0.77
SHMT1P1-201ENST00000419974 EVI2AP22794 236 aa10.23□□□□□ -0.77
SHMT1P1-201ENST00000419974 LINC00315P59091 139 aa10.23□□□□□ -0.77
SHMT1P1-201ENST00000419974 RAB4BP61018 213 aa10.23□□□□□ -0.77
SHMT1P1-201ENST00000419974 DEFB135Q30KP9 77 aa10.23□□□□□ -0.77
SHMT1P1-201ENST00000419974 ZFP2Q6ZN57 461 aa10.23□□□□□ -0.77
SHMT1P1-201ENST00000419974 OR11H2Q8NH07 326 aa10.23□□□□□ -0.77
SHMT1P1-201ENST00000419974 RNF185Q96GF1 192 aa10.23□□□□□ -0.77
SHMT1P1-201ENST00000419974 LAMTOR2Q9Y2Q5 125 aa10.23□□□□□ -0.77
SHMT1P1-201ENST00000419974 MUC21A0A0G2JKD1 596 aa10.22□□□□□ -0.77
SHMT1P1-201ENST00000419974 MUC21A0A140T8X8 626 aa10.22□□□□□ -0.77
SHMT1P1-201ENST00000419974 CRYGDP07320 174 aa10.22□□□□□ -0.77
SHMT1P1-201ENST00000419974 RAB5BP61020 215 aa10.22□□□□□ -0.77
SHMT1P1-201ENST00000419974 UFSP1Q6NVU6 142 aa10.22□□□□□ -0.77
SHMT1P1-201ENST00000419974 Q8NAQ8 132 aa10.22□□□□□ -0.77
SHMT1P1-201ENST00000419974 MRAP2Q96G30 205 aa10.22□□□□□ -0.77
SHMT1P1-201ENST00000419974 LYRM9A8MSI8 78 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms