RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 PAIP2Q9BPZ3 127 aaKnown RBP-1.13□□□□□ -2.59
RNU4-55P-201ENST00000410731 OR2H1Q9GZK4 316 aa-1.13□□□□□ -2.59
RNU4-55P-201ENST00000410731 PRNDQ9UKY0 176 aa-1.13□□□□□ -2.59
RNU4-55P-201ENST00000410731 PYCARDQ9ULZ3 195 aa-1.13□□□□□ -2.59
RNU4-55P-201ENST00000410731 ANK3Q12955 4377 aaKnown RBP-1.13□□□□□ -2.59
RNU4-55P-201ENST00000410731 DNAH11Q96DT5 4516 aa-1.13□□□□□ -2.59
RNU4-55P-201ENST00000410731 TRBV10-1A0A0K0K1A3 114 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 TMEM189A5PLL7 270 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 C5orf58C9J3I9 102 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 H7C1C5 153 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 APOA2P02652 100 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 APOC1P02654 83 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 LCN6P62502 163 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 GNG5P63218 68 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 FADDQ13158 208 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 AKIRIN2Q53H80 203 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 CLEC2BQ92478 149 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 MCEEQ96PE7 176 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 BATF3Q9NR55 127 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 ARMC1Q9NVT9 282 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 MPC1Q9Y5U8 109 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 SPCS1Q9Y6A9 102 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 GOLGA4Q13439 2230 aaKnown RBP-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 IQSEC2Q5JU85 1478 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 PIK3C2AO00443 1686 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 KIDINS220Q9ULH0 1771 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 PLXNA2O75051 1894 aa-1.14□□□□□ -2.59
RNU4-55P-201ENST00000410731 CD109Q6YHK3 1445 aa-1.15□□□□□ -2.59
RNU4-55P-201ENST00000410731 TSC2P49815 1807 aa-1.15□□□□□ -2.59
RNU4-55P-201ENST00000410731 TEP1Q99973 2627 aaKnown RBP-1.15□□□□□ -2.59
RNU4-55P-201ENST00000410731 TNRC18O15417 2968 aaPredicted RBP-1.15□□□□□ -2.59
RNU4-55P-201ENST00000410731 GOLGA3Q08378 1498 aa-1.15□□□□□ -2.59
RNU4-55P-201ENST00000410731 CAMSAP2Q08AD1 1489 aa-1.15□□□□□ -2.59
RNU4-55P-201ENST00000410731 TRBV7-1A0A0A6YYK4 115 aa-1.15□□□□□ -2.59
RNU4-55P-201ENST00000410731 TRBV10-3A0A0K0K1G6 114 aa-1.15□□□□□ -2.59
RNU4-55P-201ENST00000410731 G3V2T6 193 aa-1.15□□□□□ -2.59
RNU4-55P-201ENST00000410731 G3V318 75 aa-1.15□□□□□ -2.59
RNU4-55P-201ENST00000410731 UNQ5815/PRO19632Q6UWF5 114 aa-1.15□□□□□ -2.59
RNU4-55P-201ENST00000410731 BICRAQ9NZM4 1560 aa-1.16□□□□□ -2.59
RNU4-55P-201ENST00000410731 FXYD6-FXYD2A0A087WZ82 144 aa-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 LOC107984640A0A0U1RRK4 108 aa-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 IFITM5A6NNB3 132 aa-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 EDF1O60869 148 aaKnown RBP-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 OR2H2O95918 312 aa-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 GTF2A1P52655 376 aaPredicted RBP-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 ERVS71-1P61550 626 aa-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 AKR1C8PQ5T2L2 129 aa-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 NUP35Q8NFH5 326 aa-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 DIRC1Q969H9 104 aa-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 TAF9BQ9HBM6 251 aa-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 ARL2BPQ9Y2Y0 163 aa-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 AKAP13Q12802 2813 aa-1.16□□□□□ -2.6
RNU4-55P-201ENST00000410731 PCF11O94913 1555 aaKnown RBP-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 PRRC2CQ9Y520 2896 aaKnown RBP-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 TRGV1A0A0A0MS02 117 aa-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 APOC4-APOC2K7ER74 178 aa-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 PIN1P1O15428 100 aa-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 SAA1P0DJI8 122 aaPredicted RBP-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 HAMPP81172 84 aa-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 SLC48A1Q6P1K1 146 aa-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 C4orf33Q8N1A6 199 aa-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 SMIM7Q9BQ49 75 aa-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 RTL8AQ9BWD3 113 aa-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 SSR3Q9UNL2 185 aa-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 LYSTQ99698 3801 aa-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 KNL1Q8NG31 2342 aa-1.17□□□□□ -2.6
RNU4-55P-201ENST00000410731 LRP5O75197 1615 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 TCRBV3S1A0A5B6 114 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 TMEM210A6NLX4 147 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 KPNA4O00629 521 aaPredicted RBP-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 DEGS1O15121 323 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 MFSD11O43934 449 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 TNFP01375 233 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 TFF1P04155 84 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 TPT1P13693 172 aaKnown RBP-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 CCL3L1P16619 93 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 SPRR1BP22528 89 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 POLR2JP52435 117 aaKnown RBP-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 DCDP81605 110 aaKnown RBP-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 SSBP1Q04837 148 aaKnown RBP-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 RTL8BQ17RB0 113 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 NEK7Q8TDX7 302 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 SH3BGRL3Q9H299 93 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 FKBP11Q9NYL4 201 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 SCP2D1Q9UJQ7 156 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 PLXNB2O15031 1838 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 LAMA3Q16787 3333 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 ARAP1Q96P48 1450 aa-1.18□□□□□ -2.6
RNU4-55P-201ENST00000410731 LAMA1P25391 3075 aa-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 NIPBLQ6KC79 2804 aaeCLIP-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 DNHD1Q96M86 4753 aa-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 LOC107986453A0A1B0GWG9 222 aa-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 BCE1O60756 84 aa-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 IFNA21P01568 189 aa-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 ACACAQ13085 2346 aa-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 SPRR2FQ96RM1 72 aa-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 PBDC1Q9BVG4 233 aa-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 TP53AIP1Q9HCN2 124 aa-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 LYRM2Q9NU23 88 aaPredicted RBP-1.19□□□□□ -2.6
RNU4-55P-201ENST00000410731 IL20Q9NYY1 176 aa-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms