RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 F2Z2F3 143 aa12.15□□□□□ -0.46
SSB-202ENST00000409333 RNASE8Q8TDE3 154 aaKnown RBP12.15□□□□□ -0.46
SSB-202ENST00000409333 FAM210BQ96KR6 192 aa12.15□□□□□ -0.46
SSB-202ENST00000409333 RCHY1Q96PM5 261 aa12.15□□□□□ -0.46
SSB-202ENST00000409333 X6R8D5 127 aa12.15□□□□□ -0.46
SSB-202ENST00000409333 NACAE9PAV3 2078 aa12.15□□□□□ -0.46
SSB-202ENST00000409333 ZNF415Q09FC8 603 aa12.15□□□□□ -0.46
SSB-202ENST00000409333 Q6ZWC4 215 aa12.15□□□□□ -0.46
SSB-202ENST00000409333 TMEM263Q8WUH6 116 aaKnown RBP12.15□□□□□ -0.46
SSB-202ENST00000409333 CNFNQ9BYD5 112 aa12.15□□□□□ -0.46
SSB-202ENST00000409333 PHLDA3Q9Y5J5 127 aa12.15□□□□□ -0.46
SSB-202ENST00000409333 A0A1B0GXF2 115 aa12.14□□□□□ -0.47
SSB-202ENST00000409333 RRN3P1Q2M238 152 aa12.14□□□□□ -0.47
SSB-202ENST00000409333 DEFB121Q5J5C9 76 aa12.14□□□□□ -0.47
SSB-202ENST00000409333 BORCS7Q96B45 105 aa12.14□□□□□ -0.47
SSB-202ENST00000409333 RNF183Q96D59 192 aa12.14□□□□□ -0.47
SSB-202ENST00000409333 MSRB1Q9NZV6 116 aa12.14□□□□□ -0.47
SSB-202ENST00000409333 M0R381 172 aa12.13□□□□□ -0.47
SSB-202ENST00000409333 NTF3P20783 257 aa12.13□□□□□ -0.47
SSB-202ENST00000409333 CAMPP49913 170 aa12.13□□□□□ -0.47
SSB-202ENST00000409333 ATP5L2Q7Z4Y8 100 aa12.13□□□□□ -0.47
SSB-202ENST00000409333 HUWE1Q7Z6Z7 4374 aaKnown RBP12.13□□□□□ -0.47
SSB-202ENST00000409333 TWIST1Q15672 202 aa12.13□□□□□ -0.47
SSB-202ENST00000409333 SPANXN1Q5VSR9 72 aa12.13□□□□□ -0.47
SSB-202ENST00000409333 OR11H2Q8NH07 326 aa12.13□□□□□ -0.47
SSB-202ENST00000409333 C16orf74Q96GX8 76 aa12.13□□□□□ -0.47
SSB-202ENST00000409333 RETNQ9HD89 108 aa12.13□□□□□ -0.47
SSB-202ENST00000409333 PLAC8L1A1L4L8 177 aa12.12□□□□□ -0.47
SSB-202ENST00000409333 HBBP68871 147 aa12.12□□□□□ -0.47
SSB-202ENST00000409333 DMRTA1Q5VZB9 504 aa12.12□□□□□ -0.47
SSB-202ENST00000409333 IL17DQ8TAD2 202 aa12.12□□□□□ -0.47
SSB-202ENST00000409333 DNAH9Q9NYC9 4486 aa12.11□□□□□ -0.47
SSB-202ENST00000409333 RAB5AP20339 215 aa12.11□□□□□ -0.47
SSB-202ENST00000409333 CACNG7P62955 275 aa12.11□□□□□ -0.47
SSB-202ENST00000409333 RIGQ13278 110 aa12.11□□□□□ -0.47
SSB-202ENST00000409333 IGHV4-4A0A075B6R2 117 aa12.1□□□□□ -0.47
SSB-202ENST00000409333 NXPH4O95158 308 aa12.1□□□□□ -0.47
SSB-202ENST00000409333 ZNF493Q6ZR52 646 aa12.1□□□□□ -0.47
SSB-202ENST00000409333 SBSPONQ8IVN8 264 aa12.1□□□□□ -0.47
SSB-202ENST00000409333 OVOL2Q9BRP0 275 aa12.1□□□□□ -0.47
SSB-202ENST00000409333 SMIM9A6NGZ8 99 aa12.1□□□□□ -0.47
SSB-202ENST00000409333 SNURFLB1AK76 121 aa12.1□□□□□ -0.47
SSB-202ENST00000409333 RAB4BP61018 213 aa12.1□□□□□ -0.47
SSB-202ENST00000409333 WDR73Q6P4I2 378 aa12.1□□□□□ -0.47
SSB-202ENST00000409333 ZFP82Q8N141 532 aa12.1□□□□□ -0.47
SSB-202ENST00000409333 TENM3Q9P273 2699 aa12.1□□□□□ -0.47
SSB-202ENST00000409333 RPS10P46783 165 aaKnown RBP12.09□□□□□ -0.47
SSB-202ENST00000409333 ZNF876PQ49A33 203 aa12.09□□□□□ -0.47
SSB-202ENST00000409333 RASL11AQ6T310 242 aa12.09□□□□□ -0.47
SSB-202ENST00000409333 TMEM136Q6ZRR5 245 aa12.09□□□□□ -0.47
SSB-202ENST00000409333 MRAPQ8TCY5 172 aa12.09□□□□□ -0.47
SSB-202ENST00000409333 M0R2P5 195 aa12.08□□□□□ -0.48
SSB-202ENST00000409333 EMP1P54849 157 aa12.08□□□□□ -0.48
SSB-202ENST00000409333 SPXQ9BT56 116 aa12.08□□□□□ -0.48
SSB-202ENST00000409333 MRPL16Q9NX20 251 aaKnown RBP12.08□□□□□ -0.48
SSB-202ENST00000409333 TP53TG1Q9Y2A0 90 aa12.08□□□□□ -0.48
SSB-202ENST00000409333 A0A1B0GW15 77 aa12.07□□□□□ -0.48
SSB-202ENST00000409333 Q8NAQ8 132 aa12.07□□□□□ -0.48
SSB-202ENST00000409333 JPT2Q9H910 190 aa12.07□□□□□ -0.48
SSB-202ENST00000409333 NOP10Q9NPE3 64 aaKnown RBP12.07□□□□□ -0.48
SSB-202ENST00000409333 PRKDCP78527 4128 aaKnown RBP12.07□□□□□ -0.48
SSB-202ENST00000409333 IGHV4-28A0A0C4DH34 117 aa12.07□□□□□ -0.48
SSB-202ENST00000409333 DEFB4AO15263 64 aa12.07□□□□□ -0.48
SSB-202ENST00000409333 EVI2AP22794 236 aa12.07□□□□□ -0.48
SSB-202ENST00000409333 SYT8Q8NBV8 401 aa12.07□□□□□ -0.48
SSB-202ENST00000409333 GNB1LQ9BYB4 327 aa12.07□□□□□ -0.48
SSB-202ENST00000409333 MIFP14174 115 aa12.06□□□□□ -0.48
SSB-202ENST00000409333 GATD1Q8NB37 220 aa12.06□□□□□ -0.48
SSB-202ENST00000409333 TRGV1A0A0A0MS02 117 aa12.05□□□□□ -0.48
SSB-202ENST00000409333 S100A8P05109 93 aa12.05□□□□□ -0.48
SSB-202ENST00000409333 DAZ2Q13117 558 aaKnown RBP12.05□□□□□ -0.48
SSB-202ENST00000409333 Q6ZTI0 123 aa12.05□□□□□ -0.48
SSB-202ENST00000409333 FRZBQ92765 325 aa12.05□□□□□ -0.48
SSB-202ENST00000409333 TRAPPC1Q9Y5R8 145 aa12.05□□□□□ -0.48
SSB-202ENST00000409333 TRGC1P0CF51 173 aa12.05□□□□□ -0.48
SSB-202ENST00000409333 SLAQ13239 276 aa12.05□□□□□ -0.48
SSB-202ENST00000409333 COX19Q49B96 90 aa12.05□□□□□ -0.48
SSB-202ENST00000409333 C14orf178Q8N769 122 aaPredicted RBP12.05□□□□□ -0.48
SSB-202ENST00000409333 AP1S3Q96PC3 154 aa12.05□□□□□ -0.48
SSB-202ENST00000409333 TM2D3Q9BRN9 247 aa12.05□□□□□ -0.48
SSB-202ENST00000409333 TMEM191AQ9H0A3 160 aa12.05□□□□□ -0.48
SSB-202ENST00000409333 MRPL18Q9H0U6 180 aaKnown RBP12.05□□□□□ -0.48
SSB-202ENST00000409333 HLA-DQA1P01909 254 aa12.04□□□□□ -0.48
SSB-202ENST00000409333 TRGC2P03986 189 aa12.04□□□□□ -0.48
SSB-202ENST00000409333 FABP9Q0Z7S8 132 aa12.04□□□□□ -0.48
SSB-202ENST00000409333 AMN1Q8IY45 258 aa12.04□□□□□ -0.48
SSB-202ENST00000409333 RASL10AQ92737 203 aa12.04□□□□□ -0.48
SSB-202ENST00000409333 PTH2Q96A98 100 aa12.04□□□□□ -0.48
SSB-202ENST00000409333 MT-ND6P03923 174 aa12.03□□□□□ -0.48
SSB-202ENST00000409333 SPATA25Q9BR10 227 aa12.03□□□□□ -0.48
SSB-202ENST00000409333 SAMD10Q9BYL1 202 aa12.03□□□□□ -0.48
SSB-202ENST00000409333 A0A087WWL8 130 aa12.02□□□□□ -0.48
SSB-202ENST00000409333 LGALS9BQ3B8N2 356 aa12.02□□□□□ -0.48
SSB-202ENST00000409333 MEGF8Q7Z7M0 2845 aa12.02□□□□□ -0.49
SSB-202ENST00000409333 DEFA6Q01524 100 aa12.02□□□□□ -0.49
SSB-202ENST00000409333 PIK3CD-AS1Q5SR53 167 aa12.02□□□□□ -0.49
SSB-202ENST00000409333 FAM74A4Q5TZK3 123 aa12.02□□□□□ -0.49
SSB-202ENST00000409333 FAM104BQ5XKR9 115 aa12.02□□□□□ -0.49
SSB-202ENST00000409333 SMIM15Q7Z3B0 74 aa12.02□□□□□ -0.49
SSB-202ENST00000409333 RNF185Q96GF1 192 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms