RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 PF4V1P10720 104 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 LY6DQ14210 128 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 FOXI2Q6ZQN5 318 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 IGHV4-61A0A0C4DH41 118 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 K7EMT4 169 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 IGLV1-40P01703 118 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 LY6EQ16553 131 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 SELENOKQ9Y6D0 94 aa8.09□□□□□ -1.11
CLIP4-204ENST00000404424 SPTBN1Q01082 2364 aaKnown RBP8.09□□□□□ -1.11
CLIP4-204ENST00000404424 A0A1B0GWB2 263 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 KLLNB2CW77 178 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 F6UB75 175 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 H3BUX3 64 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 ID1P41134 155 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 C10orf105Q8TEF2 133 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 ZNF479Q96JC4 524 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 COL6A6A6NMZ7 2263 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 PRSS29PA6NIE9 313 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 F8W1H4 67 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 SPRY2O43597 315 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 IGHV4-38-2P0DP08 117 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 DEFB1P60022 68 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 PAPPA-AS1Q5QFB9 102 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 KIF25-AS1Q9Y6Z4 181 aa8.08□□□□□ -1.12
CLIP4-204ENST00000404424 FAM159AQ6UWV7 190 aa8.07□□□□□ -1.12
CLIP4-204ENST00000404424 ZNF580Q9UK33 172 aa8.07□□□□□ -1.12
CLIP4-204ENST00000404424 CYSLTR1Q9Y271 337 aa8.07□□□□□ -1.12
CLIP4-204ENST00000404424 HIVEP3Q5T1R4 2406 aa8.07□□□□□ -1.12
CLIP4-204ENST00000404424 LINC00315P59091 139 aa8.07□□□□□ -1.12
CLIP4-204ENST00000404424 IGKV3-7A0A075B6H7 116 aa8.06□□□□□ -1.12
CLIP4-204ENST00000404424 LGALS1P09382 135 aaKnown RBP8.06□□□□□ -1.12
CLIP4-204ENST00000404424 BLCAPP62952 87 aa8.06□□□□□ -1.12
CLIP4-204ENST00000404424 CLEC2AQ6UVW9 174 aa8.06□□□□□ -1.12
CLIP4-204ENST00000404424 POLR2KP53803 58 aaKnown RBP8.06□□□□□ -1.12
CLIP4-204ENST00000404424 CFHR3Q02985 330 aa8.06□□□□□ -1.12
CLIP4-204ENST00000404424 SCGB2A2Q13296 93 aa8.06□□□□□ -1.12
CLIP4-204ENST00000404424 RRN3P1Q2M238 152 aa8.06□□□□□ -1.12
CLIP4-204ENST00000404424 CCL19Q99731 98 aa8.06□□□□□ -1.12
CLIP4-204ENST00000404424 PRADC1Q9BSG0 188 aa8.06□□□□□ -1.12
CLIP4-204ENST00000404424 ATRXP46100 2492 aa8.05□□□□□ -1.12
CLIP4-204ENST00000404424 VCYO14598 125 aa8.05□□□□□ -1.12
CLIP4-204ENST00000404424 GNLYP22749 145 aa8.05□□□□□ -1.12
CLIP4-204ENST00000404424 RIPPLY3P57055 190 aa8.05□□□□□ -1.12
CLIP4-204ENST00000404424 RPL24P83731 157 aaKnown RBP8.05□□□□□ -1.12
CLIP4-204ENST00000404424 DCANP1Q8TF63 244 aa8.05□□□□□ -1.12
CLIP4-204ENST00000404424 PRORYQ9H606 182 aa8.05□□□□□ -1.12
CLIP4-204ENST00000404424 IGF2RP11717 2491 aa8.05□□□□□ -1.12
CLIP4-204ENST00000404424 TMEM238LA0A1B0GVL6 79 aa8.05□□□□□ -1.12
CLIP4-204ENST00000404424 A6NJY4 79 aa8.05□□□□□ -1.12
CLIP4-204ENST00000404424 HOXA3O43365 443 aaPredicted RBP8.05□□□□□ -1.12
CLIP4-204ENST00000404424 TMEM141Q96I45 108 aa8.05□□□□□ -1.12
CLIP4-204ENST00000404424 ODF3Q96PU9 254 aa8.05□□□□□ -1.12
CLIP4-204ENST00000404424 KIR2DL4Q99706 377 aa8.05□□□□□ -1.12
CLIP4-204ENST00000404424 DUSP14O95147 198 aaKnown RBP8.04□□□□□ -1.12
CLIP4-204ENST00000404424 CRYGDP07320 174 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 MSMBP08118 114 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 TIMM17AQ99595 171 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 AGRNO00468 2067 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 TEX48A0A1B0GUV7 120 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 IGIPA6NJ69 53 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 ZNF815PA8K554 130 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 COX6B1P14854 86 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 HERVK_113P61574 105 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 SUMO4Q6EEV6 95 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 ZFP2Q6ZN57 461 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 Q6ZS46 218 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 TP53TG1Q9Y2A0 90 aa8.04□□□□□ -1.12
CLIP4-204ENST00000404424 TRBV6-5A0A0K0K1A5 114 aa8.03□□□□□ -1.12
CLIP4-204ENST00000404424 J3QR89 54 aa8.03□□□□□ -1.12
CLIP4-204ENST00000404424 PMVKQ15126 192 aa8.03□□□□□ -1.12
CLIP4-204ENST00000404424 SCGB1D4Q6XE38 83 aa8.03□□□□□ -1.12
CLIP4-204ENST00000404424 LCNL1Q6ZST4 164 aa8.03□□□□□ -1.12
CLIP4-204ENST00000404424 ABCA2Q9BZC7 2435 aa8.03□□□□□ -1.12
CLIP4-204ENST00000404424 ZFHX3Q15911 3703 aa8.03□□□□□ -1.12
CLIP4-204ENST00000404424 LGALS9O00182 355 aa8.03□□□□□ -1.12
CLIP4-204ENST00000404424 TSHBP01222 138 aa8.03□□□□□ -1.12
CLIP4-204ENST00000404424 CD7P09564 240 aa8.03□□□□□ -1.12
CLIP4-204ENST00000404424 SRD5A1P18405 259 aa8.03□□□□□ -1.12
CLIP4-204ENST00000404424 IGLV4-69A0A075B6H9 119 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 IGHV4-30-2A0A087WSY4 118 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 TRBV27A0A0K0K1C4 114 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 H3BMG7 143 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 ATP5J2P56134 94 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 MUC4Q99102 2169 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 TMEM89A2RUT3 159 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 SDHAF1A6NFY7 115 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 F5H697 171 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 PSMB8P28062 276 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 GAGE13Q4V321 117 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 SYT8Q8NBV8 401 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 C9orf85Q96MD7 179 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 JPT2Q9H910 190 aa8.02□□□□□ -1.13
CLIP4-204ENST00000404424 SPANXB1Q9NS25 103 aaPredicted RBP8.02□□□□□ -1.13
CLIP4-204ENST00000404424 TRAV12-3A0A0B4J271 114 aa8.01□□□□□ -1.13
CLIP4-204ENST00000404424 C11orf86A6NJI1 115 aa8.01□□□□□ -1.13
CLIP4-204ENST00000404424 B4DSR2 109 aa8.01□□□□□ -1.13
CLIP4-204ENST00000404424 GATA3P23771 443 aa8.01□□□□□ -1.13
CLIP4-204ENST00000404424 SNRPD3P62318 126 aaKnown RBP8.01□□□□□ -1.13
CLIP4-204ENST00000404424 SRSF9Q13242 221 aaKnown RBP eCLIP8.01□□□□□ -1.13
CLIP4-204ENST00000404424 WFDC2Q14508 124 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms