RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 GTSF1Q8WW33 167 aa6.46□□□□□ -1.38
SPTLC3-201ENST00000399002 C2orf70A6NJV1 201 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 RPL18AQ02543 176 aaKnown RBP6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 DENND4AQ7Z401 1863 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 CCL18P55774 89 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 MRAPQ8TCY5 172 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 SPATA25Q9BR10 227 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 TMEM256-PLSCR3K7ERE1 68 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 LRRC75A-AS1Q8N1F1 130 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 VSIG2Q96IQ7 327 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 SIRPDQ9H106 197 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 IGKV1OR2-108A0A075B7D4 117 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 FREM3P0C091 2139 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 IGLV1-47P01700 117 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 SLURP1P55000 103 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 Q8N1Y9 231 aa6.45□□□□□ -1.38
SPTLC3-201ENST00000399002 PDE4DIPQ5VU43 2346 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 P0C879 139 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 PSMB8P28062 276 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 RNASE13Q5GAN3 156 aaKnown RBP6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 TMEM263Q8WUH6 116 aaKnown RBP6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 LTBP2Q14767 1821 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 J3KT08 172 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 DKK4Q9UBT3 224 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 LGALS9O00182 355 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 SPRNQ5BIV9 151 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 RITA1Q96K30 269 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 F5P12259 2224 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 A4D1N5 150 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 A6NDX4 124 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 RBM3P98179 157 aaKnown RBP6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 Q6ZQT7 251 aa6.44□□□□□ -1.38
SPTLC3-201ENST00000399002 IGHV4OR15-8A0A075B7B6 117 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 A0A087WW49 117 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 IGHV4-61A0A0C4DH41 118 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 ODF3BA8MYP8 253 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 PLA2G2EQ9NZK7 142 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 IGHV4-38-2P0DP08 117 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 DIRC1Q969H9 104 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 FOXI1Q12951 378 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 C14orf177Q52M58 125 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 HHLA3Q9XRX5 114 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 OBSL1O75147 1896 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 A0A1B0GXF2 115 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 NDUFS5O43920 106 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 ODF1Q14990 250 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 ANKRD39Q53RE8 183 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 GATA1P15976 413 aaPredicted RBP6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 CLPSL2Q6UWE3 100 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 AMTNQ6UX39 209 aa6.43□□□□□ -1.38
SPTLC3-201ENST00000399002 MIAQ16674 131 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 SPRY4Q9C004 299 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 A0A0J9YY99 117 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 TAX1BP3O14907 124 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 ADORA2A-AS1P86434 159 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 HIST2H2BCQ6DN03 193 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 IL17DQ8TAD2 202 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 ATP5EP2Q5VTU8 51 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 APRG1Q8IVJ8 170 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 TMEM61Q8N0U2 210 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 MAPK1IP1LQ8NDC0 245 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 IGHV4-30-2A0A087WSY4 118 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 G3V4G9 280 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 NREPQ16612 68 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 Q8N7P7 452 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 A0A0J9YXV3 536 aa6.42□□□□□ -1.38
SPTLC3-201ENST00000399002 A0A096LPF7 62 aa6.41□□□□□ -1.38
SPTLC3-201ENST00000399002 CGB7P0DN87 165 aa6.41□□□□□ -1.38
SPTLC3-201ENST00000399002 KIAA1549LQ6ZVL6 1849 aa6.41□□□□□ -1.38
SPTLC3-201ENST00000399002 CHKB-CPT1BH3BT56 60 aa6.41□□□□□ -1.38
SPTLC3-201ENST00000399002 MYO7AQ13402 2215 aa6.41□□□□□ -1.38
SPTLC3-201ENST00000399002 A0A0J9YX75 114 aa6.41□□□□□ -1.38
SPTLC3-201ENST00000399002 A0A0J9YXY3 114 aa6.41□□□□□ -1.38
SPTLC3-201ENST00000399002 SMIM9A6NGZ8 99 aa6.41□□□□□ -1.38
SPTLC3-201ENST00000399002 C20orf203Q8NBC4 194 aa6.41□□□□□ -1.38
SPTLC3-201ENST00000399002 SPANXB1Q9NS25 103 aaPredicted RBP6.41□□□□□ -1.38
SPTLC3-201ENST00000399002 KLK5Q9Y337 293 aaPredicted RBP6.41□□□□□ -1.38
SPTLC3-201ENST00000399002 A0A1B0GX51 115 aa6.4□□□□□ -1.38
SPTLC3-201ENST00000399002 C5orf38Q86SI9 138 aa6.4□□□□□ -1.38
SPTLC3-201ENST00000399002 NDUFA11Q86Y39 141 aa6.4□□□□□ -1.38
SPTLC3-201ENST00000399002 SDK1Q7Z5N4 2213 aa6.4□□□□□ -1.38
SPTLC3-201ENST00000399002 DEFB105AQ8NG35 78 aa6.4□□□□□ -1.38
SPTLC3-201ENST00000399002 NCKAP5O14513 1909 aa6.4□□□□□ -1.38
SPTLC3-201ENST00000399002 TNFRSF13BO14836 293 aaPredicted RBP6.4□□□□□ -1.39
SPTLC3-201ENST00000399002 WT1P19544 449 aaPredicted RBP6.4□□□□□ -1.39
SPTLC3-201ENST00000399002 MDC1Q14676 2089 aaKnown RBP6.4□□□□□ -1.39
SPTLC3-201ENST00000399002 NUPR1O60356 82 aa6.4□□□□□ -1.39
SPTLC3-201ENST00000399002 FXYD2P54710 66 aa6.4□□□□□ -1.39
SPTLC3-201ENST00000399002 ASPHD1Q5U4P2 390 aa6.4□□□□□ -1.39
SPTLC3-201ENST00000399002 TNRC6AQ8NDV7 1962 aaKnown RBP6.4□□□□□ -1.39
SPTLC3-201ENST00000399002 LOXL1Q08397 574 aaPredicted RBP6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 LINC00173Q6ZV60 143 aa6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 NFE4Q86UQ8 179 aa6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 U3KQK5 164 aa6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 NCR3O14931 201 aa6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 LINC00643Q86TS7 51 aa6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 COL4A3Q01955 1670 aa6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 CLPSL1A2RUU4 121 aa6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 LYRM9A8MSI8 78 aa6.39□□□□□ -1.39
SPTLC3-201ENST00000399002 PRAC2D3DTV9 90 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms