RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 FAM19A4Q96LR4 140 aa10.5□□□□□ -0.73
NUP98-204ENST00000397004 RAB9AP51151 201 aa10.49□□□□□ -0.73
NUP98-204ENST00000397004 TAL2Q16559 108 aa10.49□□□□□ -0.73
NUP98-204ENST00000397004 PSMG4Q5JS54 123 aa10.49□□□□□ -0.73
NUP98-204ENST00000397004 LMO4P61968 165 aa10.49□□□□□ -0.73
NUP98-204ENST00000397004 SAMD13Q5VXD3 122 aa10.49□□□□□ -0.73
NUP98-204ENST00000397004 C2orf66Q6UXQ4 117 aa10.49□□□□□ -0.73
NUP98-204ENST00000397004 ZFP2Q6ZN57 461 aa10.49□□□□□ -0.73
NUP98-204ENST00000397004 MRAP2Q96G30 205 aa10.49□□□□□ -0.73
NUP98-204ENST00000397004 PRADC1Q9BSG0 188 aa10.49□□□□□ -0.73
NUP98-204ENST00000397004 DUSP14O95147 198 aaKnown RBP10.49□□□□□ -0.73
NUP98-204ENST00000397004 EEF1AKMT3Q96AZ1 226 aa10.49□□□□□ -0.73
NUP98-204ENST00000397004 SPTBN4Q9H254 2564 aa10.48□□□□□ -0.73
NUP98-204ENST00000397004 IGLV4-69A0A075B6H9 119 aa10.48□□□□□ -0.73
NUP98-204ENST00000397004 NFE4Q86UQ8 179 aa10.48□□□□□ -0.73
NUP98-204ENST00000397004 KIF25-AS1Q9Y6Z4 181 aa10.48□□□□□ -0.73
NUP98-204ENST00000397004 TRBV7-1A0A0A6YYK4 115 aa10.48□□□□□ -0.73
NUP98-204ENST00000397004 CD300EQ496F6 205 aaPredicted RBP10.48□□□□□ -0.73
NUP98-204ENST00000397004 Q6ZS46 218 aa10.48□□□□□ -0.73
NUP98-204ENST00000397004 UTP20O75691 2785 aaKnown RBP10.48□□□□□ -0.73
NUP98-204ENST00000397004 TSPEAR-AS2P59090 65 aa10.47□□□□□ -0.73
NUP98-204ENST00000397004 C20orf78Q9BR46 151 aa10.47□□□□□ -0.73
NUP98-204ENST00000397004 SPATA25Q9BR10 227 aa10.47□□□□□ -0.73
NUP98-204ENST00000397004 BPESC1Q9GZL8 116 aa10.47□□□□□ -0.73
NUP98-204ENST00000397004 IGKV3-7A0A075B6H7 116 aa10.47□□□□□ -0.73
NUP98-204ENST00000397004 SLC25A16P16260 332 aa10.47□□□□□ -0.73
NUP98-204ENST00000397004 HIF1ANQ9NWT6 349 aa10.47□□□□□ -0.73
NUP98-204ENST00000397004 OR11H12B2RN74 326 aa10.46□□□□□ -0.73
NUP98-204ENST00000397004 SCGB2A1O75556 95 aa10.46□□□□□ -0.73
NUP98-204ENST00000397004 OR11H1Q8NG94 326 aa10.46□□□□□ -0.73
NUP98-204ENST00000397004 OR11H2Q8NH07 326 aa10.46□□□□□ -0.73
NUP98-204ENST00000397004 WFDC12Q8WWY7 111 aa10.46□□□□□ -0.73
NUP98-204ENST00000397004 CHD8Q9HCK8 2581 aa10.46□□□□□ -0.73
NUP98-204ENST00000397004 C11orf86A6NJI1 115 aa10.46□□□□□ -0.74
NUP98-204ENST00000397004 LINC01619G3V211 115 aa10.46□□□□□ -0.74
NUP98-204ENST00000397004 CD7P09564 240 aa10.46□□□□□ -0.74
NUP98-204ENST00000397004 RNASE4P34096 147 aaKnown RBP10.46□□□□□ -0.74
NUP98-204ENST00000397004 RPL39P62891 51 aaKnown RBP10.46□□□□□ -0.74
NUP98-204ENST00000397004 GAGE13Q4V321 117 aa10.46□□□□□ -0.74
NUP98-204ENST00000397004 PGPEP1Q9NXJ5 209 aa10.46□□□□□ -0.74
NUP98-204ENST00000397004 UBE2D1P51668 147 aa10.45□□□□□ -0.74
NUP98-204ENST00000397004 SIGMAR1Q99720 223 aa10.45□□□□□ -0.74
NUP98-204ENST00000397004 ZANQ9Y493 2812 aa10.45□□□□□ -0.74
NUP98-204ENST00000397004 MGPP08493 103 aa10.45□□□□□ -0.74
NUP98-204ENST00000397004 PTH2Q96A98 100 aa10.45□□□□□ -0.74
NUP98-204ENST00000397004 NCOR2Q9Y618 2525 aa10.45□□□□□ -0.74
NUP98-204ENST00000397004 NPFFO15130 113 aa10.45□□□□□ -0.74
NUP98-204ENST00000397004 EIF4EBP3O60516 100 aaPredicted RBP10.45□□□□□ -0.74
NUP98-204ENST00000397004 SRD5A1P18405 259 aa10.45□□□□□ -0.74
NUP98-204ENST00000397004 DPH3P1Q9H4G8 78 aa10.45□□□□□ -0.74
NUP98-204ENST00000397004 LINC01549A6NIU2 74 aa10.44□□□□□ -0.74
NUP98-204ENST00000397004 TSPAN13O95857 204 aa10.44□□□□□ -0.74
NUP98-204ENST00000397004 ORMDL2Q53FV1 153 aa10.44□□□□□ -0.74
NUP98-204ENST00000397004 BRD3OSQ6XYD6 125 aa10.44□□□□□ -0.74
NUP98-204ENST00000397004 AKAP9Q99996 3911 aa10.44□□□□□ -0.74
NUP98-204ENST00000397004 IGIPA6NJ69 53 aa10.44□□□□□ -0.74
NUP98-204ENST00000397004 IGHV3-11P01762 117 aa10.44□□□□□ -0.74
NUP98-204ENST00000397004 CFAP126Q5VTH2 177 aa10.44□□□□□ -0.74
NUP98-204ENST00000397004 TRAV41A0A0B4J266 112 aa10.44□□□□□ -0.74
NUP98-204ENST00000397004 AMELXQ99217 191 aa10.44□□□□□ -0.74
NUP98-204ENST00000397004 ZNF815PA8K554 130 aa10.43□□□□□ -0.74
NUP98-204ENST00000397004 APRG1Q8IVJ8 170 aa10.43□□□□□ -0.74
NUP98-204ENST00000397004 POM121L12Q8N7R1 296 aa10.43□□□□□ -0.74
NUP98-204ENST00000397004 ARL3P36405 182 aa10.43□□□□□ -0.74
NUP98-204ENST00000397004 C9orf139Q6ZV77 190 aa10.43□□□□□ -0.74
NUP98-204ENST00000397004 ZNRF2Q8NHG8 242 aa10.43□□□□□ -0.74
NUP98-204ENST00000397004 CDIP1Q9H305 208 aa10.43□□□□□ -0.74
NUP98-204ENST00000397004 PHLDA3Q9Y5J5 127 aa10.43□□□□□ -0.74
NUP98-204ENST00000397004 HOXA3O43365 443 aaPredicted RBP10.43□□□□□ -0.74
NUP98-204ENST00000397004 CLEC2AQ6UVW9 174 aa10.42□□□□□ -0.74
NUP98-204ENST00000397004 LENEPQ9Y5L5 61 aa10.42□□□□□ -0.74
NUP98-204ENST00000397004 LINC00477Q96M19 166 aa10.42□□□□□ -0.74
NUP98-204ENST00000397004 TRAV21A0A0B4J279 112 aa10.42□□□□□ -0.74
NUP98-204ENST00000397004 A0A0J9YY99 117 aa10.41□□□□□ -0.74
NUP98-204ENST00000397004 S100A4P26447 101 aaKnown RBP10.41□□□□□ -0.74
NUP98-204ENST00000397004 ASIPP42127 132 aa10.41□□□□□ -0.74
NUP98-204ENST00000397004 OPRPNQ99935 248 aaPredicted RBP10.41□□□□□ -0.74
NUP98-204ENST00000397004 CARD19Q96LW7 228 aa10.41□□□□□ -0.74
NUP98-204ENST00000397004 A0A087WWL8 130 aa10.41□□□□□ -0.74
NUP98-204ENST00000397004 POLR2KP53803 58 aaKnown RBP10.41□□□□□ -0.74
NUP98-204ENST00000397004 TP53TG1Q9Y2A0 90 aa10.41□□□□□ -0.74
NUP98-204ENST00000397004 NXPH4O95158 308 aa10.4□□□□□ -0.74
NUP98-204ENST00000397004 UBE2D3P61077 147 aa10.4□□□□□ -0.74
NUP98-204ENST00000397004 UBE2D2P62837 147 aa10.4□□□□□ -0.74
NUP98-204ENST00000397004 MRPL16Q9NX20 251 aaKnown RBP10.4□□□□□ -0.74
NUP98-204ENST00000397004 SORL1Q92673 2214 aa10.4□□□□□ -0.74
NUP98-204ENST00000397004 BLCAPP62952 87 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 FOXI1Q12951 378 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 LY6DQ14210 128 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 SUMO4Q6EEV6 95 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 UBTD1Q9HAC8 227 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 CACNA1AO00555 2505 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 NDUFS8O00217 210 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 OR10J6PQ8NGY7 276 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 CFC1BP0CG36 223 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 CFC1P0CG37 223 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 CRIP2P52943 208 aaPredicted RBP10.39□□□□□ -0.75
NUP98-204ENST00000397004 NDUFA11Q86Y39 141 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 MXRA5Q9NR99 2828 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 SPG11Q96JI7 2443 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms