RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PRR9Q5T870 116 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 GFI1BQ5VTD9 330 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 KCNIP4Q6PIL6 250 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 ATRAIDQ6UW56 229 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 OR2D3Q8NGH3 330 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 C20orf144Q9BQM9 153 aa7.37□□□□□ -1.23
NEDD8-202ENST00000396828 A8MWL6 223 aa7.36□□□□□ -1.23
NEDD8-202ENST00000396828 RTL8CO15255 209 aa7.36□□□□□ -1.23
NEDD8-202ENST00000396828 KIR3DS1Q14943 382 aa7.36□□□□□ -1.23
NEDD8-202ENST00000396828 CT83Q5H943 113 aa7.36□□□□□ -1.23
NEDD8-202ENST00000396828 FAM159AQ6UWV7 190 aa7.36□□□□□ -1.23
NEDD8-202ENST00000396828 KCNS1Q96KK3 526 aa7.36□□□□□ -1.23
NEDD8-202ENST00000396828 IMMP2LQ96T52 175 aa7.36□□□□□ -1.23
NEDD8-202ENST00000396828 SMCO4Q9NRQ5 59 aa7.36□□□□□ -1.23
NEDD8-202ENST00000396828 NAGKQ9UJ70 344 aa7.36□□□□□ -1.23
NEDD8-202ENST00000396828 V9GYV3 84 aa7.36□□□□□ -1.23
NEDD8-202ENST00000396828 CRXO43186 299 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-202ENST00000396828 ZNF324O75467 553 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-202ENST00000396828 ZNF705AQ6ZN79 300 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-202ENST00000396828 TMEM256Q8N2U0 113 aa7.35□□□□□ -1.23
NEDD8-202ENST00000396828 TSKUQ8WUA8 353 aa7.35□□□□□ -1.23
NEDD8-202ENST00000396828 TMEM208Q9BTX3 173 aa7.35□□□□□ -1.23
NEDD8-202ENST00000396828 IL36BQ9NZH7 164 aa7.35□□□□□ -1.23
NEDD8-202ENST00000396828 ABCA13Q86UQ4 5058 aa7.35□□□□□ -1.23
NEDD8-202ENST00000396828 LRP1BQ9NZR2 4599 aa7.34□□□□□ -1.23
NEDD8-202ENST00000396828 TMSB15BA0A087X1C1 80 aa7.34□□□□□ -1.23
NEDD8-202ENST00000396828 FAM231BA6NCW3 169 aa7.34□□□□□ -1.23
NEDD8-202ENST00000396828 EMP1P54849 157 aa7.34□□□□□ -1.23
NEDD8-202ENST00000396828 MUC21Q5SSG8 566 aa7.34□□□□□ -1.23
NEDD8-202ENST00000396828 POM121L12Q8N7R1 296 aa7.34□□□□□ -1.23
NEDD8-202ENST00000396828 LINC01587Q99440 93 aa7.34□□□□□ -1.23
NEDD8-202ENST00000396828 GFRA4Q9GZZ7 299 aa7.34□□□□□ -1.23
NEDD8-202ENST00000396828 NAT8BQ9UHF3 227 aa7.34□□□□□ -1.23
NEDD8-202ENST00000396828 GOLT1BQ9Y3E0 138 aa7.34□□□□□ -1.23
NEDD8-202ENST00000396828 IGHV3OR16-12A0A075B7B8 117 aa7.33□□□□□ -1.24
NEDD8-202ENST00000396828 IGHV1OR15-1A0A075B7D0 117 aa7.33□□□□□ -1.24
NEDD8-202ENST00000396828 IGKV3D-20A0A0C4DH25 116 aa7.33□□□□□ -1.24
NEDD8-202ENST00000396828 SMIM27A0A1W2PRY6 76 aa7.33□□□□□ -1.24
NEDD8-202ENST00000396828 SCO1O75880 301 aa7.33□□□□□ -1.24
NEDD8-202ENST00000396828 ASIPP42127 132 aa7.33□□□□□ -1.24
NEDD8-202ENST00000396828 RPL19P84098 196 aaKnown RBP7.33□□□□□ -1.24
NEDD8-202ENST00000396828 ANXA2RQ3ZCQ2 193 aa7.33□□□□□ -1.24
NEDD8-202ENST00000396828 TMEM88Q6PEY1 159 aa7.33□□□□□ -1.24
NEDD8-202ENST00000396828 BORCS7Q96B45 105 aa7.33□□□□□ -1.24
NEDD8-202ENST00000396828 BTF3L4Q96K17 158 aa7.33□□□□□ -1.24
NEDD8-202ENST00000396828 PYGO2Q9BRQ0 406 aa7.33□□□□□ -1.24
NEDD8-202ENST00000396828 URGCP-MRPS24S4R325 110 aa7.33□□□□□ -1.24
NEDD8-202ENST00000396828 TRGV11A0A075B6L2 103 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 TRAV9-1A0A075B6T8 112 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 A0A1W2PPQ1 181 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 CBY3A6NI87 242 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 PRSS29PA6NIE9 313 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 PRM2P04554 102 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 CXCL1P09341 107 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 S100A4P26447 101 aaKnown RBP7.32□□□□□ -1.24
NEDD8-202ENST00000396828 TCL1AP56279 114 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 TDRG1Q3Y452 100 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 Q6ZQT7 251 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 LINC00336Q6ZUF6 198 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 CBLN2Q8IUK8 224 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 NEU1Q99519 415 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 LINC00467Q9BRT7 94 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 NDUFAF3Q9BU61 184 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 C11orf21Q9P2W6 132 aa7.32□□□□□ -1.24
NEDD8-202ENST00000396828 IGLV2-18A0A075B6J9 118 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 GRIFINA4D1Z8 144 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 HIGD1CA8MV81 97 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 F2Z2F3 143 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 P0DMU3 169 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 FAM231AP0DMU4 169 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 FAM231CP0DMU5 169 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 GZMBP10144 247 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 HTN1P15515 57 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 FOXA3P55318 350 aaPredicted RBP7.31□□□□□ -1.24
NEDD8-202ENST00000396828 FAM3BP58499 235 aaPredicted RBP7.31□□□□□ -1.24
NEDD8-202ENST00000396828 C1orf158Q8N1D5 194 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 FER1L6-AS1Q8NA97 138 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 MUC4Q99102 2169 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 TPPP3Q9BW30 176 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 DKK2Q9UBU2 259 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 NACAE9PAV3 2078 aa7.31□□□□□ -1.24
NEDD8-202ENST00000396828 GNRH2O43555 120 aa7.3□□□□□ -1.24
NEDD8-202ENST00000396828 TYMSP04818 313 aa7.3□□□□□ -1.24
NEDD8-202ENST00000396828 SPART-AS1P0CW21 52 aa7.3□□□□□ -1.24
NEDD8-202ENST00000396828 ELOBQ15370 118 aa7.3□□□□□ -1.24
NEDD8-202ENST00000396828 DNLZQ5SXM8 178 aa7.3□□□□□ -1.24
NEDD8-202ENST00000396828 FAM222AQ5U5X8 452 aa7.3□□□□□ -1.24
NEDD8-202ENST00000396828 Q6ZR54 194 aa7.3□□□□□ -1.24
NEDD8-202ENST00000396828 NUP35Q8NFH5 326 aa7.3□□□□□ -1.24
NEDD8-202ENST00000396828 GTSF1Q8WW33 167 aa7.3□□□□□ -1.24
NEDD8-202ENST00000396828 PGLYRP4Q96LB8 373 aa7.3□□□□□ -1.24
NEDD8-202ENST00000396828 KRTAP4-5Q9BYR2 181 aa7.3□□□□□ -1.24
NEDD8-202ENST00000396828 APOBP04114 4563 aaKnown RBP7.3□□□□□ -1.24
NEDD8-202ENST00000396828 OR5AL1P0C617 328 aa7.29□□□□□ -1.24
NEDD8-202ENST00000396828 IGLC6P0CF74 106 aa7.29□□□□□ -1.24
NEDD8-202ENST00000396828 MED14OSP0DP75 135 aa7.29□□□□□ -1.24
NEDD8-202ENST00000396828 HTN3P15516 51 aa7.29□□□□□ -1.24
NEDD8-202ENST00000396828 CTRLP40313 264 aa7.29□□□□□ -1.24
NEDD8-202ENST00000396828 ZNF415Q09FC8 603 aa7.29□□□□□ -1.24
NEDD8-202ENST00000396828 LGALS9BQ3B8N2 356 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms