RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 ZNF418Q8TF45 676 aaPredicted RBP10.73□□□□□ -0.69
CCHCR1-203ENST00000396268 PTH2Q96A98 100 aa10.73□□□□□ -0.69
CCHCR1-203ENST00000396268 EEF1AKMT3Q96AZ1 226 aa10.73□□□□□ -0.69
CCHCR1-203ENST00000396268 LINC01546A6NGU7 62 aa10.72□□□□□ -0.69
CCHCR1-203ENST00000396268 J3QR89 54 aa10.72□□□□□ -0.69
CCHCR1-203ENST00000396268 IGLV2-18A0A075B6J9 118 aa10.72□□□□□ -0.69
CCHCR1-203ENST00000396268 IGHV7-4-1A0A0J9YVY3 117 aa10.72□□□□□ -0.69
CCHCR1-203ENST00000396268 GLMPQ8WWB7 406 aa10.72□□□□□ -0.69
CCHCR1-203ENST00000396268 SMPXQ9UHP9 88 aa10.72□□□□□ -0.69
CCHCR1-203ENST00000396268 LOC107984156A0A0G2JMH3 177 aa10.71□□□□□ -0.69
CCHCR1-203ENST00000396268 KRTAP10-9P60411 292 aa10.71□□□□□ -0.69
CCHCR1-203ENST00000396268 TMEM219Q86XT9 240 aa10.71□□□□□ -0.69
CCHCR1-203ENST00000396268 ARL17AQ8IVW1 177 aa10.71□□□□□ -0.69
CCHCR1-203ENST00000396268 PIFOQ8TCI5 191 aa10.71□□□□□ -0.69
CCHCR1-203ENST00000396268 IGHV4-61A0A0C4DH41 118 aa10.71□□□□□ -0.69
CCHCR1-203ENST00000396268 UBE2E1P51965 193 aa10.71□□□□□ -0.69
CCHCR1-203ENST00000396268 PSMG4Q5JS54 123 aa10.71□□□□□ -0.69
CCHCR1-203ENST00000396268 NRACQ8N912 160 aa10.71□□□□□ -0.69
CCHCR1-203ENST00000396268 F8W1H4 67 aa10.71□□□□□ -0.7
CCHCR1-203ENST00000396268 ATP5J2P56134 94 aa10.71□□□□□ -0.7
CCHCR1-203ENST00000396268 HIF1ANQ9NWT6 349 aa10.71□□□□□ -0.7
CCHCR1-203ENST00000396268 HIGD1BQ9P298 99 aa10.71□□□□□ -0.7
CCHCR1-203ENST00000396268 IGHV4-30-2A0A087WSY4 118 aa10.7□□□□□ -0.7
CCHCR1-203ENST00000396268 M0R381 172 aa10.7□□□□□ -0.7
CCHCR1-203ENST00000396268 HIST2H2BCQ6DN03 193 aa10.7□□□□□ -0.7
CCHCR1-203ENST00000396268 GCN1Q92616 2671 aaKnown RBP10.7□□□□□ -0.7
CCHCR1-203ENST00000396268 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.7□□□□□ -0.71e-7■■■■■ 33.8
CCHCR1-203ENST00000396268 CSPG4Q6UVK1 2322 aa10.7□□□□□ -0.7
CCHCR1-203ENST00000396268 IGHV3OR16-10A0A075B7F0 116 aa10.7□□□□□ -0.7
CCHCR1-203ENST00000396268 APOMO95445 188 aa10.7□□□□□ -0.7
CCHCR1-203ENST00000396268 IGF1P05019 195 aa10.7□□□□□ -0.7
CCHCR1-203ENST00000396268 SCGB2A2Q13296 93 aa10.7□□□□□ -0.7
CCHCR1-203ENST00000396268 SYT8Q8NBV8 401 aa10.7□□□□□ -0.7
CCHCR1-203ENST00000396268 TM2D2Q9BX73 214 aa10.7□□□□□ -0.7
CCHCR1-203ENST00000396268 S100A4P26447 101 aaKnown RBP10.69□□□□□ -0.7
CCHCR1-203ENST00000396268 PRR9Q5T870 116 aa10.69□□□□□ -0.7
CCHCR1-203ENST00000396268 PGPEP1Q9NXJ5 209 aa10.69□□□□□ -0.7
CCHCR1-203ENST00000396268 TRBV7-1A0A0A6YYK4 115 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 PSMB2P49721 201 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 CRYBA4P53673 196 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 EMP1P54849 157 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 DEFB1P60022 68 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 IGKV3-7A0A075B6H7 116 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 CENPVL3A0A0U1RRI6 287 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 C9orf47Q6ZRZ4 202 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 AJUBAQ96IF1 538 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 MRPL16Q9NX20 251 aaKnown RBP10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 CCDC168Q8NDH2 2452 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 ITPR2Q14571 2701 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 TEX15Q9BXT5 2789 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 RPL11P62913 178 aaKnown RBP10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 RRN3P1Q2M238 152 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 ZFP2Q6ZN57 461 aa10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 GEMIN7Q9H840 131 aaKnown RBP10.68□□□□□ -0.7
CCHCR1-203ENST00000396268 A0A087WX48 190 aa10.67□□□□□ -0.7
CCHCR1-203ENST00000396268 HLA-DRB4P13762 266 aa10.67□□□□□ -0.7
CCHCR1-203ENST00000396268 HLA-DRB4X5D2U9 266 aa10.67□□□□□ -0.7
CCHCR1-203ENST00000396268 MXRA5Q9NR99 2828 aa10.67□□□□□ -0.7
CCHCR1-203ENST00000396268 MT-ATP8P03928 68 aa10.67□□□□□ -0.7
CCHCR1-203ENST00000396268 MAPK1IP1LQ8NDC0 245 aa10.67□□□□□ -0.7
CCHCR1-203ENST00000396268 C10orf105Q8TEF2 133 aa10.66□□□□□ -0.7
CCHCR1-203ENST00000396268 C20orf173Q96LM9 149 aa10.66□□□□□ -0.7
CCHCR1-203ENST00000396268 SMIM2Q9BVW6 85 aa10.66□□□□□ -0.7
CCHCR1-203ENST00000396268 LINC01549A6NIU2 74 aa10.66□□□□□ -0.7
CCHCR1-203ENST00000396268 NPFFO15130 113 aa10.66□□□□□ -0.7
CCHCR1-203ENST00000396268 COX6B1P14854 86 aa10.66□□□□□ -0.7
CCHCR1-203ENST00000396268 C14orf178Q8N769 122 aaPredicted RBP10.66□□□□□ -0.7
CCHCR1-203ENST00000396268 MRPL53Q96EL3 112 aaKnown RBP10.66□□□□□ -0.7
CCHCR1-203ENST00000396268 SCGB3A1Q96QR1 104 aa10.66□□□□□ -0.7
CCHCR1-203ENST00000396268 TLN2Q9Y4G6 2542 aa10.66□□□□□ -0.7
CCHCR1-203ENST00000396268 MGPP08493 103 aa10.65□□□□□ -0.7
CCHCR1-203ENST00000396268 SPINK8P0C7L1 97 aa10.65□□□□□ -0.7
CCHCR1-203ENST00000396268 GATA3P23771 443 aa10.65□□□□□ -0.7
CCHCR1-203ENST00000396268 KLHL30-AS1Q8NEE0 82 aa10.65□□□□□ -0.7
CCHCR1-203ENST00000396268 PLNP26678 52 aa10.65□□□□□ -0.7
CCHCR1-203ENST00000396268 ARL3P36405 182 aa10.65□□□□□ -0.7
CCHCR1-203ENST00000396268 SHISA2Q6UWI4 295 aa10.65□□□□□ -0.7
CCHCR1-203ENST00000396268 SCGB1D4Q6XE38 83 aa10.65□□□□□ -0.7
CCHCR1-203ENST00000396268 C5orf56Q8N8D9 126 aa10.65□□□□□ -0.7
CCHCR1-203ENST00000396268 SPATA25Q9BR10 227 aa10.65□□□□□ -0.7
CCHCR1-203ENST00000396268 PRO0461Q9UI25 63 aa10.65□□□□□ -0.7
CCHCR1-203ENST00000396268 PHLDA3Q9Y5J5 127 aa10.65□□□□□ -0.7
CCHCR1-203ENST00000396268 TRAV41A0A0B4J266 112 aa10.65□□□□□ -0.71
CCHCR1-203ENST00000396268 OR11H12B2RN74 326 aa10.65□□□□□ -0.71
CCHCR1-203ENST00000396268 HOXA3O43365 443 aaPredicted RBP10.65□□□□□ -0.71
CCHCR1-203ENST00000396268 SRSF9Q13242 221 aaKnown RBP eCLIP10.65□□□□□ -0.71
CCHCR1-203ENST00000396268 NFE4Q86UQ8 179 aa10.65□□□□□ -0.71
CCHCR1-203ENST00000396268 OR11H1Q8NG94 326 aa10.65□□□□□ -0.71
CCHCR1-203ENST00000396268 OR11H2Q8NH07 326 aa10.65□□□□□ -0.71
CCHCR1-203ENST00000396268 RPL39LQ96EH5 51 aaKnown RBP10.65□□□□□ -0.71
CCHCR1-203ENST00000396268 SUMO2P61956 95 aaKnown RBP10.64□□□□□ -0.71
CCHCR1-203ENST00000396268 UNQ9165/PRO28630Q6UXU0 137 aa10.64□□□□□ -0.71
CCHCR1-203ENST00000396268 C9orf139Q6ZV77 190 aa10.64□□□□□ -0.71
CCHCR1-203ENST00000396268 OR10J6PQ8NGY7 276 aa10.64□□□□□ -0.71
CCHCR1-203ENST00000396268 MRAP2Q96G30 205 aa10.64□□□□□ -0.71
CCHCR1-203ENST00000396268 F8VRH5 84 aa10.64□□□□□ -0.71
CCHCR1-203ENST00000396268 H7C1H1 209 aa10.64□□□□□ -0.71
CCHCR1-203ENST00000396268 TRBV12-3P01733 135 aa10.64□□□□□ -0.71
CCHCR1-203ENST00000396268 MORN3Q6PF18 240 aaPredicted RBP10.64□□□□□ -0.71
CCHCR1-203ENST00000396268 PIMREGQ9BSJ6 248 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms