RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 LGALS9CQ6DKI2 356 aa11.69□□□□□ -0.54
RAPGEF3-203ENST00000395360 C18orf15Q96N68 181 aa11.69□□□□□ -0.54
RAPGEF3-203ENST00000395360 LINC01546A6NGU7 62 aa11.68□□□□□ -0.54
RAPGEF3-203ENST00000395360 RNASE4P34096 147 aaKnown RBP11.68□□□□□ -0.54
RAPGEF3-203ENST00000395360 OR2K2Q8NGT1 345 aa11.68□□□□□ -0.54
RAPGEF3-203ENST00000395360 K7EMT4 169 aa11.68□□□□□ -0.54
RAPGEF3-203ENST00000395360 SPRY2O43597 315 aa11.68□□□□□ -0.54
RAPGEF3-203ENST00000395360 MPV17L2Q567V2 206 aa11.68□□□□□ -0.54
RAPGEF3-203ENST00000395360 FAM19A4Q96LR4 140 aa11.68□□□□□ -0.54
RAPGEF3-203ENST00000395360 SMR3AQ99954 134 aa11.68□□□□□ -0.54
RAPGEF3-203ENST00000395360 MXRA5Q9NR99 2828 aa11.67□□□□□ -0.54
RAPGEF3-203ENST00000395360 M0R381 172 aa11.67□□□□□ -0.54
RAPGEF3-203ENST00000395360 S100A4P26447 101 aaKnown RBP11.67□□□□□ -0.54
RAPGEF3-203ENST00000395360 CBY3A6NI87 242 aa11.66□□□□□ -0.54
RAPGEF3-203ENST00000395360 FCER1GP30273 86 aa11.66□□□□□ -0.54
RAPGEF3-203ENST00000395360 ANXA2RQ3ZCQ2 193 aa11.66□□□□□ -0.54
RAPGEF3-203ENST00000395360 NRACQ8N912 160 aa11.66□□□□□ -0.54
RAPGEF3-203ENST00000395360 COX8AP10176 69 aa11.66□□□□□ -0.54
RAPGEF3-203ENST00000395360 UBE2V1Q13404 147 aa11.66□□□□□ -0.54
RAPGEF3-203ENST00000395360 Q8N8P6 123 aa11.66□□□□□ -0.54
RAPGEF3-203ENST00000395360 F8P00451 2351 aa11.66□□□□□ -0.54
RAPGEF3-203ENST00000395360 HIVEP2P31629 2446 aa11.65□□□□□ -0.54
RAPGEF3-203ENST00000395360 IGLV2-18A0A075B6J9 118 aa11.65□□□□□ -0.54
RAPGEF3-203ENST00000395360 NUDT3O95989 172 aa11.65□□□□□ -0.54
RAPGEF3-203ENST00000395360 ASIPP42127 132 aa11.65□□□□□ -0.54
RAPGEF3-203ENST00000395360 DCANP1Q8TF63 244 aa11.65□□□□□ -0.54
RAPGEF3-203ENST00000395360 TCTAP57738 103 aa11.65□□□□□ -0.54
RAPGEF3-203ENST00000395360 SCGB2A2Q13296 93 aa11.65□□□□□ -0.54
RAPGEF3-203ENST00000395360 Q6ZVH6 145 aa11.65□□□□□ -0.54
RAPGEF3-203ENST00000395360 TMEM158Q8WZ71 300 aa11.65□□□□□ -0.54
RAPGEF3-203ENST00000395360 VPREB3Q9UKI3 123 aa11.65□□□□□ -0.54
RAPGEF3-203ENST00000395360 PHLDA3Q9Y5J5 127 aa11.65□□□□□ -0.54
RAPGEF3-203ENST00000395360 APRG1Q8IVJ8 170 aa11.64□□□□□ -0.55
RAPGEF3-203ENST00000395360 VPS25Q9BRG1 176 aa11.64□□□□□ -0.55
RAPGEF3-203ENST00000395360 DKK2Q9UBU2 259 aa11.64□□□□□ -0.55
RAPGEF3-203ENST00000395360 GNRH2O43555 120 aa11.64□□□□□ -0.55
RAPGEF3-203ENST00000395360 ID1P41134 155 aa11.64□□□□□ -0.55
RAPGEF3-203ENST00000395360 TRBV7-9A0A0J9YWB2 115 aa11.63□□□□□ -0.55
RAPGEF3-203ENST00000395360 SONP18583 2426 aaKnown RBP11.63□□□□□ -0.55
RAPGEF3-203ENST00000395360 WFDC12Q8WWY7 111 aa11.63□□□□□ -0.55
RAPGEF3-203ENST00000395360 DPF1Q92782 380 aa11.63□□□□□ -0.55
RAPGEF3-203ENST00000395360 TMEM89A2RUT3 159 aa11.62□□□□□ -0.55
RAPGEF3-203ENST00000395360 TMEM238C9JI98 176 aa11.62□□□□□ -0.55
RAPGEF3-203ENST00000395360 Q6YL49 198 aa11.62□□□□□ -0.55
RAPGEF3-203ENST00000395360 C14orf178Q8N769 122 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF3-203ENST00000395360 PRSS1P07477 247 aa11.61□□□□□ -0.55
RAPGEF3-203ENST00000395360 LAGE3Q14657 143 aa11.61□□□□□ -0.55
RAPGEF3-203ENST00000395360 BVES-AS1Q5T3Y7 98 aa11.61□□□□□ -0.55
RAPGEF3-203ENST00000395360 C12orf54Q6X4T0 127 aa11.61□□□□□ -0.55
RAPGEF3-203ENST00000395360 DEFB125Q8N687 156 aa11.61□□□□□ -0.55
RAPGEF3-203ENST00000395360 MRAP2Q96G30 205 aa11.61□□□□□ -0.55
RAPGEF3-203ENST00000395360 KLLNB2CW77 178 aa11.61□□□□□ -0.55
RAPGEF3-203ENST00000395360 RNASE3P12724 160 aaKnown RBP11.61□□□□□ -0.55
RAPGEF3-203ENST00000395360 C2orf91Q6ZV80 131 aa11.61□□□□□ -0.55
RAPGEF3-203ENST00000395360 OR4C5Q8NGB2 326 aa11.61□□□□□ -0.55
RAPGEF3-203ENST00000395360 OR1N2Q8NGR9 330 aa11.61□□□□□ -0.55
RAPGEF3-203ENST00000395360 HOXA3O43365 443 aaPredicted RBP11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 ZNF688P0C7X2 276 aa11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 SMIM17P0DL12 118 aa11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 FGF6P10767 208 aa11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 SYNJ2BPP57105 145 aa11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 SAMD13Q5VXD3 122 aa11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 CSTL1Q9H114 145 aa11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 DPH3P1Q9H4G8 78 aa11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 COX11Q9Y6N1 276 aa11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 SORL1Q92673 2214 aa11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 ODF1Q14990 250 aa11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 PSMG4Q5JS54 123 aa11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 ZNF702PQ9H963 129 aa11.6□□□□□ -0.55
RAPGEF3-203ENST00000395360 MED14OSP0DP75 135 aa11.59□□□□□ -0.55
RAPGEF3-203ENST00000395360 DUX5Q96PT3 197 aa11.59□□□□□ -0.55
RAPGEF3-203ENST00000395360 MUC4Q99102 2169 aa11.59□□□□□ -0.55
RAPGEF3-203ENST00000395360 FAM159AQ6UWV7 190 aa11.59□□□□□ -0.55
RAPGEF3-203ENST00000395360 NSD1Q96L73 2696 aaPredicted RBP11.58□□□□□ -0.55
RAPGEF3-203ENST00000395360 IGHV4OR15-8A0A075B7B6 117 aa11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 A0A087WW49 117 aa11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 INAFM1C9JVW0 142 aa11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 MGPP08493 103 aa11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 LGALS1P09382 135 aaKnown RBP11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 NMUP48645 174 aa11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 RASL10AQ92737 203 aa11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 SMIM2Q9BVW6 85 aa11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 TRAV12-3A0A0B4J271 114 aa11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 ELANEP08246 267 aa11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 SNRPD3P62318 126 aaKnown RBP11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 BOD1L2Q8IYS8 172 aa11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 MYOZ3Q8TDC0 251 aa11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 RPL39LQ96EH5 51 aaKnown RBP11.58□□□□□ -0.56
RAPGEF3-203ENST00000395360 AGRNO00468 2067 aa11.57□□□□□ -0.56
RAPGEF3-203ENST00000395360 MTORP42345 2549 aa11.57□□□□□ -0.56
RAPGEF3-203ENST00000395360 IGKV3-20P01619 116 aa11.57□□□□□ -0.56
RAPGEF3-203ENST00000395360 HOXD3P31249 432 aaPredicted RBP11.57□□□□□ -0.56
RAPGEF3-203ENST00000395360 SUMO2P61956 95 aaKnown RBP11.57□□□□□ -0.56
RAPGEF3-203ENST00000395360 AP1S3Q96PC3 154 aa11.57□□□□□ -0.56
RAPGEF3-203ENST00000395360 ANK3Q12955 4377 aaKnown RBP11.57□□□□□ -0.56
RAPGEF3-203ENST00000395360 ATP5LO75964 103 aa11.57□□□□□ -0.56
RAPGEF3-203ENST00000395360 UBE2E2Q96LR5 201 aa11.57□□□□□ -0.56
RAPGEF3-203ENST00000395360 ZMAT4Q9H898 229 aa11.57□□□□□ -0.56
RAPGEF3-203ENST00000395360 PCP2Q8IVA1 136 aa11.56□□□□□ -0.56
RAPGEF3-203ENST00000395360 HHLA3Q9XRX5 114 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms