RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 CRXO43186 299 aaPredicted RBP9.92□□□□□ -0.82
PTN-202ENST00000393083 S100A4P26447 101 aaKnown RBP9.92□□□□□ -0.82
PTN-202ENST00000393083 SLAQ13239 276 aa9.92□□□□□ -0.82
PTN-202ENST00000393083 GATD1Q8NB37 220 aa9.92□□□□□ -0.82
PTN-202ENST00000393083 TIMM8BQ9Y5J9 83 aaPredicted RBP9.92□□□□□ -0.82
PTN-202ENST00000393083 SNAI2O43623 268 aa9.92□□□□□ -0.82
PTN-202ENST00000393083 OR5AL1P0C617 328 aa9.92□□□□□ -0.82
PTN-202ENST00000393083 RBMY1A1P0DJD3 496 aaKnown RBP9.92□□□□□ -0.82
PTN-202ENST00000393083 RBMY1CP0DJD4 496 aa9.92□□□□□ -0.82
PTN-202ENST00000393083 NDUFA6P56556 154 aa9.92□□□□□ -0.82
PTN-202ENST00000393083 RBMY1FQ15415 496 aaKnown RBP9.92□□□□□ -0.82
PTN-202ENST00000393083 KIAA1644Q3SXP7 199 aa9.92□□□□□ -0.82
PTN-202ENST00000393083 CNFNQ9BYD5 112 aa9.92□□□□□ -0.82
PTN-202ENST00000393083 IGHV1OR15-1A0A075B7D0 117 aa9.91□□□□□ -0.82
PTN-202ENST00000393083 GNRH2O43555 120 aa9.91□□□□□ -0.82
PTN-202ENST00000393083 INSP01308 110 aa9.91□□□□□ -0.82
PTN-202ENST00000393083 AMBPP02760 352 aa9.91□□□□□ -0.82
PTN-202ENST00000393083 MED14OSP0DP75 135 aa9.91□□□□□ -0.82
PTN-202ENST00000393083 TWIST1Q15672 202 aa9.91□□□□□ -0.82
PTN-202ENST00000393083 DNLZQ5SXM8 178 aa9.91□□□□□ -0.82
PTN-202ENST00000393083 OR10AG1Q8NH19 301 aa9.91□□□□□ -0.82
PTN-202ENST00000393083 LOC105371267A0A1B0GV96 52 aa9.9□□□□□ -0.82
PTN-202ENST00000393083 NTF3P20783 257 aa9.9□□□□□ -0.82
PTN-202ENST00000393083 SNRPEP62304 92 aaKnown RBP9.9□□□□□ -0.82
PTN-202ENST00000393083 CACNG7P62955 275 aa9.9□□□□□ -0.82
PTN-202ENST00000393083 TDRG1Q3Y452 100 aa9.9□□□□□ -0.82
PTN-202ENST00000393083 RNASE3P12724 160 aaKnown RBP9.89□□□□□ -0.83
PTN-202ENST00000393083 SPANXN1Q5VSR9 72 aa9.89□□□□□ -0.83
PTN-202ENST00000393083 SBSPONQ8IVN8 264 aa9.89□□□□□ -0.83
PTN-202ENST00000393083 MUC4Q99102 2169 aa9.89□□□□□ -0.83
PTN-202ENST00000393083 SRIP30626 198 aa9.88□□□□□ -0.83
PTN-202ENST00000393083 NUTF2P61970 127 aaKnown RBP9.88□□□□□ -0.83
PTN-202ENST00000393083 ZNF493Q6ZR52 646 aa9.88□□□□□ -0.83
PTN-202ENST00000393083 C20orf144Q9BQM9 153 aa9.88□□□□□ -0.83
PTN-202ENST00000393083 MSRB1Q9NZV6 116 aa9.88□□□□□ -0.83
PTN-202ENST00000393083 XCL2Q9UBD3 114 aa9.88□□□□□ -0.83
PTN-202ENST00000393083 TP53TG3Q9ULZ0 132 aa9.88□□□□□ -0.83
PTN-202ENST00000393083 PHLDA3Q9Y5J5 127 aa9.88□□□□□ -0.83
PTN-202ENST00000393083 TRGV11A0A075B6L2 103 aa9.88□□□□□ -0.83
PTN-202ENST00000393083 IGHV3-16A0A0C4DH30 117 aa9.88□□□□□ -0.83
PTN-202ENST00000393083 C5orf52A6NGY3 159 aa9.88□□□□□ -0.83
PTN-202ENST00000393083 RPL35AP18077 110 aaKnown RBP9.88□□□□□ -0.83
PTN-202ENST00000393083 SCRT2Q9NQ03 307 aa9.88□□□□□ -0.83
PTN-202ENST00000393083 TGP01266 2768 aa9.88□□□□□ -0.83
PTN-202ENST00000393083 HUWE1Q7Z6Z7 4374 aaKnown RBP9.87□□□□□ -0.83
PTN-202ENST00000393083 IGHV4-4A0A075B6R2 117 aa9.87□□□□□ -0.83
PTN-202ENST00000393083 LOC102724200A0A096LPH7 203 aaPredicted RBP9.87□□□□□ -0.83
PTN-202ENST00000393083 CBY3A6NI87 242 aa9.87□□□□□ -0.83
PTN-202ENST00000393083 M0R381 172 aa9.87□□□□□ -0.83
PTN-202ENST00000393083 SPRY2O43597 315 aa9.87□□□□□ -0.83
PTN-202ENST00000393083 TMEM191AQ9H0A3 160 aa9.87□□□□□ -0.83
PTN-202ENST00000393083 FAM104BQ5XKR9 115 aa9.86□□□□□ -0.83
PTN-202ENST00000393083 AMN1Q8IY45 258 aa9.86□□□□□ -0.83
PTN-202ENST00000393083 C9orf85Q96MD7 179 aa9.86□□□□□ -0.83
PTN-202ENST00000393083 LINC01587Q99440 93 aa9.86□□□□□ -0.83
PTN-202ENST00000393083 COL7A1Q02388 2944 aa9.85□□□□□ -0.83
PTN-202ENST00000393083 UBE2CO00762 179 aa9.85□□□□□ -0.83
PTN-202ENST00000393083 NHLRC4P0CG21 123 aaPredicted RBP9.85□□□□□ -0.83
PTN-202ENST00000393083 HTN1P15515 57 aa9.85□□□□□ -0.83
PTN-202ENST00000393083 MORN3Q6PF18 240 aaPredicted RBP9.85□□□□□ -0.83
PTN-202ENST00000393083 SMIM15Q7Z3B0 74 aa9.85□□□□□ -0.83
PTN-202ENST00000393083 TM2D3Q9BRN9 247 aa9.85□□□□□ -0.83
PTN-202ENST00000393083 ALKBH7Q9BT30 221 aaPredicted RBP9.85□□□□□ -0.83
PTN-202ENST00000393083 MDFICQ9P1T7 246 aa9.85□□□□□ -0.83
PTN-202ENST00000393083 NXPH4O95158 308 aa9.84□□□□□ -0.83
PTN-202ENST00000393083 HOXA5P20719 270 aa9.84□□□□□ -0.83
PTN-202ENST00000393083 OR10J3Q5JRS4 329 aa9.84□□□□□ -0.83
PTN-202ENST00000393083 COA6Q5JTJ3 125 aaKnown RBP9.84□□□□□ -0.83
PTN-202ENST00000393083 LINC00467Q9BRT7 94 aa9.84□□□□□ -0.83
PTN-202ENST00000393083 TMEM208Q9BTX3 173 aa9.84□□□□□ -0.83
PTN-202ENST00000393083 ZNF415Q09FC8 603 aa9.84□□□□□ -0.83
PTN-202ENST00000393083 Q0VG73 95 aa9.84□□□□□ -0.83
PTN-202ENST00000393083 MRPL51Q4U2R6 128 aaKnown RBP9.84□□□□□ -0.83
PTN-202ENST00000393083 C1orf158Q8N1D5 194 aa9.84□□□□□ -0.83
PTN-202ENST00000393083 TMEM256Q8N2U0 113 aa9.84□□□□□ -0.83
PTN-202ENST00000393083 C18orf32Q8TCD1 76 aa9.84□□□□□ -0.83
PTN-202ENST00000393083 AP1S3Q96PC3 154 aa9.84□□□□□ -0.83
PTN-202ENST00000393083 C1QTNF4Q9BXJ3 329 aa9.84□□□□□ -0.83
PTN-202ENST00000393083 IGHV3OR16-12A0A075B7B8 117 aa9.83□□□□□ -0.84
PTN-202ENST00000393083 GIG44P09565 113 aaPredicted RBP9.83□□□□□ -0.84
PTN-202ENST00000393083 EVI2AP22794 236 aa9.83□□□□□ -0.84
PTN-202ENST00000393083 IQCJQ1A5X6 159 aa9.83□□□□□ -0.84
PTN-202ENST00000393083 PDZD11Q5EBL8 140 aa9.83□□□□□ -0.84
PTN-202ENST00000393083 BAGE3Q86Y29 109 aa9.83□□□□□ -0.84
PTN-202ENST00000393083 RNF185Q96GF1 192 aa9.83□□□□□ -0.84
PTN-202ENST00000393083 D6R8Y8 96 aa9.82□□□□□ -0.84
PTN-202ENST00000393083 RAB4AP20338 218 aa9.82□□□□□ -0.84
PTN-202ENST00000393083 HIST3H2BBQ8N257 126 aa9.82□□□□□ -0.84
PTN-202ENST00000393083 SYT8Q8NBV8 401 aa9.82□□□□□ -0.84
PTN-202ENST00000393083 GOLT1BQ9Y3E0 138 aa9.82□□□□□ -0.84
PTN-202ENST00000393083 KIR2DL5BA0A0G2JN68 375 aa9.81□□□□□ -0.84
PTN-202ENST00000393083 KIR2DL5BA0A0G2JPC4 375 aa9.81□□□□□ -0.84
PTN-202ENST00000393083 PRM2P04554 102 aa9.81□□□□□ -0.84
PTN-202ENST00000393083 KIR2DL5AQ8N109 375 aa9.81□□□□□ -0.84
PTN-202ENST00000393083 ORMDL3Q8N138 153 aa9.81□□□□□ -0.84
PTN-202ENST00000393083 KIR2DL5BQ8NHK3 375 aa9.81□□□□□ -0.84
PTN-202ENST00000393083 SMKR1H3BMG3 65 aa9.8□□□□□ -0.84
PTN-202ENST00000393083 LCE2BO14633 110 aa9.8□□□□□ -0.84
PTN-202ENST00000393083 SERF1AO75920 110 aa9.8□□□□□ -0.84
PTN-202ENST00000393083 NCR2O95944 276 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms