RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 FAM60AQ9NP50 221 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 KCNIP2Q9NS61 270 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 PCTPQ9UKL6 214 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 TIMM9Q9Y5J7 89 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 TRAPPC1Q9Y5R8 145 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 GPR179Q6PRD1 2367 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 C2orf16Q68DN1 1984 aa1.65□□□□□ -2.15
PTPRC-205ENST00000391970 TNRC6AQ8NDV7 1962 aaKnown RBP1.65□□□□□ -2.15
PTPRC-205ENST00000391970 LCTP09848 1927 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 UBR4Q5T4S7 5183 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 TRBV20-1A0A075B6N2 111 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 TRAV27A0A087WT01 109 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 TRGV5A0A0B4J1U4 118 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 F2Z2F3 143 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 J3QLW9 94 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 M0R129 80 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 ATOX1O00244 68 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 UPK2O00526 184 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 FFAR1O14842 300 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 PIN1P1O15428 100 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 PDCD6O75340 191 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 CD3DP04234 171 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 IGKV5-2P06315 115 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 ACYP1P07311 99 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 CPMP14384 443 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 PSMB3P49720 205 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 DSCR4P56555 118 aaPredicted RBP1.64□□□□□ -2.15
PTPRC-205ENST00000391970 KRTDAPP60985 99 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 HBG1P69891 147 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 HBG2P69892 147 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 LGALS9BQ3B8N2 356 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 VMA21Q3ZAQ7 101 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 C9orf153Q5TBE3 101 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 LGALS9CQ6DKI2 356 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 C22orf39Q6P5X5 142 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 HRCT1Q6UXD1 115 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 TMEM136Q6ZRR5 245 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 ATP5L2Q7Z4Y8 100 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 C5orf38Q86SI9 138 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 MARCH3Q86UD3 253 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 EXOC3-AS1Q8N2X6 119 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 FAM57AQ8TBR7 257 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 LMX1AQ8TE12 382 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 COPS9Q8WXC6 57 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 FMC1Q96HJ9 113 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 SMIM7Q9BQ49 75 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 TMEM147Q9BVK8 224 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 IL36BQ9NZH7 164 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 SERP1Q9Y6X1 66 aa1.64□□□□□ -2.15
PTPRC-205ENST00000391970 KIAA2026Q5HYC2 2103 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 DOCK3Q8IZD9 2030 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 COL6A3P12111 3177 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 TRAV17A0A0B4J275 112 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 PIGBOS1A0A0B4J2F0 54 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 FAM236AA0A1B0GUQ0 79 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 FAM236BA0A1B0GV22 79 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 TCRBV4S1A1TA0A5B7 111 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 RIIAD1A6NNX1 92 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 OOSP1A8MZH6 123 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 IGLL5B9A064 214 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 SDCBPO00560 298 aaPredicted RBP1.63□□□□□ -2.15
PTPRC-205ENST00000391970 BCE1O60756 84 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 CST7O76096 145 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 PPYP01298 95 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 IGHV1-46P01743 117 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 IGLV7-43P04211 117 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 SMIM13P0DJ93 91 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 RNASE2P10153 161 aaKnown RBP1.63□□□□□ -2.15
PTPRC-205ENST00000391970 FKBP2P26885 142 aaKnown RBP1.63□□□□□ -2.15
PTPRC-205ENST00000391970 UBE2D1P51668 147 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 TAS2R45P59539 299 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 RPL30P62888 115 aaKnown RBP1.63□□□□□ -2.15
PTPRC-205ENST00000391970 CCL20P78556 96 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 INSL4Q14641 139 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 RTL8BQ17RB0 113 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 NOXRED1Q6NXP6 359 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 DAZ4Q86SG3 579 aaKnown RBP1.63□□□□□ -2.15
PTPRC-205ENST00000391970 PRNTQ86SH4 94 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 LINC00311Q8N616 119 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 FAM213BQ8TBF2 198 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 METTL26Q96S19 204 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 NAA38Q9BRA0 125 aaKnown RBP1.63□□□□□ -2.15
PTPRC-205ENST00000391970 RNASE7Q9H1E1 156 aaKnown RBP1.63□□□□□ -2.15
PTPRC-205ENST00000391970 DAZ1Q9NQZ3 744 aaKnown RBP1.63□□□□□ -2.15
PTPRC-205ENST00000391970 SLC39A9Q9NUM3 307 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 PLXNB3Q9ULL4 1909 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 COL4A5P29400 1685 aa1.63□□□□□ -2.15
PTPRC-205ENST00000391970 MDC1Q14676 2089 aaKnown RBP1.62□□□□□ -2.15
PTPRC-205ENST00000391970 EXPH5Q8NEV8 1989 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 TRBV7-3A0A075B6L6 115 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 TRAV13-1A0A0B4J241 112 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 A0A1B0GXF2 115 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 SMIM27A0A1W2PRY6 76 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 GRIFINA4D1Z8 144 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 RBAKDNA6NC62 111 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 C19orf71A6NCJ1 209 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 LINC01546A6NGU7 62 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 CRYM-AS1A6NIL9 109 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 IGKCP01834 107 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 PRH1P02810 166 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms