RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 SMIM2Q9BVW6 85 aa11.5□□□□□ -0.57
MSH5-203ENST00000375750 CHD6Q8TD26 2715 aa11.5□□□□□ -0.57
MSH5-203ENST00000375750 SAMD13Q5VXD3 122 aa11.5□□□□□ -0.57
MSH5-203ENST00000375750 CHTOPQ9Y3Y2 248 aaKnown RBP11.5□□□□□ -0.57
MSH5-203ENST00000375750 UNQ9165/PRO28630Q6UXU0 137 aa11.5□□□□□ -0.57
MSH5-203ENST00000375750 WFDC12Q8WWY7 111 aa11.5□□□□□ -0.57
MSH5-203ENST00000375750 TRBV7-3A0A075B6L6 115 aa11.49□□□□□ -0.57
MSH5-203ENST00000375750 GNRH2O43555 120 aa11.49□□□□□ -0.57
MSH5-203ENST00000375750 C9orf47Q6ZRZ4 202 aa11.49□□□□□ -0.57
MSH5-203ENST00000375750 SPAG8Q99932 426 aaPredicted RBP11.49□□□□□ -0.57
MSH5-203ENST00000375750 H7C1H1 209 aa11.49□□□□□ -0.57
MSH5-203ENST00000375750 PLEKHB2Q96CS7 222 aa11.49□□□□□ -0.57
MSH5-203ENST00000375750 F8VRH5 84 aa11.48□□□□□ -0.57
MSH5-203ENST00000375750 USP9YO00507 2555 aaPredicted RBP11.48□□□□□ -0.57
MSH5-203ENST00000375750 MAPK1IP1LQ8NDC0 245 aa11.48□□□□□ -0.57
MSH5-203ENST00000375750 KLHL30-AS1Q8NEE0 82 aa11.48□□□□□ -0.57
MSH5-203ENST00000375750 EEF1AKMT3Q96AZ1 226 aa11.48□□□□□ -0.57
MSH5-203ENST00000375750 PRSS29PA6NIE9 313 aa11.48□□□□□ -0.57
MSH5-203ENST00000375750 IGHV4-38-2P0DP08 117 aa11.48□□□□□ -0.57
MSH5-203ENST00000375750 PTPN13Q12923 2485 aa11.48□□□□□ -0.57
MSH5-203ENST00000375750 MYMXA0A1B0GTQ4 84 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 MSMBP08118 114 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 LGALS1P09382 135 aaKnown RBP11.47□□□□□ -0.57
MSH5-203ENST00000375750 GPHB5Q86YW7 130 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 IGHV1-69DA0A0B4J2H0 117 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 PRSS47A8MTI9 375 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 OR11H12B2RN74 326 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 RNF223E7ERA6 249 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 IGHV1-69P01742 117 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 S100A4P26447 101 aaKnown RBP11.47□□□□□ -0.57
MSH5-203ENST00000375750 PLNP26678 52 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 RNASE4P34096 147 aaKnown RBP11.47□□□□□ -0.57
MSH5-203ENST00000375750 SUMO2P61956 95 aaKnown RBP11.47□□□□□ -0.57
MSH5-203ENST00000375750 ATP5G2Q06055 141 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 ANXA2RQ3ZCQ2 193 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 OR11H1Q8NG94 326 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 OR11H2Q8NH07 326 aa11.47□□□□□ -0.57
MSH5-203ENST00000375750 ANKRD17O75179 2603 aaKnown RBP11.47□□□□□ -0.57
MSH5-203ENST00000375750 SRD5A1P18405 259 aa11.46□□□□□ -0.57
MSH5-203ENST00000375750 RPL11P62913 178 aaKnown RBP11.46□□□□□ -0.57
MSH5-203ENST00000375750 RRN3P1Q2M238 152 aa11.46□□□□□ -0.57
MSH5-203ENST00000375750 MORN3Q6PF18 240 aaPredicted RBP11.46□□□□□ -0.57
MSH5-203ENST00000375750 ZFAND2AQ8N6M9 145 aa11.46□□□□□ -0.57
MSH5-203ENST00000375750 ABCA12Q86UK0 2595 aa11.46□□□□□ -0.58
MSH5-203ENST00000375750 GAGE12HA6NDE8 117 aa11.46□□□□□ -0.58
MSH5-203ENST00000375750 IGHV3-11P01762 117 aa11.46□□□□□ -0.58
MSH5-203ENST00000375750 HLA-DRB4P13762 266 aa11.46□□□□□ -0.58
MSH5-203ENST00000375750 RAB9AP51151 201 aa11.46□□□□□ -0.58
MSH5-203ENST00000375750 NEXN-AS1Q8NBZ9 246 aa11.46□□□□□ -0.58
MSH5-203ENST00000375750 BAALCQ8WXS3 180 aa11.46□□□□□ -0.58
MSH5-203ENST00000375750 PRADC1Q9BSG0 188 aa11.46□□□□□ -0.58
MSH5-203ENST00000375750 JPT2Q9H910 190 aa11.46□□□□□ -0.58
MSH5-203ENST00000375750 HLA-DRB4X5D2U9 266 aa11.46□□□□□ -0.58
MSH5-203ENST00000375750 IGHV4-4A0A075B6R2 117 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 AVPP01185 164 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 C2orf66Q6UXQ4 117 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 U3KQE9 123 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 TENM4Q6N022 2769 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 SLC25A16P16260 332 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 TOMM6Q96B49 74 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 MUC4Q99102 2169 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 F8W1H4 67 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 EDN2P20800 178 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 CD300EQ496F6 205 aaPredicted RBP11.45□□□□□ -0.58
MSH5-203ENST00000375750 GAGE13Q4V321 117 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 SIGMAR1Q99720 223 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 PGPEP1Q9NXJ5 209 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 PRO0461Q9UI25 63 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 PHLDA3Q9Y5J5 127 aa11.45□□□□□ -0.58
MSH5-203ENST00000375750 DUSP14O95147 198 aaKnown RBP11.44□□□□□ -0.58
MSH5-203ENST00000375750 DSCR9P59020 149 aa11.44□□□□□ -0.58
MSH5-203ENST00000375750 PSMG4Q5JS54 123 aa11.44□□□□□ -0.58
MSH5-203ENST00000375750 B4DSR2 109 aa11.44□□□□□ -0.58
MSH5-203ENST00000375750 C5orf56Q8N8D9 126 aa11.44□□□□□ -0.58
MSH5-203ENST00000375750 MRAP2Q96G30 205 aa11.44□□□□□ -0.58
MSH5-203ENST00000375750 ZNF815PA8K554 130 aa11.43□□□□□ -0.58
MSH5-203ENST00000375750 SCGB2A2Q13296 93 aa11.43□□□□□ -0.58
MSH5-203ENST00000375750 ZANQ9Y493 2812 aa11.43□□□□□ -0.58
MSH5-203ENST00000375750 ZNF469Q96JG9 3925 aaPredicted RBP11.43□□□□□ -0.58
MSH5-203ENST00000375750 TRBV7-1A0A0A6YYK4 115 aa11.43□□□□□ -0.58
MSH5-203ENST00000375750 ARL3P36405 182 aa11.43□□□□□ -0.58
MSH5-203ENST00000375750 HIST2H2BCQ6DN03 193 aa11.43□□□□□ -0.58
MSH5-203ENST00000375750 ZFP2Q6ZN57 461 aa11.43□□□□□ -0.58
MSH5-203ENST00000375750 TRAV12-1A0A0B4J245 112 aa11.42□□□□□ -0.58
MSH5-203ENST00000375750 A0A1B0GWB2 263 aa11.42□□□□□ -0.58
MSH5-203ENST00000375750 LINC01549A6NIU2 74 aa11.42□□□□□ -0.58
MSH5-203ENST00000375750 HOXA3O43365 443 aaPredicted RBP11.42□□□□□ -0.58
MSH5-203ENST00000375750 TAL2Q16559 108 aa11.42□□□□□ -0.58
MSH5-203ENST00000375750 TGFAP01135 160 aa11.42□□□□□ -0.58
MSH5-203ENST00000375750 ORMDL2Q53FV1 153 aa11.42□□□□□ -0.58
MSH5-203ENST00000375750 SCGB1D4Q6XE38 83 aa11.42□□□□□ -0.58
MSH5-203ENST00000375750 C20orf78Q9BR46 151 aa11.42□□□□□ -0.58
MSH5-203ENST00000375750 KMT2BQ9UMN6 2715 aaPredicted RBP11.41□□□□□ -0.58
MSH5-203ENST00000375750 A0A096LNT2 108 aa11.41□□□□□ -0.58
MSH5-203ENST00000375750 TRAV41A0A0B4J266 112 aa11.41□□□□□ -0.58
MSH5-203ENST00000375750 RPL39P62891 51 aaKnown RBP11.41□□□□□ -0.58
MSH5-203ENST00000375750 PTH2Q96A98 100 aa11.41□□□□□ -0.58
MSH5-203ENST00000375750 DPH3P1Q9H4G8 78 aa11.41□□□□□ -0.58
MSH5-203ENST00000375750 MRPL16Q9NX20 251 aaKnown RBP11.41□□□□□ -0.58
MSH5-203ENST00000375750 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.41□□□□□ -0.581e-7■■■■□ 22.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms