RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 GATD1Q8NB37 220 aa12.44□□□□□ -0.42
HLA-DMA-201ENST00000374843 OR10AG1Q8NH19 301 aa12.44□□□□□ -0.42
HLA-DMA-201ENST00000374843 BORCS7Q96B45 105 aa12.44□□□□□ -0.42
HLA-DMA-201ENST00000374843 RNF183Q96D59 192 aa12.44□□□□□ -0.42
HLA-DMA-201ENST00000374843 RCHY1Q96PM5 261 aa12.44□□□□□ -0.42
HLA-DMA-201ENST00000374843 TPPP3Q9BW30 176 aa12.44□□□□□ -0.42
HLA-DMA-201ENST00000374843 TP53TG1Q9Y2A0 90 aa12.44□□□□□ -0.42
HLA-DMA-201ENST00000374843 X6R8D5 127 aa12.44□□□□□ -0.42
HLA-DMA-201ENST00000374843 SMIM9A6NGZ8 99 aa12.43□□□□□ -0.42
HLA-DMA-201ENST00000374843 PRB2P02812 416 aaPredicted RBP12.43□□□□□ -0.42
HLA-DMA-201ENST00000374843 HBBP68871 147 aa12.43□□□□□ -0.42
HLA-DMA-201ENST00000374843 RIGQ13278 110 aa12.43□□□□□ -0.42
HLA-DMA-201ENST00000374843 MRPL54Q6P161 138 aaKnown RBP12.43□□□□□ -0.42
HLA-DMA-201ENST00000374843 PTH2Q96A98 100 aa12.43□□□□□ -0.42
HLA-DMA-201ENST00000374843 C16orf74Q96GX8 76 aa12.43□□□□□ -0.42
HLA-DMA-201ENST00000374843 SPRY2O43597 315 aa12.42□□□□□ -0.42
HLA-DMA-201ENST00000374843 PRM2P04554 102 aa12.42□□□□□ -0.42
HLA-DMA-201ENST00000374843 AZU1P20160 251 aa12.42□□□□□ -0.42
HLA-DMA-201ENST00000374843 RRN3P1Q2M238 152 aa12.42□□□□□ -0.42
HLA-DMA-201ENST00000374843 COX19Q49B96 90 aa12.42□□□□□ -0.42
HLA-DMA-201ENST00000374843 PIK3CD-AS1Q5SR53 167 aa12.42□□□□□ -0.42
HLA-DMA-201ENST00000374843 ZFP82Q8N141 532 aa12.42□□□□□ -0.42
HLA-DMA-201ENST00000374843 PHLDA3Q9Y5J5 127 aa12.42□□□□□ -0.42
HLA-DMA-201ENST00000374843 PLAC8L1A1L4L8 177 aa12.41□□□□□ -0.42
HLA-DMA-201ENST00000374843 SPINK4O60575 86 aa12.41□□□□□ -0.42
HLA-DMA-201ENST00000374843 S100A8P05109 93 aa12.41□□□□□ -0.42
HLA-DMA-201ENST00000374843 HTN1P15515 57 aa12.41□□□□□ -0.42
HLA-DMA-201ENST00000374843 RAB5AP20339 215 aa12.41□□□□□ -0.42
HLA-DMA-201ENST00000374843 SPXQ9BT56 116 aa12.41□□□□□ -0.42
HLA-DMA-201ENST00000374843 NDUFAF3Q9BU61 184 aa12.4□□□□□ -0.42
HLA-DMA-201ENST00000374843 GSN-AS1Q9NRJ2 163 aa12.4□□□□□ -0.42
HLA-DMA-201ENST00000374843 TIMM8BQ9Y5J9 83 aaPredicted RBP12.4□□□□□ -0.42
HLA-DMA-201ENST00000374843 NTF3P20783 257 aa12.39□□□□□ -0.43
HLA-DMA-201ENST00000374843 DAZ2Q13117 558 aaKnown RBP12.39□□□□□ -0.43
HLA-DMA-201ENST00000374843 SPANXN1Q5VSR9 72 aa12.39□□□□□ -0.43
HLA-DMA-201ENST00000374843 SYT8Q8NBV8 401 aa12.39□□□□□ -0.43
HLA-DMA-201ENST00000374843 GNB1LQ9BYB4 327 aa12.39□□□□□ -0.43
HLA-DMA-201ENST00000374843 MUC21A0A0G2JKD1 596 aa12.38□□□□□ -0.43
HLA-DMA-201ENST00000374843 MUC21A0A140T8X8 626 aa12.38□□□□□ -0.43
HLA-DMA-201ENST00000374843 M0R2P5 195 aa12.38□□□□□ -0.43
HLA-DMA-201ENST00000374843 MT-ND6P03923 174 aa12.38□□□□□ -0.43
HLA-DMA-201ENST00000374843 MIFP14174 115 aa12.38□□□□□ -0.43
HLA-DMA-201ENST00000374843 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
HLA-DMA-201ENST00000374843 TMEM136Q6ZRR5 245 aa12.38□□□□□ -0.43
HLA-DMA-201ENST00000374843 OR11H2Q8NH07 326 aa12.38□□□□□ -0.43
HLA-DMA-201ENST00000374843 OVOL2Q9BRP0 275 aa12.38□□□□□ -0.43
HLA-DMA-201ENST00000374843 M0R381 172 aa12.37□□□□□ -0.43
HLA-DMA-201ENST00000374843 HLA-DQA1P01909 254 aa12.37□□□□□ -0.43
HLA-DMA-201ENST00000374843 TWIST1Q15672 202 aa12.37□□□□□ -0.43
HLA-DMA-201ENST00000374843 Q8NAQ8 132 aa12.37□□□□□ -0.43
HLA-DMA-201ENST00000374843 AP1S3Q96PC3 154 aa12.37□□□□□ -0.43
HLA-DMA-201ENST00000374843 MSRB1Q9NZV6 116 aa12.37□□□□□ -0.43
HLA-DMA-201ENST00000374843 SNURFLB1AK76 121 aa12.36□□□□□ -0.43
HLA-DMA-201ENST00000374843 TRGC1P0CF51 173 aa12.36□□□□□ -0.43
HLA-DMA-201ENST00000374843 CAMPP49913 170 aa12.36□□□□□ -0.43
HLA-DMA-201ENST00000374843 LGALS9BQ3B8N2 356 aa12.36□□□□□ -0.43
HLA-DMA-201ENST00000374843 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.36□□□□□ -0.43
HLA-DMA-201ENST00000374843 TMEM191AQ9H0A3 160 aa12.36□□□□□ -0.43
HLA-DMA-201ENST00000374843 MUC4Q99102 2169 aa12.36□□□□□ -0.43
HLA-DMA-201ENST00000374843 RASL10AQ92737 203 aa12.35□□□□□ -0.43
HLA-DMA-201ENST00000374843 TM2D3Q9BRN9 247 aa12.35□□□□□ -0.43
HLA-DMA-201ENST00000374843 NBEAL2Q6ZNJ1 2754 aa12.35□□□□□ -0.43
HLA-DMA-201ENST00000374843 IGHV4-28A0A0C4DH34 117 aa12.34□□□□□ -0.43
HLA-DMA-201ENST00000374843 RPS10P46783 165 aaKnown RBP12.34□□□□□ -0.43
HLA-DMA-201ENST00000374843 ZNF876PQ49A33 203 aa12.34□□□□□ -0.43
HLA-DMA-201ENST00000374843 SBSPONQ8IVN8 264 aa12.34□□□□□ -0.43
HLA-DMA-201ENST00000374843 LINC00612Q8N6U2 182 aa12.34□□□□□ -0.43
HLA-DMA-201ENST00000374843 PHOX2AO14813 284 aa12.33□□□□□ -0.44
HLA-DMA-201ENST00000374843 SPATA25Q9BR10 227 aa12.33□□□□□ -0.44
HLA-DMA-201ENST00000374843 RETNQ9HD89 108 aa12.33□□□□□ -0.44
HLA-DMA-201ENST00000374843 KIF25-AS1Q9Y6Z4 181 aa12.33□□□□□ -0.44
HLA-DMA-201ENST00000374843 MEGF8Q7Z7M0 2845 aa12.33□□□□□ -0.44
HLA-DMA-201ENST00000374843 RAB4BP61018 213 aa12.32□□□□□ -0.44
HLA-DMA-201ENST00000374843 SSTP61278 116 aa12.32□□□□□ -0.44
HLA-DMA-201ENST00000374843 FAM104BQ5XKR9 115 aa12.32□□□□□ -0.44
HLA-DMA-201ENST00000374843 SMIM15Q7Z3B0 74 aa12.32□□□□□ -0.44
HLA-DMA-201ENST00000374843 MRAPQ8TCY5 172 aa12.32□□□□□ -0.44
HLA-DMA-201ENST00000374843 NOP10Q9NPE3 64 aaKnown RBP12.32□□□□□ -0.44
HLA-DMA-201ENST00000374843 MRPL16Q9NX20 251 aaKnown RBP12.32□□□□□ -0.44
HLA-DMA-201ENST00000374843 DNAH9Q9NYC9 4486 aa12.32□□□□□ -0.44
HLA-DMA-201ENST00000374843 LYRM9A8MSI8 78 aa12.31□□□□□ -0.44
HLA-DMA-201ENST00000374843 A8MWV9 139 aa12.31□□□□□ -0.44
HLA-DMA-201ENST00000374843 EVI2AP22794 236 aa12.31□□□□□ -0.44
HLA-DMA-201ENST00000374843 SLAQ13239 276 aa12.31□□□□□ -0.44
HLA-DMA-201ENST00000374843 DEFB121Q5J5C9 76 aa12.31□□□□□ -0.44
HLA-DMA-201ENST00000374843 Q6ZTI0 123 aa12.31□□□□□ -0.44
HLA-DMA-201ENST00000374843 POM121L12Q8N7R1 296 aa12.31□□□□□ -0.44
HLA-DMA-201ENST00000374843 C18orf15Q96N68 181 aa12.31□□□□□ -0.44
HLA-DMA-201ENST00000374843 MRPL18Q9H0U6 180 aaKnown RBP12.31□□□□□ -0.44
HLA-DMA-201ENST00000374843 C11orf68Q9H3H3 251 aaKnown RBP12.31□□□□□ -0.44
HLA-DMA-201ENST00000374843 DPH3P1Q9H4G8 78 aa12.31□□□□□ -0.44
HLA-DMA-201ENST00000374843 TRAPPC1Q9Y5R8 145 aa12.31□□□□□ -0.44
HLA-DMA-201ENST00000374843 HUWE1Q7Z6Z7 4374 aaKnown RBP12.3□□□□□ -0.44
HLA-DMA-201ENST00000374843 TRGV1A0A0A0MS02 117 aa12.3□□□□□ -0.44
HLA-DMA-201ENST00000374843 APCSP02743 223 aa12.3□□□□□ -0.44
HLA-DMA-201ENST00000374843 LINC00315P59091 139 aa12.3□□□□□ -0.44
HLA-DMA-201ENST00000374843 AMN1Q8IY45 258 aa12.3□□□□□ -0.44
HLA-DMA-201ENST00000374843 RNF185Q96GF1 192 aa12.3□□□□□ -0.44
HLA-DMA-201ENST00000374843 B9D2Q9BPU9 175 aa12.3□□□□□ -0.44
HLA-DMA-201ENST00000374843 RS1O15537 224 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms