RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 RIGQ13278 110 aa12.81□□□□□ -0.36
C9orf43-202ENST00000374165 MUC21A0A0G2JKD1 596 aa12.8□□□□□ -0.36
C9orf43-202ENST00000374165 MUC21A0A140T8X8 626 aa12.8□□□□□ -0.36
C9orf43-202ENST00000374165 PRM2P04554 102 aa12.8□□□□□ -0.36
C9orf43-202ENST00000374165 CTRLP40313 264 aa12.8□□□□□ -0.36
C9orf43-202ENST00000374165 LINC00310P59036 64 aa12.8□□□□□ -0.36
C9orf43-202ENST00000374165 SSTP61278 116 aa12.8□□□□□ -0.36
C9orf43-202ENST00000374165 MUC21Q5SSG8 566 aa12.8□□□□□ -0.36
C9orf43-202ENST00000374165 BORCS7Q96B45 105 aa12.8□□□□□ -0.36
C9orf43-202ENST00000374165 C7orf71A4D174 169 aa12.79□□□□□ -0.36
C9orf43-202ENST00000374165 K7EIL1 84 aa12.79□□□□□ -0.36
C9orf43-202ENST00000374165 AMBPP02760 352 aa12.79□□□□□ -0.36
C9orf43-202ENST00000374165 TSPOP30536 169 aa12.79□□□□□ -0.36
C9orf43-202ENST00000374165 LOC102724200A0A096LPH7 203 aaPredicted RBP12.79□□□□□ -0.36
C9orf43-202ENST00000374165 NUTF2P61970 127 aaKnown RBP12.79□□□□□ -0.36
C9orf43-202ENST00000374165 OR10J3Q5JRS4 329 aa12.79□□□□□ -0.36
C9orf43-202ENST00000374165 BAGE3Q86Y29 109 aa12.79□□□□□ -0.36
C9orf43-202ENST00000374165 OR10D4PQ8NGN7 298 aa12.79□□□□□ -0.36
C9orf43-202ENST00000374165 CSTL1Q9H114 145 aa12.79□□□□□ -0.36
C9orf43-202ENST00000374165 A0A1B0GW15 77 aa12.78□□□□□ -0.36
C9orf43-202ENST00000374165 SERF1AO75920 110 aa12.78□□□□□ -0.36
C9orf43-202ENST00000374165 GATD1Q8NB37 220 aa12.78□□□□□ -0.36
C9orf43-202ENST00000374165 CSNK1G2-AS1Q8NCQ2 148 aa12.78□□□□□ -0.36
C9orf43-202ENST00000374165 ALKBH7Q9BT30 221 aaPredicted RBP12.78□□□□□ -0.36
C9orf43-202ENST00000374165 TENM3Q9P273 2699 aa12.78□□□□□ -0.36
C9orf43-202ENST00000374165 PACRGQ96M98 296 aaPredicted RBP12.78□□□□□ -0.36
C9orf43-202ENST00000374165 C12orf57Q99622 126 aa12.78□□□□□ -0.36
C9orf43-202ENST00000374165 C1orf158Q8N1D5 194 aa12.77□□□□□ -0.37
C9orf43-202ENST00000374165 C18orf32Q8TCD1 76 aa12.77□□□□□ -0.37
C9orf43-202ENST00000374165 TRAV21A0A0B4J279 112 aa12.76□□□□□ -0.37
C9orf43-202ENST00000374165 RCHY1Q96PM5 261 aa12.76□□□□□ -0.37
C9orf43-202ENST00000374165 CNFNQ9BYD5 112 aa12.76□□□□□ -0.37
C9orf43-202ENST00000374165 A8MZ25 164 aa12.76□□□□□ -0.37
C9orf43-202ENST00000374165 SMIM6P0DI80 62 aa12.76□□□□□ -0.37
C9orf43-202ENST00000374165 NTF3P20783 257 aa12.76□□□□□ -0.37
C9orf43-202ENST00000374165 MORN3Q6PF18 240 aaPredicted RBP12.76□□□□□ -0.37
C9orf43-202ENST00000374165 ZNF493Q6ZR52 646 aa12.76□□□□□ -0.37
C9orf43-202ENST00000374165 NAGKQ9UJ70 344 aa12.76□□□□□ -0.37
C9orf43-202ENST00000374165 COL7A1Q02388 2944 aa12.75□□□□□ -0.37
C9orf43-202ENST00000374165 ESDP10768 282 aa12.75□□□□□ -0.37
C9orf43-202ENST00000374165 TWIST1Q15672 202 aa12.75□□□□□ -0.37
C9orf43-202ENST00000374165 IQCJQ1A5X6 159 aa12.75□□□□□ -0.37
C9orf43-202ENST00000374165 TMEM18Q96B42 140 aa12.75□□□□□ -0.37
C9orf43-202ENST00000374165 IGHV3OR16-12A0A075B7B8 117 aa12.74□□□□□ -0.37
C9orf43-202ENST00000374165 HTN1P15515 57 aa12.74□□□□□ -0.37
C9orf43-202ENST00000374165 MSRB1Q9NZV6 116 aa12.74□□□□□ -0.37
C9orf43-202ENST00000374165 INSP01308 110 aa12.74□□□□□ -0.37
C9orf43-202ENST00000374165 ANXA2RQ3ZCQ2 193 aa12.74□□□□□ -0.37
C9orf43-202ENST00000374165 PYY3Q5JQD4 70 aa12.74□□□□□ -0.37
C9orf43-202ENST00000374165 KIR2DL5BA0A0G2JN68 375 aa12.73□□□□□ -0.37
C9orf43-202ENST00000374165 KIR2DL5BA0A0G2JPC4 375 aa12.73□□□□□ -0.37
C9orf43-202ENST00000374165 DEFB121Q5J5C9 76 aa12.73□□□□□ -0.37
C9orf43-202ENST00000374165 KIR2DL5AQ8N109 375 aa12.73□□□□□ -0.37
C9orf43-202ENST00000374165 KIR2DL5BQ8NHK3 375 aa12.73□□□□□ -0.37
C9orf43-202ENST00000374165 GNRH2O43555 120 aa12.72□□□□□ -0.37
C9orf43-202ENST00000374165 DEFB135Q30KP9 77 aa12.72□□□□□ -0.37
C9orf43-202ENST00000374165 APOC4P55056 127 aa12.72□□□□□ -0.37
C9orf43-202ENST00000374165 OR10AG1Q8NH19 301 aa12.72□□□□□ -0.37
C9orf43-202ENST00000374165 LINC01587Q99440 93 aa12.72□□□□□ -0.37
C9orf43-202ENST00000374165 C1QTNF4Q9BXJ3 329 aa12.72□□□□□ -0.37
C9orf43-202ENST00000374165 MUC4Q99102 2169 aa12.72□□□□□ -0.37
C9orf43-202ENST00000374165 OR5AL1P0C617 328 aa12.71□□□□□ -0.37
C9orf43-202ENST00000374165 AMN1Q8IY45 258 aa12.71□□□□□ -0.37
C9orf43-202ENST00000374165 H3BVH4 76 aa12.71□□□□□ -0.38
C9orf43-202ENST00000374165 AZU1P20160 251 aa12.71□□□□□ -0.38
C9orf43-202ENST00000374165 FAM104BQ5XKR9 115 aa12.71□□□□□ -0.38
C9orf43-202ENST00000374165 FAM159AQ6UWV7 190 aa12.71□□□□□ -0.38
C9orf43-202ENST00000374165 ZNF705AQ6ZN79 300 aaPredicted RBP12.71□□□□□ -0.38
C9orf43-202ENST00000374165 TMEM208Q9BTX3 173 aa12.71□□□□□ -0.38
C9orf43-202ENST00000374165 SPRY2O43597 315 aa12.7□□□□□ -0.38
C9orf43-202ENST00000374165 SNAI2O43623 268 aa12.7□□□□□ -0.38
C9orf43-202ENST00000374165 TDRG1Q3Y452 100 aa12.7□□□□□ -0.38
C9orf43-202ENST00000374165 KCNS1Q96KK3 526 aa12.7□□□□□ -0.38
C9orf43-202ENST00000374165 PRKDCP78527 4128 aaKnown RBP12.7□□□□□ -0.38
C9orf43-202ENST00000374165 IGHV1OR15-1A0A075B7D0 117 aa12.69□□□□□ -0.38
C9orf43-202ENST00000374165 TMEM191AQ9H0A3 160 aa12.69□□□□□ -0.38
C9orf43-202ENST00000374165 SBSPONQ8IVN8 264 aa12.69□□□□□ -0.38
C9orf43-202ENST00000374165 MRAPQ8TCY5 172 aa12.69□□□□□ -0.38
C9orf43-202ENST00000374165 C20orf144Q9BQM9 153 aa12.69□□□□□ -0.38
C9orf43-202ENST00000374165 MDFICQ9P1T7 246 aa12.69□□□□□ -0.38
C9orf43-202ENST00000374165 URB1-AS1Q96HZ7 61 aa12.68□□□□□ -0.38
C9orf43-202ENST00000374165 SAMD10Q9BYL1 202 aa12.68□□□□□ -0.38
C9orf43-202ENST00000374165 ASIPP42127 132 aa12.67□□□□□ -0.38
C9orf43-202ENST00000374165 RETNQ9HD89 108 aa12.67□□□□□ -0.38
C9orf43-202ENST00000374165 TIMM8BQ9Y5J9 83 aaPredicted RBP12.67□□□□□ -0.38
C9orf43-202ENST00000374165 IGHV4-4A0A075B6R2 117 aa12.67□□□□□ -0.38
C9orf43-202ENST00000374165 CBY3A6NI87 242 aa12.67□□□□□ -0.38
C9orf43-202ENST00000374165 D6R8Y8 96 aa12.67□□□□□ -0.38
C9orf43-202ENST00000374165 S100A4P26447 101 aaKnown RBP12.67□□□□□ -0.38
C9orf43-202ENST00000374165 MRPL51Q4U2R6 128 aaKnown RBP12.67□□□□□ -0.38
C9orf43-202ENST00000374165 SPANXN1Q5VSR9 72 aa12.67□□□□□ -0.38
C9orf43-202ENST00000374165 DMRTA1Q5VZB9 504 aa12.67□□□□□ -0.38
C9orf43-202ENST00000374165 CDPF1Q6NVV7 123 aa12.67□□□□□ -0.38
C9orf43-202ENST00000374165 GOLT1BQ9Y3E0 138 aa12.67□□□□□ -0.38
C9orf43-202ENST00000374165 X6R8D5 127 aa12.67□□□□□ -0.38
C9orf43-202ENST00000374165 RNASE3P12724 160 aaKnown RBP12.66□□□□□ -0.38
C9orf43-202ENST00000374165 Q6ZWC4 215 aa12.66□□□□□ -0.38
C9orf43-202ENST00000374165 NIT1Q86X76 327 aa12.66□□□□□ -0.38
C9orf43-202ENST00000374165 NIT2Q9NQR4 276 aa12.66□□□□□ -0.38
C9orf43-202ENST00000374165 U3KQK5 164 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms