RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 SLC35B3Q9H1N7 401 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 BOD1L1Q8NFC6 3051 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 COL6A6A6NMZ7 2263 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 IGHV4-4A0A075B6R2 117 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 EGFEM1PQ0D2K5 195 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 SLC39A9Q9NUM3 307 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 HEATR1Q9H583 2144 aaKnown RBP2.82□□□□□ -1.96
MCF2-203ENST00000370576 AGPAT2O15120 278 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 NDUFC2O95298 119 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 LTAP01374 205 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 SLC25A5P05141 298 aaKnown RBP2.82□□□□□ -1.96
MCF2-203ENST00000370576 CRYGAP11844 174 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 CRYBB3P26998 211 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 ZNF80P51504 273 aaPredicted RBP2.82□□□□□ -1.96
MCF2-203ENST00000370576 EMP1P54849 157 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 TEX43Q6ZNM6 134 aa2.82□□□□□ -1.96
MCF2-203ENST00000370576 FP248Q71RG6 208 aaPredicted RBP2.82□□□□□ -1.96
MCF2-203ENST00000370576 ZGRF1Q86YA3 2104 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 TRAV8-6A0A0B4J262 113 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 hDV102S1A0JD36 115 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 MT-ND4LP03901 98 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 MSMBP08118 114 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 KLRD1Q13241 179 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 VMA21Q3ZAQ7 101 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 ALKAL2Q6UX46 152 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 CLEC19AQ6UXS0 136 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 GPHB5Q86YW7 130 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 SHANK2-AS3Q9BTD1 123 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 SMAD5-AS1Q9Y6J3 95 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 IGHV4-30-2A0A087WSY4 118 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 SMIM27A0A1W2PRY6 76 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 C17orf112F2Z3M2 114 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 K7EQD1 137 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 DPM2O94777 84 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 Q6ZUT4 128 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 ZNF329Q86UD4 541 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 VSIG2Q96IQ7 327 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 GFRA4Q9GZZ7 299 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 U3KQK5 164 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 PRKDCP78527 4128 aaKnown RBP2.81□□□□□ -1.96
MCF2-203ENST00000370576 TRBV20OR9-2A0A075B6H5 130 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 IGHV1OR15-1A0A075B7D0 117 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 TRBV7-1A0A0A6YYK4 115 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 IGHV3-43A0A0B4J1X8 118 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 IGHV3-43DP0DP04 118 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 FOXI1Q12951 378 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 PEA15Q15121 130 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 BATFQ16520 125 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 TEX29Q8N6K0 151 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 OR10P1Q8NGE3 313 aa2.81□□□□□ -1.96
MCF2-203ENST00000370576 OTOGQ6ZRI0 2925 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 B4DSR2 109 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 CTSGP08311 255 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 RBMY1CP0DJD4 496 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 TMEM183BQ1AE95 376 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 MEIG1Q5JSS6 88 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 BPESC1Q9GZL8 116 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 MOB4Q9Y3A3 225 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 LINC00588Q9Y4M8 146 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 LENEPQ9Y5L5 61 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 MALRD1Q5VYJ5 2156 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 LRBAP50851 2863 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 M0R2Z0 102 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 IGHV3-48P01763 117 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 SFTA3P0C7M3 94 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 GNB1P62873 340 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 HERVK_113P63121 156 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 CCL19Q99731 98 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 PBDC1Q9BVG4 233 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 MRPS16Q9Y3D3 137 aaKnown RBP2.8□□□□□ -1.96
MCF2-203ENST00000370576 PXMP4Q9Y6I8 212 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 KIAA2026Q5HYC2 2103 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 CACNA1DQ01668 2161 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 GCHFRP30047 84 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 SRP14P37108 136 aaKnown RBP2.8□□□□□ -1.96
MCF2-203ENST00000370576 ERVK-16P61578 105 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 SVBPQ8N300 66 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 LINC00526Q96FQ7 95 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 USMG5Q96IX5 58 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 KCNS1Q96KK3 526 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 HIST1H2BLQ99880 126 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 DERL1Q9BUN8 251 aa2.8□□□□□ -1.96
MCF2-203ENST00000370576 ZNF471Q9BX82 626 aaPredicted RBP2.8□□□□□ -1.96
MCF2-203ENST00000370576 TRAV8-3A0A0A6YYJ7 113 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 TRAV41A0A0B4J266 112 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 ELOBQ15370 118 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 C6orf99Q4VX62 202 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 FAM168AQ92567 244 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 LEAP2Q969E1 77 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 WWC2-AS2Q96NR7 200 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 DYNLRB1Q9NP97 96 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 SCRT2Q9NQ03 307 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 OSTCQ9NRP0 149 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 TMEM167BQ9NRX6 74 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 V9GYV3 84 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 CELSR2Q9HCU4 2923 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 M0R381 172 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 MT-ATP8P03928 68 aa2.79□□□□□ -1.96
MCF2-203ENST00000370576 RPL27AP46776 148 aaKnown RBP2.79□□□□□ -1.96
MCF2-203ENST00000370576 ADAMTSL4-AS1Q5T5F5 129 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms