RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ETDCA0A1B0GVM5 59 aa6.66□□□□□ -1.34
ABCA4-201ENST00000370225 PRB2P02812 416 aaPredicted RBP6.66□□□□□ -1.34
ABCA4-201ENST00000370225 SMIM20Q8N5G0 67 aa6.66□□□□□ -1.34
ABCA4-201ENST00000370225 TRAV4A0A0B4J268 109 aa6.66□□□□□ -1.34
ABCA4-201ENST00000370225 FAM231BA6NCW3 169 aa6.66□□□□□ -1.34
ABCA4-201ENST00000370225 CT83Q5H943 113 aa6.66□□□□□ -1.34
ABCA4-201ENST00000370225 CHD3Q12873 2000 aaKnown RBP6.65□□□□□ -1.34
ABCA4-201ENST00000370225 PYY3Q5JQD4 70 aa6.65□□□□□ -1.34
ABCA4-201ENST00000370225 POLR3KQ9Y2Y1 108 aaPredicted RBP6.65□□□□□ -1.34
ABCA4-201ENST00000370225 J3QQQ9 107 aa6.65□□□□□ -1.34
ABCA4-201ENST00000370225 IGFL2Q6UWQ7 119 aa6.65□□□□□ -1.34
ABCA4-201ENST00000370225 FGF23Q9GZV9 251 aaPredicted RBP6.65□□□□□ -1.34
ABCA4-201ENST00000370225 HHLA3Q9XRX5 114 aa6.65□□□□□ -1.34
ABCA4-201ENST00000370225 A8MWP6 167 aa6.65□□□□□ -1.34
ABCA4-201ENST00000370225 K7EN84 100 aa6.65□□□□□ -1.34
ABCA4-201ENST00000370225 NCR3O14931 201 aa6.65□□□□□ -1.34
ABCA4-201ENST00000370225 LTAP01374 205 aa6.65□□□□□ -1.34
ABCA4-201ENST00000370225 MED13Q9UHV7 2174 aa6.65□□□□□ -1.34
ABCA4-201ENST00000370225 TRAV13-2A0A0B4J235 113 aa6.65□□□□□ -1.35
ABCA4-201ENST00000370225 SMAD5-AS1Q9Y6J3 95 aa6.65□□□□□ -1.35
ABCA4-201ENST00000370225 DNAJC9-AS1A6NH13 148 aa6.65□□□□□ -1.35
ABCA4-201ENST00000370225 UBL5Q9BZL1 73 aa6.65□□□□□ -1.35
ABCA4-201ENST00000370225 PLCE1Q9P212 2302 aa6.65□□□□□ -1.35
ABCA4-201ENST00000370225 C2orf70A6NJV1 201 aa6.65□□□□□ -1.35
ABCA4-201ENST00000370225 KLK5Q9Y337 293 aaPredicted RBP6.65□□□□□ -1.35
ABCA4-201ENST00000370225 INAFM1C9JVW0 142 aa6.64□□□□□ -1.35
ABCA4-201ENST00000370225 PKIGQ9Y2B9 76 aa6.64□□□□□ -1.35
ABCA4-201ENST00000370225 UBE2AP49459 152 aa6.64□□□□□ -1.35
ABCA4-201ENST00000370225 PCNX2A6NKB5 2137 aa6.64□□□□□ -1.35
ABCA4-201ENST00000370225 Q0VG73 95 aa6.64□□□□□ -1.35
ABCA4-201ENST00000370225 DEFB125Q8N687 156 aa6.64□□□□□ -1.35
ABCA4-201ENST00000370225 CARD19Q96LW7 228 aa6.64□□□□□ -1.35
ABCA4-201ENST00000370225 TRBV12-3P01733 135 aa6.64□□□□□ -1.35
ABCA4-201ENST00000370225 SLC25A29Q8N8R3 303 aa6.64□□□□□ -1.35
ABCA4-201ENST00000370225 CLPSL1A2RUU4 121 aa6.64□□□□□ -1.35
ABCA4-201ENST00000370225 Q8N9W7 124 aa6.64□□□□□ -1.35
ABCA4-201ENST00000370225 C4orf3Q8WVX3 66 aa6.64□□□□□ -1.35
ABCA4-201ENST00000370225 ZFHX2Q9C0A1 2572 aaPredicted RBP6.63□□□□□ -1.35
ABCA4-201ENST00000370225 C19orf84I3L1E1 186 aa6.63□□□□□ -1.35
ABCA4-201ENST00000370225 INAFM2P0DMQ5 153 aa6.63□□□□□ -1.35
ABCA4-201ENST00000370225 SEM1Q6ZVN7 128 aa6.63□□□□□ -1.35
ABCA4-201ENST00000370225 CEND1Q8N111 149 aa6.63□□□□□ -1.35
ABCA4-201ENST00000370225 COX7A2LO14548 114 aa6.63□□□□□ -1.35
ABCA4-201ENST00000370225 RNF138Q8WVD3 245 aa6.63□□□□□ -1.35
ABCA4-201ENST00000370225 FANCD2OSQ96PS1 177 aa6.63□□□□□ -1.35
ABCA4-201ENST00000370225 ZNF106Q9H2Y7 1883 aaKnown RBP6.63□□□□□ -1.35
ABCA4-201ENST00000370225 I3L2K1 104 aa6.63□□□□□ -1.35
ABCA4-201ENST00000370225 F8VRH5 84 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 Q8N1Y9 231 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 A0A0U1RQV1 116 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 LRCOL1A6NCL2 159 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 PLA2G5P39877 138 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 Q6ZWC4 215 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 C20orf78Q9BR46 151 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 PLXNB3Q9ULL4 1909 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 K7EIM0 57 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 DAND5Q8N907 189 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 BRK1Q8WUW1 75 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 MALRD1Q5VYJ5 2156 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 COL4A3Q01955 1670 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 TMEM131Q92545 1883 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 PRO1854Q9UHT4 67 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 Q8N7P7 452 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 TRACP01848 142 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 CTSGP08311 255 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 C8orf31Q8N9H6 132 aa6.62□□□□□ -1.35
ABCA4-201ENST00000370225 IGLV11-55A0A075B6I3 123 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 PRAC2D3DTV9 90 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 IGLV3-1P01715 115 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 CFPP27918 469 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 KLK12Q9UKR0 248 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 C15orf53Q8NAA6 179 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 CACNA1HO95180 2353 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 UBE2V1Q13404 147 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 C16orf54Q6UWD8 224 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 FAM110AQ9BQ89 295 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 RETNQ9HD89 108 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 RBAKDNA6NC62 111 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 IGF2-ASQ6U949 168 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 MSRB1Q9NZV6 116 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 C4orf48Q5BLP8 95 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 C9orf47Q6ZRZ4 202 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 FAM231DQ6ZW35 169 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 Q8NA96 180 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 COX7B2Q8TF08 81 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 SHANK1Q9Y566 2161 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 PRR20EP86478 221 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 PRR20CP86479 221 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 PRR20DP86480 221 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 PRR20BP86481 221 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 PRR20AP86496 221 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 PRORYQ9H606 182 aa6.61□□□□□ -1.35
ABCA4-201ENST00000370225 VPREB1P12018 145 aa6.6□□□□□ -1.35
ABCA4-201ENST00000370225 DAZAP2Q15038 168 aaPredicted RBP6.6□□□□□ -1.35
ABCA4-201ENST00000370225 K7EMI3 77 aa6.6□□□□□ -1.35
ABCA4-201ENST00000370225 DLEU1O43261 78 aa6.6□□□□□ -1.35
ABCA4-201ENST00000370225 MED13LQ71F56 2210 aa6.6□□□□□ -1.35
ABCA4-201ENST00000370225 DAZ2Q13117 558 aaKnown RBP6.6□□□□□ -1.35
ABCA4-201ENST00000370225 LGALS9BQ3B8N2 356 aa6.6□□□□□ -1.35
ABCA4-201ENST00000370225 LGALS9CQ6DKI2 356 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms